EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000077450 (Gene tree)
Gene ID: 19326
Gene Symbol: Rab11b
Alias: A730055L17Rik
Full Name: RAB11B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 18047 bases
Position: chr17:33742484-33760530
Accession: 99425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000110021	MMR_HSR1	PF01926.23	6.6e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000174744	-	503	-	-	- (aa)	-	-
ENSMUST00000173860	-	1544	-	ENSMUSP00000134448	193 (aa)	-	G3UZD3
ENSMUST00000173987	-	924	-	ENSMUSP00000133921	149 (aa)	-	G3UY29
ENSMUST00000172894	-	1028	-	ENSMUSP00000134544	125 (aa)	-	G3UZL4
ENSMUST00000235046	-	5822	-	-	- (aa)	-	-
ENSMUST00000057373	-	6109	XM_006523887	ENSMUSP00000110021	218 (aa)	XP_006523950	P46638

Gene Model

Click here to download ENSMUSG00000077450's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04144	Endocytosis	KEGG
mmu04152	AMPK signaling pathway	KEGG
mmu04962	Vasopressin-regulated water reabsorption	KEGG
mmu05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000077450's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000077450	Rab11b	91	37.778	ENSMUSG00000030704	Rab6a	75	38.217
ENSMUSG00000077450	Rab11b	91	42.222	ENSMUSG00000056515	Rab31	86	40.476
ENSMUSG00000077450	Rab11b	93	31.333	ENSMUSG00000029641	Rasl11a	62	31.333
ENSMUSG00000077450	Rab11b	98	53.425	ENSMUSG00000020149	Rab1a	100	45.581
ENSMUSG00000077450	Rab11b	97	38.621	ENSMUSG00000064147	Rab44	61	38.750
ENSMUSG00000077450	Rab11b	77	40.000	ENSMUSG00000022621	Rabl2	69	36.943
ENSMUSG00000077450	Rab11b	81	34.426	ENSMUSG00000027852	Nras	95	37.241
ENSMUSG00000077450	Rab11b	93	46.763	ENSMUSG00000021062	Rab15	82	44.000
ENSMUSG00000077450	Rab11b	91	36.296	ENSMUSG00000032549	Rab6b	77	35.404
ENSMUSG00000077450	Rab11b	81	34.711	ENSMUSG00000025499	Hras	85	36.420
ENSMUSG00000077450	Rab11b	89	34.586	ENSMUSG00000028945	Rheb	89	34.146
ENSMUSG00000077450	Rab11b	94	49.286	ENSMUSG00000029518	Rab35	99	43.062
ENSMUSG00000077450	Rab11b	95	47.887	ENSMUSG00000073639	Rab18	78	47.531
ENSMUSG00000077450	Rab11b	81	33.884	ENSMUSG00000030265	Kras	93	34.066
ENSMUSG00000077450	Rab11b	90	43.382	ENSMUSG00000027739	Rab33b	76	39.773
ENSMUSG00000077450	Rab11b	89	38.686	ENSMUSG00000079477	Rab7	93	42.857
ENSMUSG00000077450	Rab11b	90	49.265	ENSMUSG00000031202	Rab39b	82	47.126
ENSMUSG00000077450	Rab11b	93	47.826	ENSMUSG00000027935	Rab13	82	47.273
ENSMUSG00000077450	Rab11b	94	34.123	ENSMUSG00000020175	Rab36	79	34.123
ENSMUSG00000077450	Rab11b	90	40.580	ENSMUSG00000079316	Rab9	87	40.110
ENSMUSG00000077450	Rab11b	81	31.405	ENSMUSG00000032470	Mras	81	34.706
ENSMUSG00000077450	Rab11b	97	71.034	ENSMUSG00000008601	Rab25	100	61.435
ENSMUSG00000077450	Rab11b	93	44.203	ENSMUSG00000023460	Rab12	84	37.736
ENSMUSG00000077450	Rab11b	97	35.417	ENSMUSG00000004768	Rab23	80	33.508
ENSMUSG00000077450	Rab11b	89	42.336	ENSMUSG00000043463	Rab9b	86	41.040
ENSMUSG00000077450	Rab11b	93	57.246	ENSMUSG00000047187	Rab2a	81	55.556
ENSMUSG00000077450	Rab11b	77	32.203	ENSMUSG00000034936	Arl4d	57	32.203
ENSMUSG00000077450	Rab11b	97	100.000	ENSMUSG00000004771	Rab11a	100	96.078
ENSMUSG00000077450	Rab11b	91	42.963	ENSMUSG00000027519	Rab22a	81	42.675
ENSMUSG00000077450	Rab11b	93	56.522	ENSMUSG00000022159	Rab2b	99	48.387
ENSMUSG00000077450	Rab11b	97	53.793	ENSMUSG00000026878	Rab14	81	52.299
ENSMUSG00000077450	Rab11b	91	44.118	ENSMUSG00000020732	Rab37	77	44.578
ENSMUSG00000077450	Rab11b	89	49.624	ENSMUSG00000019173	Rab5c	75	48.447
ENSMUSG00000077450	Rab11b	89	48.120	ENSMUSG00000017831	Rab5a	90	41.667
ENSMUSG00000077450	Rab11b	95	55.634	ENSMUSG00000024870	Rab1b	99	48.095
ENSMUSG00000077450	Rab11b	78	41.026	ENSMUSG00000002059	Rab34	70	33.880
ENSMUSG00000077450	Rab11b	89	48.872	ENSMUSG00000000711	Rab5b	90	43.627
ENSMUSG00000077450	Rab11b	65	30.986	ENSMUSG00000026426	Arl8a	72	30.986
ENSMUSG00000077450	Rab11b	93	44.604	ENSMUSG00000030643	Rab30	97	47.115
ENSMUSG00000077450	Rab11b	81	39.669	ENSMUSG00000083649	Rasl2-9	70	37.013
ENSMUSG00000077450	Rab11b	90	41.912	ENSMUSG00000031104	Rab33a	75	40.331
ENSMUSG00000077450	Rab11b	80	31.746	ENSMUSG00000047446	Arl4a	60	31.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000077450	Rab11b	100	99.083	ENSG00000185236	RAB11B	100	100.000	Homo_sapiens
ENSMUSG00000077450	Rab11b	99	98.174	ENSAMEG00000004955	RAB11B	99	98.174	Ailuropoda_melanoleuca
ENSMUSG00000077450	Rab11b	99	95.946	ENSACIG00000024374	rab11ba	70	97.059	Amphilophus_citrinellus
ENSMUSG00000077450	Rab11b	97	98.621	ENSAOCG00000018050	rab11ba	100	94.495	Amphiprion_ocellaris
ENSMUSG00000077450	Rab11b	97	97.931	ENSAPEG00000009177	rab11ba	100	94.037	Amphiprion_percula
ENSMUSG00000077450	Rab11b	53	97.468	ENSAPEG00000009227	-	89	97.468	Amphiprion_percula
ENSMUSG00000077450	Rab11b	100	96.330	ENSATEG00000023730	rab11ba	100	96.330	Anabas_testudineus
ENSMUSG00000077450	Rab11b	100	99.083	ENSANAG00000037616	RAB11B	100	99.083	Aotus_nancymaae
ENSMUSG00000077450	Rab11b	97	89.655	ENSACLG00000018852	-	92	87.685	Astatotilapia_calliptera
ENSMUSG00000077450	Rab11b	97	97.241	ENSACLG00000005420	rab11ba	100	94.037	Astatotilapia_calliptera
ENSMUSG00000077450	Rab11b	97	93.103	WBGene00004274	rab-11.1	99	80.556	Caenorhabditis_elegans
ENSMUSG00000077450	Rab11b	100	99.083	ENSCJAG00000010778	RAB11B	100	99.083	Callithrix_jacchus
ENSMUSG00000077450	Rab11b	100	99.083	ENSCAFG00000032060	RAB11B	100	99.083	Canis_familiaris
ENSMUSG00000077450	Rab11b	100	99.083	ENSCAFG00020022184	RAB11B	100	99.083	Canis_lupus_dingo
ENSMUSG00000077450	Rab11b	100	99.083	ENSTSYG00000014758	RAB11B	100	99.083	Carlito_syrichta
ENSMUSG00000077450	Rab11b	100	98.624	ENSCPOG00000030154	RAB11B	100	98.624	Cavia_porcellus
ENSMUSG00000077450	Rab11b	100	99.083	ENSCCAG00000031042	RAB11B	100	99.083	Cebus_capucinus
ENSMUSG00000077450	Rab11b	100	99.083	ENSCLAG00000003207	RAB11B	100	99.083	Chinchilla_lanigera
ENSMUSG00000077450	Rab11b	100	99.083	ENSCSAG00000008024	RAB11B	100	99.083	Chlorocebus_sabaeus
ENSMUSG00000077450	Rab11b	100	84.862	ENSCHOG00000013525	RAB11B	100	84.862	Choloepus_hoffmanni
ENSMUSG00000077450	Rab11b	97	95.862	ENSCING00000009526	-	100	84.018	Ciona_intestinalis
ENSMUSG00000077450	Rab11b	100	99.083	ENSCANG00000040517	RAB11B	100	99.083	Colobus_angolensis_palliatus
ENSMUSG00000077450	Rab11b	100	99.083	ENSCGRG00001013827	Rab11b	100	99.083	Cricetulus_griseus_chok1gshd
ENSMUSG00000077450	Rab11b	100	99.083	ENSCGRG00000010967	Rab11b	100	99.083	Cricetulus_griseus_crigri
ENSMUSG00000077450	Rab11b	99	96.622	ENSCSEG00000007121	rab11ba	84	94.037	Cynoglossus_semilaevis
ENSMUSG00000077450	Rab11b	97	98.621	ENSDARG00000041878	rab11ba	100	95.413	Danio_rerio
ENSMUSG00000077450	Rab11b	100	97.248	ENSDNOG00000004134	-	100	97.248	Dasypus_novemcinctus
ENSMUSG00000077450	Rab11b	100	99.083	ENSDNOG00000014618	RAB11B	97	99.083	Dasypus_novemcinctus
ENSMUSG00000077450	Rab11b	100	99.083	ENSDORG00000006304	Rab11b	100	99.083	Dipodomys_ordii
ENSMUSG00000077450	Rab11b	97	89.655	ENSEBUG00000015447	-	100	80.734	Eptatretus_burgeri
ENSMUSG00000077450	Rab11b	97	97.931	ENSEBUG00000011775	rab11ba	99	93.171	Eptatretus_burgeri
ENSMUSG00000077450	Rab11b	96	100.000	ENSEEUG00000009165	-	100	100.000	Erinaceus_europaeus
ENSMUSG00000077450	Rab11b	99	97.279	ENSELUG00000019240	-	99	92.784	Esox_lucius
ENSMUSG00000077450	Rab11b	100	98.624	ENSFCAG00000015216	RAB11B	100	98.624	Felis_catus
ENSMUSG00000077450	Rab11b	100	98.624	ENSFDAG00000019872	RAB11B	100	98.624	Fukomys_damarensis
ENSMUSG00000077450	Rab11b	99	97.297	ENSFHEG00000022642	rab11ba	100	94.954	Fundulus_heteroclitus
ENSMUSG00000077450	Rab11b	99	93.919	ENSGMOG00000007390	rab11ba	99	92.661	Gadus_morhua
ENSMUSG00000077450	Rab11b	99	96.622	ENSGAFG00000005679	rab11ba	100	95.413	Gambusia_affinis
ENSMUSG00000077450	Rab11b	100	98.165	ENSGAGG00000012557	-	100	98.165	Gopherus_agassizii
ENSMUSG00000077450	Rab11b	53	89.873	ENSHBUG00000019290	-	95	89.873	Haplochromis_burtoni
ENSMUSG00000077450	Rab11b	100	99.083	ENSHGLG00000014984	RAB11B	100	99.083	Heterocephalus_glaber_female
ENSMUSG00000077450	Rab11b	100	99.083	ENSHGLG00100003638	RAB11B	100	99.083	Heterocephalus_glaber_male
ENSMUSG00000077450	Rab11b	100	99.083	ENSSTOG00000031571	RAB11B	100	99.083	Ictidomys_tridecemlineatus
ENSMUSG00000077450	Rab11b	100	99.083	ENSJJAG00000018891	Rab11b	100	99.083	Jaculus_jaculus
ENSMUSG00000077450	Rab11b	99	97.297	ENSKMAG00000006082	-	100	95.872	Kryptolebias_marmoratus
ENSMUSG00000077450	Rab11b	99	96.622	ENSLBEG00000006087	rab11ba	100	94.954	Labrus_bergylta
ENSMUSG00000077450	Rab11b	97	98.621	ENSLACG00000016974	RAB11B	99	99.412	Latimeria_chalumnae
ENSMUSG00000077450	Rab11b	100	99.083	ENSLAFG00000013598	RAB11B	100	99.083	Loxodonta_africana
ENSMUSG00000077450	Rab11b	100	99.083	ENSMNEG00000039759	-	100	99.083	Macaca_nemestrina
ENSMUSG00000077450	Rab11b	100	95.413	ENSMAMG00000018556	rab11ba	100	95.413	Mastacembelus_armatus
ENSMUSG00000077450	Rab11b	97	89.655	ENSMZEG00005019251	-	92	87.685	Maylandia_zebra
ENSMUSG00000077450	Rab11b	97	97.241	ENSMZEG00005010947	rab11ba	100	94.037	Maylandia_zebra
ENSMUSG00000077450	Rab11b	100	99.541	ENSMAUG00000021579	Rab11b	100	99.541	Mesocricetus_auratus
ENSMUSG00000077450	Rab11b	100	98.624	ENSMOCG00000012667	Rab11b	100	98.624	Microtus_ochrogaster
ENSMUSG00000077450	Rab11b	99	94.595	ENSMALG00000021949	rab11ba	100	93.119	Monopterus_albus
ENSMUSG00000077450	Rab11b	100	100.000	MGP_CAROLIEiJ_G0021415	Rab11b	100	100.000	Mus_caroli
ENSMUSG00000077450	Rab11b	100	99.083	MGP_PahariEiJ_G0020420	Rab11b	100	99.083	Mus_pahari
ENSMUSG00000077450	Rab11b	100	100.000	MGP_SPRETEiJ_G0022327	Rab11b	100	100.000	Mus_spretus
ENSMUSG00000077450	Rab11b	100	98.624	ENSMPUG00000007263	RAB11B	100	98.624	Mustela_putorius_furo
ENSMUSG00000077450	Rab11b	100	94.570	ENSMLUG00000002308	-	100	94.570	Myotis_lucifugus
ENSMUSG00000077450	Rab11b	100	99.083	ENSNGAG00000015757	Rab11b	100	99.083	Nannospalax_galili
ENSMUSG00000077450	Rab11b	99	95.946	ENSNBRG00000023898	rab11ba	84	94.495	Neolamprologus_brichardi
ENSMUSG00000077450	Rab11b	100	99.083	ENSNLEG00000001733	RAB11B	100	99.083	Nomascus_leucogenys
ENSMUSG00000077450	Rab11b	100	99.083	ENSODEG00000011371	RAB11B	100	99.083	Octodon_degus
ENSMUSG00000077450	Rab11b	99	96.622	ENSONIG00000002535	rab11ba	100	94.954	Oreochromis_niloticus
ENSMUSG00000077450	Rab11b	89	99.242	ENSOCUG00000028208	RAB11B	64	98.137	Oryctolagus_cuniculus
ENSMUSG00000077450	Rab11b	99	97.973	ENSORLG00000015307	rab11ba	99	96.774	Oryzias_latipes
ENSMUSG00000077450	Rab11b	99	97.973	ENSORLG00020020816	rab11ba	99	96.774	Oryzias_latipes_hni
ENSMUSG00000077450	Rab11b	99	97.973	ENSORLG00015016946	rab11ba	81	96.759	Oryzias_latipes_hsok
ENSMUSG00000077450	Rab11b	99	97.973	ENSOMEG00000002581	rab11ba	99	96.774	Oryzias_melastigma
ENSMUSG00000077450	Rab11b	100	99.083	ENSOGAG00000003227	RAB11B	99	99.083	Otolemur_garnettii
ENSMUSG00000077450	Rab11b	100	99.083	ENSOARG00000003801	RAB11B	97	99.083	Ovis_aries
ENSMUSG00000077450	Rab11b	97	99.310	ENSPPRG00000010160	RAB11B	88	95.556	Panthera_pardus
ENSMUSG00000077450	Rab11b	100	99.083	ENSPEMG00000014536	Rab11b	100	99.083	Peromyscus_maniculatus_bairdii
ENSMUSG00000077450	Rab11b	89	96.970	ENSPMAG00000009335	-	100	80.000	Petromyzon_marinus
ENSMUSG00000077450	Rab11b	99	97.297	ENSPFOG00000006159	rab11ba	100	95.872	Poecilia_formosa
ENSMUSG00000077450	Rab11b	99	97.297	ENSPLAG00000014243	rab11ba	100	95.872	Poecilia_latipinna
ENSMUSG00000077450	Rab11b	53	98.734	ENSPLAG00000014507	-	100	98.734	Poecilia_latipinna
ENSMUSG00000077450	Rab11b	99	97.297	ENSPMEG00000007917	rab11ba	75	95.872	Poecilia_mexicana
ENSMUSG00000077450	Rab11b	99	97.297	ENSPREG00000006357	rab11ba	78	95.872	Poecilia_reticulata
ENSMUSG00000077450	Rab11b	100	99.083	ENSPPYG00000009504	RAB11B	100	99.083	Pongo_abelii
ENSMUSG00000077450	Rab11b	100	90.367	ENSPCAG00000016118	RAB11B	100	90.367	Procavia_capensis
ENSMUSG00000077450	Rab11b	97	97.241	ENSPCOG00000008655	-	100	97.945	Propithecus_coquereli
ENSMUSG00000077450	Rab11b	100	99.083	ENSPCOG00000028053	RAB11B	100	99.083	Propithecus_coquereli
ENSMUSG00000077450	Rab11b	100	99.083	ENSPVAG00000009645	RAB11B	100	99.083	Pteropus_vampyrus
ENSMUSG00000077450	Rab11b	97	97.241	ENSPNYG00000019644	rab11ba	100	94.037	Pundamilia_nyererei
ENSMUSG00000077450	Rab11b	97	85.034	ENSPNYG00000023810	-	97	74.091	Pundamilia_nyererei
ENSMUSG00000077450	Rab11b	100	96.789	ENSPNAG00000006431	-	100	96.789	Pygocentrus_nattereri
ENSMUSG00000077450	Rab11b	100	96.330	ENSPNAG00000020475	rab11ba	100	96.330	Pygocentrus_nattereri
ENSMUSG00000077450	Rab11b	100	99.083	ENSRNOG00000007648	Rab11b	100	99.083	Rattus_norvegicus
ENSMUSG00000077450	Rab11b	100	99.083	ENSSBOG00000035094	RAB11B	100	99.083	Saimiri_boliviensis_boliviensis
ENSMUSG00000077450	Rab11b	99	97.297	ENSSDUG00000002965	rab11ba	100	95.872	Seriola_dumerili
ENSMUSG00000077450	Rab11b	99	97.297	ENSSLDG00000005221	rab11ba	100	95.872	Seriola_lalandi_dorsalis
ENSMUSG00000077450	Rab11b	99	96.622	ENSSPAG00000017313	rab11ba	100	94.954	Stegastes_partitus
ENSMUSG00000077450	Rab11b	100	99.083	ENSSSCG00000013600	RAB11B	100	99.083	Sus_scrofa
ENSMUSG00000077450	Rab11b	87	100.000	ENSTBEG00000014750	-	100	100.000	Tupaia_belangeri
ENSMUSG00000077450	Rab11b	100	99.083	ENSTTRG00000009758	RAB11B	100	99.083	Tursiops_truncatus
ENSMUSG00000077450	Rab11b	87	100.000	ENSUMAG00000014594	RAB11B	97	80.976	Ursus_maritimus
ENSMUSG00000077450	Rab11b	100	99.083	ENSVVUG00000025210	RAB11B	100	99.083	Vulpes_vulpes
ENSMUSG00000077450	Rab11b	97	98.621	ENSXETG00000021890	rab11b.2	99	95.413	Xenopus_tropicalis
ENSMUSG00000077450	Rab11b	89	97.744	ENSXCOG00000009194	-	98	97.744	Xiphophorus_couchianus
ENSMUSG00000077450	Rab11b	99	96.622	ENSXMAG00000013416	rab11ba	100	95.413	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0001881	receptor recycling	10942597.	IMP	Process
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	10942597.	IMP	Function
GO:0003924	GTPase activity	-	ISO	Function
GO:0005515	protein binding	18656450.22935415.29514919.	IPI	Function
GO:0005525	GTP binding	10942597.	IDA	Function
GO:0005525	GTP binding	-	ISO	Function
GO:0005737	cytoplasm	18656450.	IDA	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005768	endosome	21873635.	IBA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006887	exocytosis	21873635.	IBA	Process
GO:0006897	endocytosis	10942597.	IMP	Process
GO:0008021	synaptic vesicle	-	ISO	Component
GO:0015031	protein transport	-	IEA	Process
GO:0016020	membrane	-	IEA	Component
GO:0019003	GDP binding	-	ISO	Function
GO:0030054	cell junction	-	IEA	Component
GO:0031410	cytoplasmic vesicle	12051767.	ISO	Component
GO:0031489	myosin V binding	-	ISO	Function
GO:0032402	melanosome transport	21291502.	IMP	Process
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0033572	transferrin transport	10942597.	IMP	Process
GO:0035773	insulin secretion involved in cellular response to glucose stimulus	19335615.	IMP	Process
GO:0044070	regulation of anion transport	-	ISO	Process
GO:0045054	constitutive secretory pathway	21873635.	IBA	Process
GO:0045054	constitutive secretory pathway	-	ISO	Process
GO:0045055	regulated exocytosis	21873635.	IBA	Process
GO:0045055	regulated exocytosis	19335615.	IMP	Process
GO:0045055	regulated exocytosis	-	ISO	Process
GO:0045202	synapse	-	IEA	Component
GO:0045335	phagocytic vesicle	-	ISO	Component
GO:0055037	recycling endosome	21873635.	IBA	Component
GO:0055037	recycling endosome	21291502.	IDA	Component
GO:0055038	recycling endosome membrane	10942597.	IDA	Component
GO:0071468	cellular response to acidic pH	-	ISO	Process
GO:0090150	establishment of protein localization to membrane	-	ISO	Process
GO:0098993	anchored component of synaptic vesicle membrane	-	ISO	Component
GO:0150093	amyloid-beta clearance by transcytosis	-	ISO	Process
GO:1990126	retrograde transport, endosome to plasma membrane	-	ISO	Process
GO:2000008	regulation of protein localization to cell surface	-	ISO	Process
GO:2001135	regulation of endocytic recycling	10942597.	IMP	Process