EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000079658 (Gene tree)
Gene ID: 67923
Gene Symbol: Eloc
Alias: 2610301I15Rik|Tceb1
Full Name: elongin C
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 15318
Position: chr1: 16641725-16657042
Accession: 1915173
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000115352	-	960	XM_006495561	ENSMUSP00000111009	112 (aa)	XP_006495624	P83940
ENSMUST00000186541	-	410	-	-	- (aa)	-	-
ENSMUST00000186701	-	534	-	ENSMUSP00000139741	51 (aa)	-	A0A087WPE4
ENSMUST00000186948	-	641	XM_006495564	ENSMUSP00000140962	112 (aa)	XP_006495627	P83940
ENSMUST00000185393	-	366	-	ENSMUSP00000140161	95 (aa)	-	A0A087WQE6
ENSMUST00000190986	-	384	-	-	- (aa)	-	-
ENSMUST00000187910	-	620	XM_006495558	ENSMUSP00000139480	134 (aa)	XP_006495621	A0A087WNT1
ENSMUST00000191535	-	323	-	-	- (aa)	-	-
ENSMUST00000185771	-	742	XM_006495562	ENSMUSP00000139675	112 (aa)	XP_006495625	P83940
ENSMUST00000188987	-	350	-	-	- (aa)	-	-
ENSMUST00000188641	-	2014	XM_006495563	ENSMUSP00000140422	112 (aa)	XP_006495626	P83940

Gene Model

Click here to download ENSMUSG00000079658's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04066	HIF-1 signaling pathway	KEGG
mmu04120	Ubiquitin mediated proteolysis	KEGG
mmu05170	Human immunodeficiency virus 1 infection	KEGG
mmu05200	Pathways in cancer	KEGG
mmu05211	Renal cell carcinoma	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000079658's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004842	ubiquitin-protein transferase activity	21873635.	IBA	Function
GO:0005515	protein binding	15601820.16498413.	IPI	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006511	ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0030891	VCB complex	-	ISO	Component
GO:0032968	positive regulation of transcription elongation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0070449	elongin complex	21873635.	IBA	Component
GO:0070449	elongin complex	16498413.	IDA	Component