EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000074781 (Gene tree)
Gene ID: 93765
Gene Symbol: Ube2n
Alias: UBC13
Full Name: ubiquitin-conjugating enzyme E2N
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 30513
Position: chr10: 95515145-95545657
Accession: 1934835
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000099329	-	3867	-	ENSMUSP00000096932	152 (aa)	-	P61089
ENSMUST00000217757	-	330	-	-	- (aa)	-	-
ENSMUST00000220428	-	512	-	-	- (aa)	-	-
ENSMUST00000220127	-	1103	-	ENSMUSP00000151850	87 (aa)	-	A0A1W2P7Z3
ENSMUST00000219741	-	759	-	-	- (aa)	-	-
ENSMUST00000219381	-	699	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000074781's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000074781's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000151	ubiquitin ligase complex	-	ISO	Component
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000724	double-strand break repair via homologous recombination	-	ISO	Process
GO:0000729	DNA double-strand break processing	-	ISO	Process
GO:0001650	fibrillar center	-	ISO	Component
GO:0004842	ubiquitin-protein transferase activity	-	ISO	Function
GO:0005515	protein binding	12039045.22424771.23776175.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	15383616.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006281	DNA repair	-	IEA	Process
GO:0006301	postreplication repair	21873635.	IBA	Process
GO:0006301	postreplication repair	-	ISO	Process
GO:0006511	ubiquitin-dependent protein catabolic process	12039045.	IDA	Process
GO:0006974	cellular response to DNA damage stimulus	-	IEA	Process
GO:0016567	protein ubiquitination	-	ISO	Process
GO:0016574	histone ubiquitination	-	ISO	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0031058	positive regulation of histone modification	-	ISO	Process
GO:0031372	UBC13-MMS2 complex	-	ISO	Component
GO:0031625	ubiquitin protein ligase binding	-	ISO	Function
GO:0032991	protein-containing complex	22797923.	ISO	Component
GO:0033182	regulation of histone ubiquitination	-	ISO	Process
GO:0035370	UBC13-UEV1A complex	-	ISO	Component
GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	-	ISO	Process
GO:0043130	ubiquitin binding	-	ISO	Function
GO:0045739	positive regulation of DNA repair	-	ISO	Process
GO:0050852	T cell receptor signaling pathway	-	ISO	Process
GO:0050852	T cell receptor signaling pathway	15125833.	ISS	Process
GO:0051092	positive regulation of NF-kappaB transcription factor activity	-	ISO	Process
GO:0051092	positive regulation of NF-kappaB transcription factor activity	14695475.	ISS	Process
GO:0051443	positive regulation of ubiquitin-protein transferase activity	-	ISO	Process
GO:0061631	ubiquitin conjugating enzyme activity	21873635.	IBA	Function
GO:0061631	ubiquitin conjugating enzyme activity	22424771.28039360.	IDA	Function
GO:0061631	ubiquitin conjugating enzyme activity	12039045.22797923.	IDA	Function
GO:0061631	ubiquitin conjugating enzyme activity	14406273.	IGI	Function
GO:0070534	protein K63-linked ubiquitination	21873635.	IBA	Process
GO:0070534	protein K63-linked ubiquitination	22424771.28039360.	IDA	Process
GO:0070534	protein K63-linked ubiquitination	-	ISO	Process