EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000079065 (Gene tree)
Gene ID: 100042165
Gene Symbol: BC005561
Alias: -
Full Name: cDNA sequence BC005561
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 14260 bases
Position: chr5:104508352-104522611
Accession: 3040669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000130629	Tho2	PF11262.8	4.9e-100	1	1
ENSMUSP00000130629	Thoc2	PF11732.8	3.6e-36	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000096452	-	5409	-	ENSMUSP00000130629	1589 (aa)	-	E9Q5E2

Gene Model

Click here to download ENSMUSG00000079065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000079065's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000079065	BC005561	99	87.942	ENSMUSG00000037475	Thoc2	100	89.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000079065	BC005561	99	89.514	ENSG00000125676	THOC2	100	89.962	Homo_sapiens
ENSMUSG00000079065	BC005561	99	71.168	ENSAPOG00000003459	thoc2	99	71.087	Acanthochromis_polyacanthus
ENSMUSG00000079065	BC005561	99	89.035	ENSAMEG00000014841	THOC2	100	89.480	Ailuropoda_melanoleuca
ENSMUSG00000079065	BC005561	88	71.378	ENSACIG00000015022	thoc2	99	70.901	Amphilophus_citrinellus
ENSMUSG00000079065	BC005561	98	68.842	ENSAOCG00000013305	thoc2	95	73.304	Amphiprion_ocellaris
ENSMUSG00000079065	BC005561	98	68.842	ENSAPEG00000004792	thoc2	95	73.304	Amphiprion_percula
ENSMUSG00000079065	BC005561	99	70.328	ENSATEG00000013110	thoc2	99	70.252	Anabas_testudineus
ENSMUSG00000079065	BC005561	95	82.566	ENSAPLG00000010614	THOC2	100	82.697	Anas_platyrhynchos
ENSMUSG00000079065	BC005561	99	80.162	ENSACAG00000011585	THOC2	99	80.908	Anolis_carolinensis
ENSMUSG00000079065	BC005561	99	87.633	ENSANAG00000022505	-	100	88.394	Aotus_nancymaae
ENSMUSG00000079065	BC005561	99	85.832	ENSANAG00000034037	-	99	87.527	Aotus_nancymaae
ENSMUSG00000079065	BC005561	95	69.094	ENSACLG00000012036	thoc2	100	68.044	Astatotilapia_calliptera
ENSMUSG00000079065	BC005561	99	68.924	ENSAMXG00000014184	thoc2	99	69.727	Astyanax_mexicanus
ENSMUSG00000079065	BC005561	99	89.391	ENSBTAG00000008388	THOC2	100	89.962	Bos_taurus
ENSMUSG00000079065	BC005561	98	87.828	ENSBTAG00000047341	-	98	88.213	Bos_taurus
ENSMUSG00000079065	BC005561	87	32.923	WBGene00015813	thoc-2	80	34.391	Caenorhabditis_elegans
ENSMUSG00000079065	BC005561	99	88.819	ENSCJAG00000016157	THOC2	100	89.335	Callithrix_jacchus
ENSMUSG00000079065	BC005561	99	89.517	ENSCAFG00000018574	THOC2	100	89.962	Canis_familiaris
ENSMUSG00000079065	BC005561	99	89.414	ENSCAFG00020002284	THOC2	99	89.358	Canis_lupus_dingo
ENSMUSG00000079065	BC005561	98	88.326	ENSCHIG00000025851	-	99	89.082	Capra_hircus
ENSMUSG00000079065	BC005561	99	89.401	ENSCHIG00000017733	-	99	89.344	Capra_hircus
ENSMUSG00000079065	BC005561	99	87.634	ENSTSYG00000012292	THOC2	100	87.547	Carlito_syrichta
ENSMUSG00000079065	BC005561	99	86.633	ENSCPOG00000038670	THOC2	99	86.948	Cavia_porcellus
ENSMUSG00000079065	BC005561	99	89.324	ENSCCAG00000021906	THOC2	100	89.837	Cebus_capucinus
ENSMUSG00000079065	BC005561	99	89.577	ENSCATG00000003183	THOC2	100	90.025	Cercocebus_atys
ENSMUSG00000079065	BC005561	99	89.203	ENSCLAG00000002641	THOC2	100	89.586	Chinchilla_lanigera
ENSMUSG00000079065	BC005561	99	89.577	ENSCSAG00000018332	THOC2	100	90.025	Chlorocebus_sabaeus
ENSMUSG00000079065	BC005561	98	81.439	ENSCPBG00000012863	THOC2	99	85.782	Chrysemys_picta_bellii
ENSMUSG00000079065	BC005561	75	57.263	ENSCING00000007364	-	99	57.095	Ciona_intestinalis
ENSMUSG00000079065	BC005561	62	58.284	ENSCSAVG00000007923	-	100	76.064	Ciona_savignyi
ENSMUSG00000079065	BC005561	99	89.577	ENSCANG00000035077	THOC2	100	90.025	Colobus_angolensis_palliatus
ENSMUSG00000079065	BC005561	99	86.894	ENSCGRG00001015509	Thoc2	100	86.991	Cricetulus_griseus_chok1gshd
ENSMUSG00000079065	BC005561	100	93.770	ENSCGRG00001009811	BC005561	99	93.770	Cricetulus_griseus_chok1gshd
ENSMUSG00000079065	BC005561	100	93.833	ENSCGRG00000000980	BC005561	100	93.833	Cricetulus_griseus_crigri
ENSMUSG00000079065	BC005561	98	85.349	ENSCGRG00000001226	Thoc2	99	86.189	Cricetulus_griseus_crigri
ENSMUSG00000079065	BC005561	87	71.695	ENSCSEG00000019946	thoc2	100	71.727	Cynoglossus_semilaevis
ENSMUSG00000079065	BC005561	99	68.110	ENSCVAG00000021509	thoc2	99	68.196	Cyprinodon_variegatus
ENSMUSG00000079065	BC005561	99	71.527	ENSDARG00000037503	thoc2	99	71.402	Danio_rerio
ENSMUSG00000079065	BC005561	99	86.250	ENSDNOG00000012487	THOC2	100	87.695	Dasypus_novemcinctus
ENSMUSG00000079065	BC005561	95	40.895	FBgn0031390	tho2	75	46.209	Drosophila_melanogaster
ENSMUSG00000079065	BC005561	88	79.688	ENSETEG00000016183	THOC2	91	79.668	Echinops_telfairi
ENSMUSG00000079065	BC005561	95	89.835	ENSEASG00005017399	THOC2	100	90.297	Equus_asinus_asinus
ENSMUSG00000079065	BC005561	99	89.460	ENSECAG00000010431	THOC2	100	90.066	Equus_caballus
ENSMUSG00000079065	BC005561	73	95.146	ENSEEUG00000015598	THOC2	78	95.146	Erinaceus_europaeus
ENSMUSG00000079065	BC005561	90	72.911	ENSELUG00000007778	thoc2	96	72.657	Esox_lucius
ENSMUSG00000079065	BC005561	99	89.266	ENSFCAG00000008301	THOC2	100	89.837	Felis_catus
ENSMUSG00000079065	BC005561	99	80.521	ENSFALG00000001519	THOC2	99	80.831	Ficedula_albicollis
ENSMUSG00000079065	BC005561	98	89.618	ENSFDAG00000017237	THOC2	100	90.006	Fukomys_damarensis
ENSMUSG00000079065	BC005561	99	67.275	ENSFHEG00000001695	thoc2	99	67.632	Fundulus_heteroclitus
ENSMUSG00000079065	BC005561	94	69.282	ENSGMOG00000000069	thoc2	99	67.908	Gadus_morhua
ENSMUSG00000079065	BC005561	91	82.888	ENSGALG00000008507	THOC2	98	82.820	Gallus_gallus
ENSMUSG00000079065	BC005561	97	69.593	ENSGAFG00000005902	thoc2	100	68.968	Gambusia_affinis
ENSMUSG00000079065	BC005561	95	69.557	ENSGACG00000020367	thoc2	99	68.459	Gasterosteus_aculeatus
ENSMUSG00000079065	BC005561	98	82.394	ENSGAGG00000024263	THOC2	99	82.714	Gopherus_agassizii
ENSMUSG00000079065	BC005561	99	89.514	ENSGGOG00000000486	THOC2	100	89.962	Gorilla_gorilla
ENSMUSG00000079065	BC005561	92	72.609	ENSHBUG00000003516	thoc2	98	72.359	Haplochromis_burtoni
ENSMUSG00000079065	BC005561	99	88.213	ENSHGLG00000004222	THOC2	100	89.154	Heterocephalus_glaber_female
ENSMUSG00000079065	BC005561	93	90.345	ENSHGLG00100011595	THOC2	93	90.758	Heterocephalus_glaber_male
ENSMUSG00000079065	BC005561	97	69.929	ENSHCOG00000006276	thoc2	99	69.864	Hippocampus_comes
ENSMUSG00000079065	BC005561	99	70.784	ENSIPUG00000015876	thoc2	99	70.721	Ictalurus_punctatus
ENSMUSG00000079065	BC005561	99	89.210	ENSSTOG00000009134	THOC2	100	89.781	Ictidomys_tridecemlineatus
ENSMUSG00000079065	BC005561	99	87.955	ENSJJAG00000017282	Thoc2	100	89.028	Jaculus_jaculus
ENSMUSG00000079065	BC005561	100	87.688	ENSJJAG00000008784	BC005561	100	88.575	Jaculus_jaculus
ENSMUSG00000079065	BC005561	95	67.717	ENSKMAG00000012263	thoc2	99	73.066	Kryptolebias_marmoratus
ENSMUSG00000079065	BC005561	99	70.150	ENSLBEG00000003049	thoc2	98	72.218	Labrus_bergylta
ENSMUSG00000079065	BC005561	98	79.116	ENSLACG00000016494	THOC2	99	79.500	Latimeria_chalumnae
ENSMUSG00000079065	BC005561	99	76.181	ENSLOCG00000014546	thoc2	99	76.356	Lepisosteus_oculatus
ENSMUSG00000079065	BC005561	99	88.826	ENSLAFG00000003146	THOC2	100	89.398	Loxodonta_africana
ENSMUSG00000079065	BC005561	99	89.577	ENSMFAG00000042215	THOC2	100	90.025	Macaca_fascicularis
ENSMUSG00000079065	BC005561	99	89.577	ENSMMUG00000003745	THOC2	100	90.025	Macaca_mulatta
ENSMUSG00000079065	BC005561	99	89.577	ENSMNEG00000033627	THOC2	100	90.025	Macaca_nemestrina
ENSMUSG00000079065	BC005561	99	89.577	ENSMLEG00000034817	THOC2	100	90.025	Mandrillus_leucophaeus
ENSMUSG00000079065	BC005561	95	70.604	ENSMAMG00000012993	thoc2	95	74.730	Mastacembelus_armatus
ENSMUSG00000079065	BC005561	99	71.231	ENSMZEG00005015842	thoc2	99	70.962	Maylandia_zebra
ENSMUSG00000079065	BC005561	98	81.587	ENSMGAG00000007345	THOC2	100	81.726	Meleagris_gallopavo
ENSMUSG00000079065	BC005561	99	88.068	ENSMAUG00000002356	Thoc2	100	88.715	Mesocricetus_auratus
ENSMUSG00000079065	BC005561	99	88.512	ENSMICG00000011840	THOC2	100	89.900	Microcebus_murinus
ENSMUSG00000079065	BC005561	100	93.140	ENSMOCG00000019406	BC005561	100	93.140	Microtus_ochrogaster
ENSMUSG00000079065	BC005561	99	87.767	ENSMOCG00000009946	Thoc2	100	88.589	Microtus_ochrogaster
ENSMUSG00000079065	BC005561	98	68.678	ENSMMOG00000016313	thoc2	96	72.646	Mola_mola
ENSMUSG00000079065	BC005561	99	80.212	ENSMODG00000014984	THOC2	99	81.024	Monodelphis_domestica
ENSMUSG00000079065	BC005561	98	68.243	ENSMALG00000019718	thoc2	99	67.461	Monopterus_albus
ENSMUSG00000079065	BC005561	100	99.182	MGP_CAROLIEiJ_G0027482	BC005561	100	99.182	Mus_caroli
ENSMUSG00000079065	BC005561	99	87.816	MGP_CAROLIEiJ_G0033023	Thoc2	100	89.028	Mus_caroli
ENSMUSG00000079065	BC005561	100	97.231	MGP_PahariEiJ_G0017260	BC005561	100	97.231	Mus_pahari
ENSMUSG00000079065	BC005561	99	87.942	MGP_PahariEiJ_G0031569	Thoc2	100	89.154	Mus_pahari
ENSMUSG00000079065	BC005561	99	87.942	MGP_SPRETEiJ_G0034181	Thoc2	100	89.154	Mus_spretus
ENSMUSG00000079065	BC005561	100	99.874	MGP_SPRETEiJ_G0028479	BC005561	100	99.874	Mus_spretus
ENSMUSG00000079065	BC005561	99	89.069	ENSMPUG00000001357	THOC2	100	89.513	Mustela_putorius_furo
ENSMUSG00000079065	BC005561	94	75.450	ENSMLUG00000028256	-	99	75.150	Myotis_lucifugus
ENSMUSG00000079065	BC005561	98	88.811	ENSMLUG00000013656	-	100	89.835	Myotis_lucifugus
ENSMUSG00000079065	BC005561	90	85.433	ENSMLUG00000027559	-	99	85.542	Myotis_lucifugus
ENSMUSG00000079065	BC005561	95	79.269	ENSMLUG00000026072	-	100	79.468	Myotis_lucifugus
ENSMUSG00000079065	BC005561	99	87.688	ENSNGAG00000016184	Thoc2	100	88.257	Nannospalax_galili
ENSMUSG00000079065	BC005561	100	90.264	ENSNGAG00000010936	BC005561	100	90.138	Nannospalax_galili
ENSMUSG00000079065	BC005561	90	71.319	ENSNBRG00000018089	thoc2	99	71.033	Neolamprologus_brichardi
ENSMUSG00000079065	BC005561	99	83.167	ENSNLEG00000015055	THOC2	100	83.801	Nomascus_leucogenys
ENSMUSG00000079065	BC005561	82	84.104	ENSMEUG00000003533	THOC2	81	84.104	Notamacropus_eugenii
ENSMUSG00000079065	BC005561	99	89.141	ENSODEG00000002478	THOC2	100	89.530	Octodon_degus
ENSMUSG00000079065	BC005561	99	71.330	ENSONIG00000004348	thoc2	99	71.061	Oreochromis_niloticus
ENSMUSG00000079065	BC005561	97	81.614	ENSOANG00000004054	THOC2	100	82.703	Ornithorhynchus_anatinus
ENSMUSG00000079065	BC005561	99	88.638	ENSOCUG00000005996	THOC2	100	89.210	Oryctolagus_cuniculus
ENSMUSG00000079065	BC005561	99	70.101	ENSORLG00000008692	thoc2	99	69.786	Oryzias_latipes
ENSMUSG00000079065	BC005561	99	67.880	ENSORLG00020002321	thoc2	93	74.264	Oryzias_latipes_hni
ENSMUSG00000079065	BC005561	99	68.907	ENSORLG00015000665	thoc2	98	71.601	Oryzias_latipes_hsok
ENSMUSG00000079065	BC005561	99	69.968	ENSOMEG00000004006	thoc2	99	69.381	Oryzias_melastigma
ENSMUSG00000079065	BC005561	99	88.324	ENSOGAG00000000302	THOC2	100	89.774	Otolemur_garnettii
ENSMUSG00000079065	BC005561	98	89.547	ENSOARG00000013665	-	100	90.127	Ovis_aries
ENSMUSG00000079065	BC005561	76	92.063	ENSOARG00000003614	-	96	92.063	Ovis_aries
ENSMUSG00000079065	BC005561	99	87.099	ENSPPAG00000040720	THOC2	99	90.647	Pan_paniscus
ENSMUSG00000079065	BC005561	99	89.203	ENSPPRG00000023137	THOC2	100	89.774	Panthera_pardus
ENSMUSG00000079065	BC005561	99	87.508	ENSPTIG00000006983	THOC2	100	87.131	Panthera_tigris_altaica
ENSMUSG00000079065	BC005561	99	89.391	ENSPTRG00000022246	THOC2	100	90.025	Pan_troglodytes
ENSMUSG00000079065	BC005561	98	86.904	ENSPANG00000004038	THOC2	100	87.365	Papio_anubis
ENSMUSG00000079065	BC005561	93	74.481	ENSPKIG00000021719	thoc2	94	75.084	Paramormyrops_kingsleyae
ENSMUSG00000079065	BC005561	99	81.445	ENSPSIG00000015352	THOC2	98	82.067	Pelodiscus_sinensis
ENSMUSG00000079065	BC005561	98	66.496	ENSPMGG00000002688	thoc2	99	66.752	Periophthalmus_magnuspinnatus
ENSMUSG00000079065	BC005561	100	94.273	ENSPEMG00000011125	BC005561	100	94.273	Peromyscus_maniculatus_bairdii
ENSMUSG00000079065	BC005561	99	87.760	ENSPEMG00000007626	Thoc2	100	88.409	Peromyscus_maniculatus_bairdii
ENSMUSG00000079065	BC005561	99	61.902	ENSPMAG00000007219	-	99	73.134	Petromyzon_marinus
ENSMUSG00000079065	BC005561	62	86.626	ENSPCIG00000007574	THOC2	99	87.742	Phascolarctos_cinereus
ENSMUSG00000079065	BC005561	99	69.886	ENSPFOG00000019556	thoc2	99	69.722	Poecilia_formosa
ENSMUSG00000079065	BC005561	99	68.444	ENSPLAG00000005761	thoc2	99	68.236	Poecilia_latipinna
ENSMUSG00000079065	BC005561	99	68.421	ENSPMEG00000002951	thoc2	99	68.299	Poecilia_mexicana
ENSMUSG00000079065	BC005561	99	70.377	ENSPREG00000021746	thoc2	99	70.063	Poecilia_reticulata
ENSMUSG00000079065	BC005561	99	89.514	ENSPPYG00000020695	THOC2	100	89.962	Pongo_abelii
ENSMUSG00000079065	BC005561	99	75.862	ENSPCAG00000005402	THOC2	100	75.987	Procavia_capensis
ENSMUSG00000079065	BC005561	99	85.094	ENSPCOG00000001806	THOC2	99	86.549	Propithecus_coquereli
ENSMUSG00000079065	BC005561	99	88.324	ENSPVAG00000006132	THOC2	100	88.896	Pteropus_vampyrus
ENSMUSG00000079065	BC005561	95	69.317	ENSPNYG00000019622	thoc2	100	68.261	Pundamilia_nyererei
ENSMUSG00000079065	BC005561	99	67.481	ENSPNAG00000020593	thoc2	99	67.421	Pygocentrus_nattereri
ENSMUSG00000079065	BC005561	99	88.394	ENSRNOG00000007315	Thoc2	100	89.216	Rattus_norvegicus
ENSMUSG00000079065	BC005561	99	97.227	ENSRNOG00000042340	LOC679894	100	97.227	Rattus_norvegicus
ENSMUSG00000079065	BC005561	92	78.125	ENSRBIG00000044129	THOC2	98	86.588	Rhinopithecus_bieti
ENSMUSG00000079065	BC005561	99	89.577	ENSRROG00000041515	THOC2	100	90.025	Rhinopithecus_roxellana
ENSMUSG00000079065	BC005561	99	89.261	ENSSBOG00000007245	THOC2	100	89.837	Saimiri_boliviensis_boliviensis
ENSMUSG00000079065	BC005561	98	80.635	ENSSHAG00000015987	THOC2	100	81.397	Sarcophilus_harrisii
ENSMUSG00000079065	BC005561	99	75.016	ENSSFOG00015004767	THOC2	99	74.890	Scleropages_formosus
ENSMUSG00000079065	BC005561	99	72.682	ENSSFOG00015010127	thoc2	98	76.042	Scleropages_formosus
ENSMUSG00000079065	BC005561	99	70.585	ENSSMAG00000016574	thoc2	99	70.507	Scophthalmus_maximus
ENSMUSG00000079065	BC005561	99	71.294	ENSSDUG00000012815	thoc2	99	72.368	Seriola_dumerili
ENSMUSG00000079065	BC005561	99	71.106	ENSSLDG00000015816	thoc2	99	71.150	Seriola_lalandi_dorsalis
ENSMUSG00000079065	BC005561	95	83.191	ENSSARG00000005799	THOC2	100	83.926	Sorex_araneus
ENSMUSG00000079065	BC005561	99	81.141	ENSSPUG00000012889	THOC2	100	81.576	Sphenodon_punctatus
ENSMUSG00000079065	BC005561	81	75.077	ENSSPAG00000023593	thoc2	91	74.538	Stegastes_partitus
ENSMUSG00000079065	BC005561	99	89.070	ENSSSCG00000012639	THOC2	100	90.140	Sus_scrofa
ENSMUSG00000079065	BC005561	92	82.665	ENSTGUG00000003682	THOC2	100	83.073	Taeniopygia_guttata
ENSMUSG00000079065	BC005561	99	68.900	ENSTRUG00000015122	thoc2	99	68.703	Takifugu_rubripes
ENSMUSG00000079065	BC005561	94	68.995	ENSTNIG00000011794	thoc2	97	69.052	Tetraodon_nigroviridis
ENSMUSG00000079065	BC005561	56	92.562	ENSTBEG00000005854	-	60	92.562	Tupaia_belangeri
ENSMUSG00000079065	BC005561	82	83.474	ENSTBEG00000004420	-	100	84.114	Tupaia_belangeri
ENSMUSG00000079065	BC005561	99	82.434	ENSTTRG00000002762	THOC2	100	84.584	Tursiops_truncatus
ENSMUSG00000079065	BC005561	99	89.401	ENSUAMG00000008780	THOC2	99	89.679	Ursus_americanus
ENSMUSG00000079065	BC005561	96	79.283	ENSUMAG00000024014	THOC2	98	87.238	Ursus_maritimus
ENSMUSG00000079065	BC005561	98	89.484	ENSVPAG00000006247	THOC2	100	90.064	Vicugna_pacos
ENSMUSG00000079065	BC005561	99	89.401	ENSVVUG00000028282	THOC2	99	89.344	Vulpes_vulpes
ENSMUSG00000079065	BC005561	99	75.970	ENSXETG00000016195	thoc2	99	88.274	Xenopus_tropicalis
ENSMUSG00000079065	BC005561	97	69.112	ENSXCOG00000006301	thoc2	100	68.835	Xiphophorus_couchianus
ENSMUSG00000079065	BC005561	97	69.156	ENSXMAG00000011604	thoc2	99	70.484	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000445	THO complex part of transcription export complex	21873635.	IBA	Component
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0006406	mRNA export from nucleus	21873635.	IBA	Process