EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000075600 (Gene tree)
Gene ID: 223642
Gene Symbol: Zc3h3
Alias: Smicl
Full Name: zinc finger CCCH type containing 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 87486 bases
Position: chr15:75754430-75841915
Accession: 2663721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000098106	zf-CCCH	PF00642.24	1.4e-17	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000229970	-	809	-	-	- (aa)	-	-
ENSMUST00000229000	-	572	-	-	- (aa)	-	-
ENSMUST00000100538	-	3362	XM_011245566	ENSMUSP00000098106	950 (aa)	XP_011243868	Q8CHP0

Gene Model

Click here to download ENSMUSG00000075600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000075600's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000075600	Zc3h3	100	70.471	ENSG00000014164	ZC3H3	100	70.471	Homo_sapiens
ENSMUSG00000075600	Zc3h3	64	41.802	ENSAPOG00000011522	zc3h3	92	34.615	Acanthochromis_polyacanthus
ENSMUSG00000075600	Zc3h3	63	42.529	ENSACIG00000005563	zc3h3	67	41.837	Amphilophus_citrinellus
ENSMUSG00000075600	Zc3h3	73	39.082	ENSAOCG00000013763	zc3h3	71	41.889	Amphiprion_ocellaris
ENSMUSG00000075600	Zc3h3	63	41.818	ENSAPEG00000020037	zc3h3	88	41.929	Amphiprion_percula
ENSMUSG00000075600	Zc3h3	86	34.078	ENSATEG00000003718	zc3h3	61	42.243	Anabas_testudineus
ENSMUSG00000075600	Zc3h3	100	70.146	ENSANAG00000018742	ZC3H3	100	70.772	Aotus_nancymaae
ENSMUSG00000075600	Zc3h3	63	43.678	ENSACLG00000023035	zc3h3	65	43.680	Astatotilapia_calliptera
ENSMUSG00000075600	Zc3h3	91	66.780	ENSBTAG00000021472	ZC3H3	99	66.780	Bos_taurus
ENSMUSG00000075600	Zc3h3	100	70.146	ENSCJAG00000021439	ZC3H3	100	70.637	Callithrix_jacchus
ENSMUSG00000075600	Zc3h3	87	65.497	ENSCAFG00000001299	ZC3H3	100	67.333	Canis_familiaris
ENSMUSG00000075600	Zc3h3	99	66.285	ENSCAFG00020018654	ZC3H3	100	67.430	Canis_lupus_dingo
ENSMUSG00000075600	Zc3h3	100	65.833	ENSCHIG00000018027	ZC3H3	100	65.417	Capra_hircus
ENSMUSG00000075600	Zc3h3	100	70.405	ENSTSYG00000034906	ZC3H3	100	70.490	Carlito_syrichta
ENSMUSG00000075600	Zc3h3	97	64.309	ENSCAPG00000013918	ZC3H3	100	65.484	Cavia_aperea
ENSMUSG00000075600	Zc3h3	100	70.637	ENSCPOG00000006248	ZC3H3	99	70.115	Cavia_porcellus
ENSMUSG00000075600	Zc3h3	100	70.890	ENSCCAG00000035267	ZC3H3	100	70.785	Cebus_capucinus
ENSMUSG00000075600	Zc3h3	100	70.324	ENSCATG00000020900	ZC3H3	100	70.157	Cercocebus_atys
ENSMUSG00000075600	Zc3h3	100	70.251	ENSCLAG00000009999	ZC3H3	99	69.729	Chinchilla_lanigera
ENSMUSG00000075600	Zc3h3	100	69.801	ENSCSAG00000009074	ZC3H3	99	69.843	Chlorocebus_sabaeus
ENSMUSG00000075600	Zc3h3	100	44.248	ENSCPBG00000019050	ZC3H3	89	47.471	Chrysemys_picta_bellii
ENSMUSG00000075600	Zc3h3	100	68.580	ENSCANG00000032420	ZC3H3	100	68.757	Colobus_angolensis_palliatus
ENSMUSG00000075600	Zc3h3	100	85.774	ENSCGRG00001016268	Zc3h3	100	85.669	Cricetulus_griseus_chok1gshd
ENSMUSG00000075600	Zc3h3	100	85.774	ENSCGRG00000012889	Zc3h3	100	85.669	Cricetulus_griseus_crigri
ENSMUSG00000075600	Zc3h3	61	41.825	ENSCSEG00000002583	zc3h3	70	42.235	Cynoglossus_semilaevis
ENSMUSG00000075600	Zc3h3	87	61.492	ENSDNOG00000031054	ZC3H3	96	62.948	Dasypus_novemcinctus
ENSMUSG00000075600	Zc3h3	98	66.419	ENSDORG00000023832	Zc3h3	100	67.521	Dipodomys_ordii
ENSMUSG00000075600	Zc3h3	71	54.525	ENSETEG00000014836	-	63	71.552	Echinops_telfairi
ENSMUSG00000075600	Zc3h3	100	68.107	ENSEASG00005009621	ZC3H3	99	68.763	Equus_asinus_asinus
ENSMUSG00000075600	Zc3h3	81	70.634	ENSECAG00000012556	ZC3H3	86	70.634	Equus_caballus
ENSMUSG00000075600	Zc3h3	92	59.367	ENSEEUG00000007986	ZC3H3	91	59.367	Erinaceus_europaeus
ENSMUSG00000075600	Zc3h3	100	69.127	ENSFCAG00000013238	ZC3H3	100	69.479	Felis_catus
ENSMUSG00000075600	Zc3h3	81	52.273	ENSFALG00000009538	ZC3H3	86	46.566	Ficedula_albicollis
ENSMUSG00000075600	Zc3h3	100	68.574	ENSFDAG00000017737	ZC3H3	99	68.548	Fukomys_damarensis
ENSMUSG00000075600	Zc3h3	62	43.822	ENSFHEG00000017714	zc3h3	63	43.629	Fundulus_heteroclitus
ENSMUSG00000075600	Zc3h3	99	70.074	ENSGGOG00000002833	ZC3H3	100	70.075	Gorilla_gorilla
ENSMUSG00000075600	Zc3h3	63	43.678	ENSHBUG00000004627	zc3h3	65	43.678	Haplochromis_burtoni
ENSMUSG00000075600	Zc3h3	100	70.093	ENSHGLG00000011234	ZC3H3	99	69.760	Heterocephalus_glaber_female
ENSMUSG00000075600	Zc3h3	91	67.950	ENSHGLG00100006782	ZC3H3	97	67.950	Heterocephalus_glaber_male
ENSMUSG00000075600	Zc3h3	72	40.952	ENSHCOG00000006579	zc3h3	54	48.092	Hippocampus_comes
ENSMUSG00000075600	Zc3h3	84	33.675	ENSIPUG00000006438	zc3h3	91	33.597	Ictalurus_punctatus
ENSMUSG00000075600	Zc3h3	100	70.894	ENSSTOG00000004358	ZC3H3	99	70.760	Ictidomys_tridecemlineatus
ENSMUSG00000075600	Zc3h3	100	74.713	ENSJJAG00000023757	Zc3h3	100	74.608	Jaculus_jaculus
ENSMUSG00000075600	Zc3h3	69	44.444	ENSKMAG00000017876	zc3h3	91	45.525	Kryptolebias_marmoratus
ENSMUSG00000075600	Zc3h3	77	40.976	ENSLOCG00000008621	ZC3H3	58	45.057	Lepisosteus_oculatus
ENSMUSG00000075600	Zc3h3	100	70.219	ENSMFAG00000036060	ZC3H3	100	70.262	Macaca_fascicularis
ENSMUSG00000075600	Zc3h3	100	69.874	ENSMNEG00000029433	ZC3H3	99	69.916	Macaca_nemestrina
ENSMUSG00000075600	Zc3h3	100	69.906	ENSMLEG00000038139	ZC3H3	100	69.948	Mandrillus_leucophaeus
ENSMUSG00000075600	Zc3h3	52	43.545	ENSMAMG00000014787	zc3h3	52	44.084	Mastacembelus_armatus
ENSMUSG00000075600	Zc3h3	63	43.678	ENSMZEG00005017290	zc3h3	65	43.678	Maylandia_zebra
ENSMUSG00000075600	Zc3h3	100	85.759	ENSMAUG00000011009	Zc3h3	100	85.864	Mesocricetus_auratus
ENSMUSG00000075600	Zc3h3	100	71.234	ENSMICG00000001100	ZC3H3	100	70.576	Microcebus_murinus
ENSMUSG00000075600	Zc3h3	100	84.817	ENSMOCG00000000733	Zc3h3	100	84.921	Microtus_ochrogaster
ENSMUSG00000075600	Zc3h3	69	38.843	ENSMMOG00000016823	zc3h3	92	32.831	Mola_mola
ENSMUSG00000075600	Zc3h3	85	59.538	ENSMODG00000011385	ZC3H3	94	58.531	Monodelphis_domestica
ENSMUSG00000075600	Zc3h3	68	40.000	ENSMALG00000014610	zc3h3	52	44.551	Monopterus_albus
ENSMUSG00000075600	Zc3h3	100	96.842	MGP_CAROLIEiJ_G0019897	Zc3h3	100	96.842	Mus_caroli
ENSMUSG00000075600	Zc3h3	100	94.676	MGP_PahariEiJ_G0019905	Zc3h3	100	94.990	Mus_pahari
ENSMUSG00000075600	Zc3h3	100	99.158	MGP_SPRETEiJ_G0020797	Zc3h3	100	99.158	Mus_spretus
ENSMUSG00000075600	Zc3h3	91	68.397	ENSMPUG00000008357	ZC3H3	97	68.182	Mustela_putorius_furo
ENSMUSG00000075600	Zc3h3	100	80.460	ENSNGAG00000008574	Zc3h3	100	80.564	Nannospalax_galili
ENSMUSG00000075600	Zc3h3	63	43.678	ENSNBRG00000005454	zc3h3	87	36.180	Neolamprologus_brichardi
ENSMUSG00000075600	Zc3h3	100	67.537	ENSNLEG00000001681	ZC3H3	100	68.372	Nomascus_leucogenys
ENSMUSG00000075600	Zc3h3	84	58.148	ENSMEUG00000008554	ZC3H3	86	58.148	Notamacropus_eugenii
ENSMUSG00000075600	Zc3h3	100	69.343	ENSODEG00000014239	ZC3H3	100	68.958	Octodon_degus
ENSMUSG00000075600	Zc3h3	61	43.643	ENSORLG00000026930	zc3h3	69	44.571	Oryzias_latipes
ENSMUSG00000075600	Zc3h3	61	43.619	ENSORLG00020002734	zc3h3	72	42.803	Oryzias_latipes_hni
ENSMUSG00000075600	Zc3h3	60	43.580	ENSORLG00015001257	zc3h3	72	43.725	Oryzias_latipes_hsok
ENSMUSG00000075600	Zc3h3	100	69.279	ENSOGAG00000014907	ZC3H3	100	69.407	Otolemur_garnettii
ENSMUSG00000075600	Zc3h3	100	64.736	ENSOARG00000000808	ZC3H3	100	64.876	Ovis_aries
ENSMUSG00000075600	Zc3h3	100	70.282	ENSPPAG00000035455	ZC3H3	87	69.697	Pan_paniscus
ENSMUSG00000075600	Zc3h3	100	69.375	ENSPPRG00000011707	ZC3H3	100	69.375	Panthera_pardus
ENSMUSG00000075600	Zc3h3	100	70.282	ENSPTRG00000020655	ZC3H3	100	70.995	Pan_troglodytes
ENSMUSG00000075600	Zc3h3	100	69.801	ENSPANG00000016578	ZC3H3	100	69.738	Papio_anubis
ENSMUSG00000075600	Zc3h3	56	45.217	ENSPKIG00000002936	zc3h3	61	49.361	Paramormyrops_kingsleyae
ENSMUSG00000075600	Zc3h3	100	85.759	ENSPEMG00000013893	Zc3h3	100	86.178	Peromyscus_maniculatus_bairdii
ENSMUSG00000075600	Zc3h3	72	40.609	ENSPFOG00000023405	zc3h3	65	42.830	Poecilia_formosa
ENSMUSG00000075600	Zc3h3	72	40.440	ENSPLAG00000001686	zc3h3	66	42.639	Poecilia_latipinna
ENSMUSG00000075600	Zc3h3	72	40.948	ENSPMEG00000002341	zc3h3	66	43.212	Poecilia_mexicana
ENSMUSG00000075600	Zc3h3	72	40.948	ENSPREG00000008923	zc3h3	66	43.212	Poecilia_reticulata
ENSMUSG00000075600	Zc3h3	100	70.084	ENSPPYG00000018935	ZC3H3	99	70.157	Pongo_abelii
ENSMUSG00000075600	Zc3h3	100	71.921	ENSPCOG00000028174	ZC3H3	100	72.727	Propithecus_coquereli
ENSMUSG00000075600	Zc3h3	88	71.692	ENSPVAG00000005979	ZC3H3	88	71.385	Pteropus_vampyrus
ENSMUSG00000075600	Zc3h3	63	43.678	ENSPNYG00000023105	zc3h3	65	43.678	Pundamilia_nyererei
ENSMUSG00000075600	Zc3h3	57	40.690	ENSPNAG00000009850	zc3h3	61	40.262	Pygocentrus_nattereri
ENSMUSG00000075600	Zc3h3	100	69.729	ENSRBIG00000039855	ZC3H3	100	69.906	Rhinopithecus_bieti
ENSMUSG00000075600	Zc3h3	100	69.729	ENSRROG00000040493	ZC3H3	100	69.801	Rhinopithecus_roxellana
ENSMUSG00000075600	Zc3h3	100	69.199	ENSSBOG00000021819	ZC3H3	100	70.010	Saimiri_boliviensis_boliviensis
ENSMUSG00000075600	Zc3h3	64	41.860	ENSSMAG00000016302	zc3h3	55	46.911	Scophthalmus_maximus
ENSMUSG00000075600	Zc3h3	62	45.265	ENSSDUG00000021871	zc3h3	62	45.076	Seriola_dumerili
ENSMUSG00000075600	Zc3h3	62	44.886	ENSSLDG00000016166	zc3h3	62	44.697	Seriola_lalandi_dorsalis
ENSMUSG00000075600	Zc3h3	61	42.500	ENSSPAG00000008518	zc3h3	62	42.308	Stegastes_partitus
ENSMUSG00000075600	Zc3h3	100	64.271	ENSSSCG00000006956	ZC3H3	99	64.583	Sus_scrofa
ENSMUSG00000075600	Zc3h3	65	57.760	ENSTBEG00000009096	-	74	57.920	Tupaia_belangeri
ENSMUSG00000075600	Zc3h3	91	69.735	ENSUAMG00000012919	ZC3H3	99	70.353	Ursus_americanus
ENSMUSG00000075600	Zc3h3	99	67.444	ENSVVUG00000022609	ZC3H3	98	68.114	Vulpes_vulpes
ENSMUSG00000075600	Zc3h3	63	50.287	ENSXETG00000004937	zc3h3	72	50.287	Xenopus_tropicalis
ENSMUSG00000075600	Zc3h3	57	40.000	ENSXCOG00000005025	zc3h3	71	39.931	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	16115198.	IDA	Component
GO:0006378	mRNA polyadenylation	-	ISO	Process
GO:0010793	regulation of mRNA export from nucleus	-	ISO	Process
GO:0016973	poly(A)+ mRNA export from nucleus	21873635.	IBA	Process
GO:0016973	poly(A)+ mRNA export from nucleus	-	ISO	Process
GO:0031124	mRNA 3'-end processing	16115198.	IDA	Process
GO:0032927	positive regulation of activin receptor signaling pathway	16115198.	IGI	Process
GO:0046332	SMAD binding	16115198.	IPI	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0051028	mRNA transport	-	IEA	Process
GO:0070412	R-SMAD binding	16115198.	IDA	Function