EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000079036 (Gene tree)
Gene ID
654309
Gene Symbol
Alkbh1
Alias
Alkbh|Nrp|alkB
Full Name
alkB homolog 1%2C histone H2A dioxygenase
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Minus strand
Length
18178 bases
Position
chr12:87425840-87444017
Accession
2384034
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP000001245652OG-FeII_Oxy_2PF13532.62.5e-3611
ENSMUSP000001248922OG-FeII_Oxy_2PF13532.61.2e-2511
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000162986-1319-ENSMUSP0000012537278 (aa)-E0CZH7
ENSMUST00000160850-1423--- (aa)--
ENSMUST00000091090-1335--- (aa)--
ENSMUST00000160113-2019-ENSMUSP0000012469168 (aa)-E0CX46
ENSMUST00000176758-3598--- (aa)--
ENSMUST00000159079-1042-ENSMUSP00000124445101 (aa)-E0CY72
ENSMUST00000162247-1883-ENSMUSP00000124360200 (aa)-E0CYA7
ENSMUST00000185301-408-ENSMUSP00000140233135 (aa)-Q5XLJ1
ENSMUST00000162961-3857-ENSMUSP00000124565389 (aa)-P0CB42
ENSMUST00000160919-611--- (aa)--
ENSMUST00000161712-2154-ENSMUSP0000012493368 (aa)-E0CX46
ENSMUST00000160687-541-ENSMUSP00000124892180 (aa)-F6U5G1
Gene Model
Click here to download ENSMUSG00000079036's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000079036's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000079036Alkbh110082.776ENSG00000100601ALKBH110082.776Homo_sapiens
ENSMUSG00000079036Alkbh19962.121ENSAPOG00000001293alkbh19256.250Acanthochromis_polyacanthus
ENSMUSG00000079036Alkbh110084.062ENSAMEG00000003966ALKBH110084.062Ailuropoda_melanoleuca
ENSMUSG00000079036Alkbh19961.616ENSACIG00000000165alkbh18957.349Amphilophus_citrinellus
ENSMUSG00000079036Alkbh19963.131ENSAOCG00000006323alkbh19556.077Amphiprion_ocellaris
ENSMUSG00000079036Alkbh19961.616ENSAOCG00000004578-8859.559Amphiprion_ocellaris
ENSMUSG00000079036Alkbh19962.626ENSAOCG00000009356-9055.340Amphiprion_ocellaris
ENSMUSG00000079036Alkbh19953.500ENSAPEG00000006841-8451.988Amphiprion_percula
ENSMUSG00000079036Alkbh19963.131ENSAPEG00000015899alkbh19854.592Amphiprion_percula
ENSMUSG00000079036Alkbh19960.101ENSAPEG00000008720-9158.456Amphiprion_percula
ENSMUSG00000079036Alkbh19963.131ENSATEG00000013518alkbh19655.820Anabas_testudineus
ENSMUSG00000079036Alkbh19975.758ENSAPLG00000015685ALKBH110071.212Anas_platyrhynchos
ENSMUSG00000079036Alkbh19969.036ENSACAG00000017276ALKBH19964.767Anolis_carolinensis
ENSMUSG00000079036Alkbh19983.838ENSANAG00000023679ALKBH110082.519Aotus_nancymaae
ENSMUSG00000079036Alkbh110046.429ENSACLG00000017932alkbh19846.615Astatotilapia_calliptera
ENSMUSG00000079036Alkbh19864.615ENSAMXG00000034307alkbh18859.322Astyanax_mexicanus
ENSMUSG00000079036Alkbh19983.247ENSBTAG00000008133ALKBH19983.247Bos_taurus
ENSMUSG00000079036Alkbh18832.768WBGene00021783Y51H7C.58231.024Caenorhabditis_elegans
ENSMUSG00000079036Alkbh19983.838ENSCJAG00000016936ALKBH110082.005Callithrix_jacchus
ENSMUSG00000079036Alkbh110083.548ENSCAFG00000017229ALKBH110083.548Canis_familiaris
ENSMUSG00000079036Alkbh19984.343ENSCAFG00020000856ALKBH110083.290Canis_lupus_dingo
ENSMUSG00000079036Alkbh19983.838ENSCHIG00000017896ALKBH19982.216Capra_hircus
ENSMUSG00000079036Alkbh19979.444ENSTSYG00000010944ALKBH110077.378Carlito_syrichta
ENSMUSG00000079036Alkbh19964.804ENSCAPG00000016188ALKBH110064.634Cavia_aperea
ENSMUSG00000079036Alkbh110081.748ENSCPOG00000001498ALKBH110081.748Cavia_porcellus
ENSMUSG00000079036Alkbh19983.838ENSCCAG00000037198ALKBH110082.262Cebus_capucinus
ENSMUSG00000079036Alkbh110084.576ENSCATG00000003846ALKBH110084.576Cercocebus_atys
ENSMUSG00000079036Alkbh110082.005ENSCLAG00000014129ALKBH110082.005Chinchilla_lanigera
ENSMUSG00000079036Alkbh17581.690ENSCHOG00000001531ALKBH17581.690Choloepus_hoffmanni
ENSMUSG00000079036Alkbh19977.778ENSCPBG00000026326ALKBH110070.000Chrysemys_picta_bellii
ENSMUSG00000079036Alkbh19840.000ENSCING00000022762-9935.474Ciona_intestinalis
ENSMUSG00000079036Alkbh19741.414ENSCSAVG00000011640-9935.119Ciona_savignyi
ENSMUSG00000079036Alkbh110084.319ENSCANG00000028132ALKBH110084.319Colobus_angolensis_palliatus
ENSMUSG00000079036Alkbh110089.460ENSCGRG00001009815Alkbh110089.460Cricetulus_griseus_chok1gshd
ENSMUSG00000079036Alkbh110087.918ENSCGRG00000009963Alkbh110087.918Cricetulus_griseus_crigri
ENSMUSG00000079036Alkbh19960.101ENSCSEG00000015769alkbh19653.786Cynoglossus_semilaevis
ENSMUSG00000079036Alkbh19964.646ENSCVAG00000012507alkbh19454.805Cyprinodon_variegatus
ENSMUSG00000079036Alkbh19962.626ENSDARG00000071164alkbh110058.529Danio_rerio
ENSMUSG00000079036Alkbh110084.833ENSDNOG00000007719ALKBH110084.833Dasypus_novemcinctus
ENSMUSG00000079036Alkbh110081.234ENSDORG00000012377Alkbh110081.234Dipodomys_ordii
ENSMUSG00000079036Alkbh19841.538FBgn0065035AlkB9835.135Drosophila_melanogaster
ENSMUSG00000079036Alkbh110080.720ENSETEG00000010342ALKBH110080.720Echinops_telfairi
ENSMUSG00000079036Alkbh19953.030ENSEBUG00000006261alkbh19748.641Eptatretus_burgeri
ENSMUSG00000079036Alkbh110084.576ENSEASG00005020190ALKBH110084.576Equus_asinus_asinus
ENSMUSG00000079036Alkbh110085.090ENSECAG00000022027ALKBH110085.090Equus_caballus
ENSMUSG00000079036Alkbh16371.138ENSEEUG00000007227-10071.138Erinaceus_europaeus
ENSMUSG00000079036Alkbh19964.646ENSELUG00000016747alkbh19455.808Esox_lucius
ENSMUSG00000079036Alkbh110072.821ENSFCAG00000037897ALKBH110072.821Felis_catus
ENSMUSG00000079036Alkbh19974.747ENSFALG00000012588ALKBH19867.200Ficedula_albicollis
ENSMUSG00000079036Alkbh110084.833ENSFDAG00000019064ALKBH110084.833Fukomys_damarensis
ENSMUSG00000079036Alkbh19964.141ENSFHEG00000015690alkbh19558.308Fundulus_heteroclitus
ENSMUSG00000079036Alkbh19958.586ENSGMOG00000016932alkbh19956.701Gadus_morhua
ENSMUSG00000079036Alkbh19975.253ENSGALG00000010485ALKBH18967.539Gallus_gallus
ENSMUSG00000079036Alkbh19863.265ENSGAFG00000010990alkbh19755.181Gambusia_affinis
ENSMUSG00000079036Alkbh19954.040ENSGACG00000013378alkbh19954.949Gasterosteus_aculeatus
ENSMUSG00000079036Alkbh19976.263ENSGAGG00000009957ALKBH110068.462Gopherus_agassizii
ENSMUSG00000079036Alkbh110082.776ENSGGOG00000011055ALKBH110082.776Gorilla_gorilla
ENSMUSG00000079036Alkbh110083.033ENSHGLG00000015533ALKBH110083.033Heterocephalus_glaber_female
ENSMUSG00000079036Alkbh110083.033ENSHGLG00100013968ALKBH110083.033Heterocephalus_glaber_male
ENSMUSG00000079036Alkbh19864.286ENSHCOG00000006780alkbh19156.322Hippocampus_comes
ENSMUSG00000079036Alkbh19865.306ENSIPUG00000010201alkbh19060.057Ictalurus_punctatus
ENSMUSG00000079036Alkbh110084.833ENSSTOG00000003254-10084.833Ictidomys_tridecemlineatus
ENSMUSG00000079036Alkbh19978.680ENSSTOG00000024819-9875.515Ictidomys_tridecemlineatus
ENSMUSG00000079036Alkbh110085.347ENSJJAG00000019755Alkbh110085.347Jaculus_jaculus
ENSMUSG00000079036Alkbh19962.121ENSKMAG00000002019alkbh19155.464Kryptolebias_marmoratus
ENSMUSG00000079036Alkbh19959.596ENSLBEG00000007472alkbh19255.707Labrus_bergylta
ENSMUSG00000079036Alkbh19966.162ENSLACG00000013496ALKBH19461.453Latimeria_chalumnae
ENSMUSG00000079036Alkbh19868.718ENSLOCG00000008800alkbh19161.064Lepisosteus_oculatus
ENSMUSG00000079036Alkbh110083.290ENSLAFG00000003475ALKBH110083.290Loxodonta_africana
ENSMUSG00000079036Alkbh110084.319ENSMFAG00000001551ALKBH110084.319Macaca_fascicularis
ENSMUSG00000079036Alkbh110084.576ENSMMUG00000023626ALKBH110084.576Macaca_mulatta
ENSMUSG00000079036Alkbh19989.385ENSMNEG00000033314ALKBH110077.378Macaca_nemestrina
ENSMUSG00000079036Alkbh110084.319ENSMLEG00000033965ALKBH110084.319Mandrillus_leucophaeus
ENSMUSG00000079036Alkbh19963.131ENSMAMG00000016048alkbh19658.430Mastacembelus_armatus
ENSMUSG00000079036Alkbh19964.646ENSMZEG00005004627alkbh19855.612Maylandia_zebra
ENSMUSG00000079036Alkbh15166.304ENSMZEG00005005130-8150.481Maylandia_zebra
ENSMUSG00000079036Alkbh19975.253ENSMGAG00000012910ALKBH110071.212Meleagris_gallopavo
ENSMUSG00000079036Alkbh110072.751ENSMAUG00000012502Alkbh110072.751Mesocricetus_auratus
ENSMUSG00000079036Alkbh110084.062ENSMICG00000030789ALKBH110084.062Microcebus_murinus
ENSMUSG00000079036Alkbh110091.260ENSMOCG00000005374Alkbh110091.260Microtus_ochrogaster
ENSMUSG00000079036Alkbh19861.735ENSMMOG00000018265alkbh19554.201Mola_mola
ENSMUSG00000079036Alkbh19981.218ENSMODG00000005263ALKBH110075.907Monodelphis_domestica
ENSMUSG00000079036Alkbh19963.636ENSMALG00000012608alkbh19754.922Monopterus_albus
ENSMUSG00000079036Alkbh199100.000MGP_PahariEiJ_G0029753Alkbh1100100.000Mus_pahari
ENSMUSG00000079036Alkbh110099.486MGP_SPRETEiJ_G0018839Alkbh110099.486Mus_spretus
ENSMUSG00000079036Alkbh110083.805ENSMPUG00000008742ALKBH110083.805Mustela_putorius_furo
ENSMUSG00000079036Alkbh110083.290ENSMLUG00000005220ALKBH110083.290Myotis_lucifugus
ENSMUSG00000079036Alkbh110084.615ENSNGAG00000006997Alkbh110084.615Nannospalax_galili
ENSMUSG00000079036Alkbh19956.842ENSNBRG00000012113alkbh19848.469Neolamprologus_brichardi
ENSMUSG00000079036Alkbh110068.123ENSNLEG00000016766ALKBH110068.123Nomascus_leucogenys
ENSMUSG00000079036Alkbh19980.711ENSMEUG00000015005ALKBH19967.876Notamacropus_eugenii
ENSMUSG00000079036Alkbh19981.818ENSOPRG00000007549ALKBH110080.720Ochotona_princeps
ENSMUSG00000079036Alkbh19965.152ENSONIG00000011694alkbh19755.814Oreochromis_niloticus
ENSMUSG00000079036Alkbh19978.173ENSOANG00000010841ALKBH19970.052Ornithorhynchus_anatinus
ENSMUSG00000079036Alkbh110082.262ENSOCUG00000001438ALKBH110082.262Oryctolagus_cuniculus
ENSMUSG00000079036Alkbh19963.131ENSORLG00000010750alkbh19954.948Oryzias_latipes
ENSMUSG00000079036Alkbh19963.131ENSORLG00020022193alkbh19954.987Oryzias_latipes_hni
ENSMUSG00000079036Alkbh19963.131ENSORLG00015020192alkbh19954.731Oryzias_latipes_hsok
ENSMUSG00000079036Alkbh19965.152ENSOMEG00000019337alkbh19256.154Oryzias_melastigma
ENSMUSG00000079036Alkbh19982.828ENSOGAG00000006929ALKBH110083.158Otolemur_garnettii
ENSMUSG00000079036Alkbh19983.838ENSOARG00000002621ALKBH19981.443Ovis_aries
ENSMUSG00000079036Alkbh110082.519ENSPPAG00000041592ALKBH110082.519Pan_paniscus
ENSMUSG00000079036Alkbh110084.319ENSPPRG00000014697ALKBH110084.319Panthera_pardus
ENSMUSG00000079036Alkbh110084.319ENSPTIG00000014206ALKBH110084.319Panthera_tigris_altaica
ENSMUSG00000079036Alkbh110082.519ENSPTRG00000006586ALKBH110082.519Pan_troglodytes
ENSMUSG00000079036Alkbh110084.576ENSPANG00000006979ALKBH110084.576Papio_anubis
ENSMUSG00000079036Alkbh19965.152ENSPKIG00000014959alkbh18960.623Paramormyrops_kingsleyae
ENSMUSG00000079036Alkbh19975.758ENSPSIG00000011527ALKBH110070.393Pelodiscus_sinensis
ENSMUSG00000079036Alkbh19860.204ENSPMGG00000010538alkbh19555.362Periophthalmus_magnuspinnatus
ENSMUSG00000079036Alkbh110087.817ENSPEMG00000022798Alkbh110087.817Peromyscus_maniculatus_bairdii
ENSMUSG00000079036Alkbh19980.203ENSPCIG00000026843ALKBH110075.389Phascolarctos_cinereus
ENSMUSG00000079036Alkbh19963.636ENSPFOG00000006775alkbh19754.805Poecilia_formosa
ENSMUSG00000079036Alkbh19963.636ENSPLAG00000011128alkbh19754.805Poecilia_latipinna
ENSMUSG00000079036Alkbh19963.636ENSPMEG00000019521alkbh19755.325Poecilia_mexicana
ENSMUSG00000079036Alkbh19963.131ENSPREG00000011690alkbh19755.065Poecilia_reticulata
ENSMUSG00000079036Alkbh110082.776ENSPPYG00000006029ALKBH110082.776Pongo_abelii
ENSMUSG00000079036Alkbh110084.062ENSPCAG00000004251ALKBH110084.062Procavia_capensis
ENSMUSG00000079036Alkbh110083.805ENSPCOG00000027372ALKBH110083.805Propithecus_coquereli
ENSMUSG00000079036Alkbh110083.290ENSPVAG00000006418ALKBH110083.290Pteropus_vampyrus
ENSMUSG00000079036Alkbh19962.626ENSPNYG00000003199alkbh19955.989Pundamilia_nyererei
ENSMUSG00000079036Alkbh15633.663ENSPNAG00000015253-6035.115Pygocentrus_nattereri
ENSMUSG00000079036Alkbh19966.162ENSPNAG00000008625alkbh19060.452Pygocentrus_nattereri
ENSMUSG00000079036Alkbh19992.010ENSRNOG00000012264Alkbh19992.010Rattus_norvegicus
ENSMUSG00000079036Alkbh110084.319ENSRBIG00000026838ALKBH110084.319Rhinopithecus_bieti
ENSMUSG00000079036Alkbh110084.319ENSRROG00000041777ALKBH110084.319Rhinopithecus_roxellana
ENSMUSG00000079036Alkbh110082.776ENSSBOG00000014817ALKBH110082.776Saimiri_boliviensis_boliviensis
ENSMUSG00000079036Alkbh19979.188ENSSHAG00000017615ALKBH19975.907Sarcophilus_harrisii
ENSMUSG00000079036Alkbh19966.162ENSSFOG00015022204alkbh19157.104Scleropages_formosus
ENSMUSG00000079036Alkbh19964.141ENSSMAG00000012912alkbh19755.968Scophthalmus_maximus
ENSMUSG00000079036Alkbh19963.131ENSSDUG00000021889alkbh19256.461Seriola_dumerili
ENSMUSG00000079036Alkbh19963.636ENSSLDG00000023125alkbh19257.382Seriola_lalandi_dorsalis
ENSMUSG00000079036Alkbh19981.818ENSSARG00000006523ALKBH110071.208Sorex_araneus
ENSMUSG00000079036Alkbh19556.334ENSSPUG00000009359ALKBH19756.334Sphenodon_punctatus
ENSMUSG00000079036Alkbh19962.121ENSSPAG00000013486alkbh19654.667Stegastes_partitus
ENSMUSG00000079036Alkbh19982.732ENSSSCG00000025906ALKBH19982.732Sus_scrofa
ENSMUSG00000079036Alkbh19975.758ENSTGUG00000012335ALKBH19968.000Taeniopygia_guttata
ENSMUSG00000079036Alkbh19962.626ENSTRUG00000022051alkbh19554.301Takifugu_rubripes
ENSMUSG00000079036Alkbh19863.077ENSTNIG00000003557alkbh19456.583Tetraodon_nigroviridis
ENSMUSG00000079036Alkbh110084.576ENSTBEG00000013830ALKBH110084.576Tupaia_belangeri
ENSMUSG00000079036Alkbh19957.732ENSTTRG00000009325ALKBH19957.732Tursiops_truncatus
ENSMUSG00000079036Alkbh110083.033ENSUAMG00000022446ALKBH110083.033Ursus_americanus
ENSMUSG00000079036Alkbh110082.776ENSUMAG00000007173ALKBH110082.776Ursus_maritimus
ENSMUSG00000079036Alkbh19984.021ENSVPAG00000001780ALKBH19984.021Vicugna_pacos
ENSMUSG00000079036Alkbh110083.548ENSVVUG00000004431ALKBH110083.548Vulpes_vulpes
ENSMUSG00000079036Alkbh19965.657ENSXETG00000011086alkbh19058.602Xenopus_tropicalis
ENSMUSG00000079036Alkbh19863.265ENSXCOG00000009419alkbh19956.180Xiphophorus_couchianus
ENSMUSG00000079036Alkbh19863.265ENSXMAG00000015656alkbh19854.359Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000049tRNA binding-ISOFunction
GO:0001701in utero embryonic development18163532.IMPProcess
GO:0001764neuron migration16860792.IDAProcess
GO:0001890placenta development18163532.IMPProcess
GO:0002101tRNA wobble cytosine modification-ISOProcess
GO:0005515protein binding18163532.IPIFunction
GO:0005719nuclear euchromatin21873635.IBAComponent
GO:0005719nuclear euchromatin18163532.IDAComponent
GO:0005739mitochondrion21873635.IBAComponent
GO:0005739mitochondrion-ISOComponent
GO:0006281DNA repair-ISOProcess
GO:0006307DNA dealkylation involved in DNA repair-ISOProcess
GO:0006446regulation of translational initiation-ISOProcess
GO:0006448regulation of translational elongation-ISOProcess
GO:0008198ferrous iron binding21873635.IBAFunction
GO:0008198ferrous iron binding-ISOFunction
GO:0010468regulation of gene expression18163532.IMPProcess
GO:0016706oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors-ISOFunction
GO:0030154cell differentiation18163532.IMPProcess
GO:0031175neuron projection development16860792.IDAProcess
GO:0035516oxidative DNA demethylase activity-ISOFunction
GO:0042056chemoattractant activity16860792.IDAFunction
GO:0042245RNA repair-ISOProcess
GO:0043524negative regulation of neuron apoptotic process16860792.IDAProcess
GO:0048589developmental growth18163532.IMPProcess
GO:0051213dioxygenase activity21873635.IBAFunction
GO:0070129regulation of mitochondrial translation-ISOProcess
GO:0070579methylcytosine dioxygenase activity-ISOFunction
GO:0070989oxidative demethylation-ISOProcess
GO:0080111DNA demethylation-ISOProcess
GO:0140078class I DNA-(apurinic or apyrimidinic site) endonuclease activity-ISOFunction
GO:1990983tRNA demethylation-ISOProcess
GO:1990984tRNA demethylase activity-ISOFunction

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