EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000075598 (Gene tree)
Gene ID: 622486
Gene Symbol: Smok3c
Alias: EG622486
Full Name: sperm motility kinase 3C
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 13344 bases
Position: chr5:138053194-138066537
Accession: 3647925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000140749	RIO1	PF01163.22	3e-07	1	1
ENSMUSP00000141020	RIO1	PF01163.22	3e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000110967	-	2330	XM_017321053	ENSMUSP00000141020	504 (aa)	XP_017176542	A0A087WSF2
ENSMUST00000178402	-	1515	-	ENSMUSP00000140749	504 (aa)	-	A0A087WSF2

Gene Model

Click here to download ENSMUSG00000075598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000075598's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000075598	Smok3c	100	96.032	ENSMUSG00000075599	Smok3a	100	96.032
ENSMUSG00000075598	Smok3c	54	39.630	ENSMUSG00000109396	Gm4565	90	39.630
ENSMUSG00000075598	Smok3c	57	38.062	ENSMUSG00000095976	Gm5891	92	38.062
ENSMUSG00000075598	Smok3c	100	96.032	ENSMUSG00000079156	Smok3b	100	96.032
ENSMUSG00000075598	Smok3c	96	50.410	ENSMUSG00000101361	Gm7356	97	50.101
ENSMUSG00000075598	Smok3c	96	48.770	ENSMUSG00000067941	Gm7168	97	48.479
ENSMUSG00000075598	Smok3c	100	83.135	ENSMUSG00000073458	Smok2a	100	83.135
ENSMUSG00000075598	Smok3c	96	86.157	ENSMUSG00000073457	Smok2b	100	86.157
ENSMUSG00000075598	Smok3c	53	39.700	ENSMUSG00000095190	Gm10668	89	39.700
ENSMUSG00000075598	Smok3c	57	38.062	ENSMUSG00000095683	Gm10662	92	38.062
ENSMUSG00000075598	Smok3c	57	38.408	ENSMUSG00000109516	Gm6882	92	38.408
ENSMUSG00000075598	Smok3c	97	39.200	ENSMUSG00000044624	Gm4922	98	39.200
ENSMUSG00000075598	Smok3c	53	39.326	ENSMUSG00000101436	Gm5157	89	39.326
ENSMUSG00000075598	Smok3c	53	39.700	ENSMUSG00000094682	Gm6902	89	39.700
ENSMUSG00000075598	Smok3c	54	39.630	ENSMUSG00000109060	Gm4513	90	39.630
ENSMUSG00000075598	Smok3c	53	39.700	ENSMUSG00000096283	Gm6176	89	39.700
ENSMUSG00000075598	Smok3c	51	33.453	ENSMUSG00000032380	Dapk2	75	33.453
ENSMUSG00000075598	Smok3c	53	39.700	ENSMUSG00000095363	Gm4567	89	39.700
ENSMUSG00000075598	Smok3c	95	50.309	ENSMUSG00000101307	Gm7358	95	50.309

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000075598	Smok3c	55	42.657	ENSBTAG00000052622	-	89	42.657	Bos_taurus
ENSMUSG00000075598	Smok3c	65	36.747	ENSCPOG00000033321	-	54	36.747	Cavia_porcellus
ENSMUSG00000075598	Smok3c	62	38.217	ENSCPOG00000034310	-	95	38.217	Cavia_porcellus
ENSMUSG00000075598	Smok3c	57	39.333	ENSCING00000008201	-	88	39.333	Ciona_intestinalis
ENSMUSG00000075598	Smok3c	96	57.260	ENSCGRG00001007918	-	98	57.260	Cricetulus_griseus_chok1gshd
ENSMUSG00000075598	Smok3c	95	44.008	ENSCGRG00001006023	Gm4922	95	44.008	Cricetulus_griseus_chok1gshd
ENSMUSG00000075598	Smok3c	96	55.350	ENSCGRG00001010553	-	96	55.350	Cricetulus_griseus_chok1gshd
ENSMUSG00000075598	Smok3c	95	44.008	ENSCGRG00000009530	Gm4922	95	44.008	Cricetulus_griseus_crigri
ENSMUSG00000075598	Smok3c	69	39.886	ENSFDAG00000016208	-	78	39.886	Fukomys_damarensis
ENSMUSG00000075598	Smok3c	96	83.471	MGP_CAROLIEiJ_G0021082	-	100	83.471	Mus_caroli
ENSMUSG00000075598	Smok3c	96	83.471	MGP_CAROLIEiJ_G0021080	-	100	83.471	Mus_caroli
ENSMUSG00000075598	Smok3c	96	83.471	MGP_CAROLIEiJ_G0021081	-	100	83.471	Mus_caroli
ENSMUSG00000075598	Smok3c	95	41.889	MGP_CAROLIEiJ_G0015144	Gm4922	95	41.889	Mus_caroli
ENSMUSG00000075598	Smok3c	96	83.471	MGP_CAROLIEiJ_G0021079	-	100	83.471	Mus_caroli
ENSMUSG00000075598	Smok3c	92	40.546	MGP_PahariEiJ_G0023763	Gm4922	93	40.546	Mus_pahari
ENSMUSG00000075598	Smok3c	97	40.161	MGP_SPRETEiJ_G0015952	Gm4922	98	40.161	Mus_spretus
ENSMUSG00000075598	Smok3c	95	48.140	ENSNGAG00000008026	-	95	48.140	Nannospalax_galili
ENSMUSG00000075598	Smok3c	50	39.841	ENSOGAG00000033945	-	94	39.535	Otolemur_garnettii
ENSMUSG00000075598	Smok3c	98	53.846	ENSPEMG00000022024	-	98	56.995	Peromyscus_maniculatus_bairdii
ENSMUSG00000075598	Smok3c	100	51.881	ENSRNOG00000052093	Smok2a	100	51.881	Rattus_norvegicus
ENSMUSG00000075598	Smok3c	92	42.151	ENSRNOG00000025799	RGD1560303	91	42.151	Rattus_norvegicus
ENSMUSG00000075598	Smok3c	97	47.390	ENSRNOG00000030145	RGD1561667	97	47.390	Rattus_norvegicus
ENSMUSG00000075598	Smok3c	99	50.898	ENSRNOG00000059551	RGD1560718	99	50.898	Rattus_norvegicus
ENSMUSG00000075598	Smok3c	100	54.455	ENSRNOG00000024200	LOC690235	100	54.455	Rattus_norvegicus
ENSMUSG00000075598	Smok3c	57	36.207	ENSRNOG00000028913	AABR07028872.1	92	36.207	Rattus_norvegicus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004674	protein serine/threonine kinase activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006468	protein phosphorylation	21873635.	IBA	Process
GO:0035556	intracellular signal transduction	21873635.	IBA	Process