EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000078619 (Gene tree)
Gene ID: 83796
Gene Symbol: Smarcd2
Alias: Baf60b
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily d%2C member 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 9794
Position: chr11: 106263179-106272972
Accession: 1933621
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000132278	-	621	-	-	- (aa)	-	-
ENSMUST00000140255	-	884	-	ENSMUSP00000133629	247 (aa)	-	G3UXC0
ENSMUST00000174017	-	485	-	-	- (aa)	-	-
ENSMUST00000155514	-	1250	-	-	- (aa)	-	-
ENSMUST00000174253	-	608	-	-	- (aa)	-	-
ENSMUST00000155243	-	405	-	-	- (aa)	-	-
ENSMUST00000106843	-	2548	-	ENSMUSP00000102456	484 (aa)	-	Q99JR8
ENSMUST00000106841	-	886	-	-	- (aa)	-	-
ENSMUST00000021052	-	2747	XM_006534552	ENSMUSP00000021052	531 (aa)	XP_006534615	Q99JR8

Gene Model

Click here to download ENSMUSG00000078619's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04714	Thermogenesis	KEGG
mmu05225	Hepatocellular carcinoma	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000078619's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0006337	nucleosome disassembly	-	ISO	Process
GO:0006338	chromatin remodeling	-	ISO	Process
GO:0016514	SWI/SNF complex	-	ISO	Component
GO:0043044	ATP-dependent chromatin remodeling	-	IEA	Process