EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000074698 (Gene tree)
Gene ID: 12995
Gene Symbol: Csnk2a1
Alias: CK2|Csnk2a1-rs4
Full Name: casein kinase 2%2C alpha 1 polypeptide
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 55014
Position: chr2: 152226839-152281852
Accession: 88543
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000133119	-	466	-	ENSMUSP00000116853	77 (aa)	-	Q6NSS6
ENSMUST00000136063	-	1559	-	-	- (aa)	-	-
ENSMUST00000099224	-	4206	XM_006498657	ENSMUSP00000096829	391 (aa)	XP_006498720	Q60737
ENSMUST00000141597	-	2520	-	-	- (aa)	-	-
ENSMUST00000124791	-	600	-	ENSMUSP00000122505	131 (aa)	-	A2ANR6

Gene Model

Click here to download ENSMUSG00000074698's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03008	Ribosome biogenesis in eukaryotes	KEGG
mmu04064	NF-kappa B signaling pathway	KEGG
mmu04137	Mitophagy - animal	KEGG
mmu04310	Wnt signaling pathway	KEGG
mmu04520	Adherens junction	KEGG
mmu05162	Measles	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000074698's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000074698	Csnk2a1	87	81.765	WBGene00002191	kin-3	99	79.155	Caenorhabditis_elegans
ENSMUSG00000074698	Csnk2a1	84	88.685	FBgn0264492	CkIIalpha	97	88.685	Drosophila_melanogaster
ENSMUSG00000074698	Csnk2a1	88	82.997	ENSMUSG00000046707	Csnk2a2	99	82.997	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000785	chromatin	-	ISO	Component
GO:0004674	protein serine/threonine kinase activity	-	ISO	Function
GO:0005515	protein binding	12432063.15284227.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005956	protein kinase CK2 complex	-	ISO	Component
GO:0005956	protein kinase CK2 complex	12432063.	TAS	Component
GO:0006468	protein phosphorylation	12432063.15284227.18191828.	IDA	Process
GO:0006468	protein phosphorylation	-	ISO	Process
GO:0008013	beta-catenin binding	12432063.	IDA	Function
GO:0008284	positive regulation of cell proliferation	-	ISO	Process
GO:0016301	kinase activity	15284227.	IDA	Function
GO:0016301	kinase activity	-	ISO	Function
GO:0016580	Sin3 complex	-	ISO	Component
GO:0016581	NuRD complex	-	ISO	Component
GO:0018105	peptidyl-serine phosphorylation	-	ISO	Process
GO:0018107	peptidyl-threonine phosphorylation	-	ISO	Process
GO:0019888	protein phosphatase regulator activity	15284227.	IDA	Function
GO:0030177	positive regulation of Wnt signaling pathway	-	ISO	Process
GO:0030307	positive regulation of cell growth	-	ISO	Process
GO:0031519	PcG protein complex	-	ISO	Component
GO:0042802	identical protein binding	-	ISO	Function
GO:0043021	ribonucleoprotein complex binding	-	ISO	Function
GO:0043154	negative regulation of cysteine-type endopeptidase activity involved in apoptotic process	-	ISO	Process
GO:0045732	positive regulation of protein catabolic process	-	ISO	Process
GO:0046777	protein autophosphorylation	18191828.	IDA	Process
GO:0047485	protein N-terminus binding	-	ISO	Function
GO:1903076	regulation of protein localization to plasma membrane	-	ISO	Process
GO:1905818	regulation of chromosome separation	-	ISO	Process
GO:2000059	negative regulation of ubiquitin-dependent protein catabolic process	-	ISO	Process