EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000079259 (Gene tree)
Gene ID: 636931
Gene Symbol: Trim71
Alias: 2610206G21Rik|636931|LOC382112|Lin41|lin-41|mLin41|mlin-41
Full Name: tripartite motif-containing 71
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 57237
Position: chr9: 114507133-114564369
Accession: 2685973
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000111816	-	9332	-	ENSMUSP00000107447	855 (aa)	-	Q1PSW8

Gene Model

Click here to download ENSMUSG00000079259's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05206	MicroRNAs in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000079259's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000082	G1/S transition of mitotic cell cycle	22735451.	IMP	Process
GO:0000209	protein polyubiquitination	21873635.	IBA	Process
GO:0000932	P-body	19898466.22508726.22735451.	IDA	Component
GO:0000932	P-body	-	ISO	Component
GO:0001843	neural tube closure	19098426.	IMP	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0004842	ubiquitin-protein transferase activity	22508726.	IDA	Function
GO:0005515	protein binding	19898466.22508726.22735451.	IPI	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0007275	multicellular organism development	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0008543	fibroblast growth factor receptor signaling pathway	22508726.	IMP	Process
GO:0010586	miRNA metabolic process	22735451.	IDA	Process
GO:0010608	posttranscriptional regulation of gene expression	-	ISO	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0017148	negative regulation of translation	-	ISO	Process
GO:0021915	neural tube development	22508726.	IDA	Process
GO:0030371	translation repressor activity	-	ISO	Function
GO:0031047	gene silencing by RNA	-	IEA	Process
GO:0035196	production of miRNAs involved in gene silencing by miRNA	-	ISO	Process
GO:0035198	miRNA binding	22735451.	IDA	Function
GO:0035198	miRNA binding	-	ISO	Function
GO:0035278	miRNA mediated inhibition of translation	22735451.	IMP	Process
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051246	regulation of protein metabolic process	19898466.	IDA	Process
GO:0051865	protein autoubiquitination	22508726.	IDA	Process
GO:0060964	regulation of gene silencing by miRNA	19898466.	IGI	Process
GO:0060964	regulation of gene silencing by miRNA	22735451.	IMP	Process
GO:0061158	3'-UTR-mediated mRNA destabilization	-	ISO	Process
GO:0061630	ubiquitin protein ligase activity	21873635.	IBA	Function
GO:0061630	ubiquitin protein ligase activity	19898466.22508726.	IDA	Function
GO:0071310	cellular response to organic substance	18604195.	IDA	Process
GO:0072089	stem cell proliferation	22735451.	IMP	Process
GO:2000177	regulation of neural precursor cell proliferation	22508726.	IMP	Process
GO:2000637	positive regulation of gene silencing by miRNA	19898466.	IDA	Process
GO:2000637	positive regulation of gene silencing by miRNA	19898466.	IMP	Process