EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000086727 (Gene tree)
Gene ID: 102634473
Gene Symbol: 4931428L18Rik
Alias: -
Full Name: RIKEN cDNA 4931428L18 gene
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 224843 bases
Position: chr1:30997842-31222684
Accession: 1918238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000139433	RRM_1	PF00076.22	3.7e-12	1	1
ENSMUSP00000156852	RRM_1	PF00076.22	3.7e-12	1	1
ENSMUSP00000156897	RRM_1	PF00076.22	3.7e-12	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000152491	-	1163	-	ENSMUSP00000156852	241 (aa)	-	UPI000042874D
ENSMUST00000233331	-	1765	-	ENSMUSP00000156897	241 (aa)	-	UPI000042874D
ENSMUST00000135245	-	889	-	-	- (aa)	-	-
ENSMUST00000127775	-	1009	NR_033445	-	- (aa)	-	-
ENSMUST00000187659	-	423	-	-	- (aa)	-	-
ENSMUST00000188605	-	881	NR_136907	-	- (aa)	-	-
ENSMUST00000187892	-	1717	-	ENSMUSP00000139433	241 (aa)	-	A0A087WNP0

Gene Model

Click here to download ENSMUSG00000086727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000086727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000086727	4931428L18Rik	100	64.685	ENSMUSG00000112856	Gm4305	99	65.385
ENSMUSG00000086727	4931428L18Rik	100	63.986	ENSMUSG00000094314	Gm4301	99	65.385
ENSMUSG00000086727	4931428L18Rik	100	63.230	ENSMUSG00000091101	Gm4302	99	64.261
ENSMUSG00000086727	4931428L18Rik	100	71.698	ENSMUSG00000090854	Gm4340	100	71.321
ENSMUSG00000086727	4931428L18Rik	100	57.676	ENSMUSG00000060244	Alyref2	100	64.050
ENSMUSG00000086727	4931428L18Rik	100	64.685	ENSMUSG00000112931	Gm4303	99	65.385
ENSMUSG00000086727	4931428L18Rik	100	72.797	ENSMUSG00000097427	Gm6763	98	80.420
ENSMUSG00000086727	4931428L18Rik	100	72.797	ENSMUSG00000094144	Gm21312	100	72.414
ENSMUSG00000086727	4931428L18Rik	100	72.797	ENSMUSG00000095022	Gm20765	100	72.414
ENSMUSG00000086727	4931428L18Rik	100	63.986	ENSMUSG00000096640	Gm4312	99	65.385
ENSMUSG00000086727	4931428L18Rik	100	95.021	ENSMUSG00000117091	AC153137.1	100	95.021
ENSMUSG00000086727	4931428L18Rik	100	72.797	ENSMUSG00000091779	Gm21293	100	72.414
ENSMUSG00000086727	4931428L18Rik	100	61.977	ENSMUSG00000025134	Alyref	100	64.015
ENSMUSG00000086727	4931428L18Rik	100	64.685	ENSMUSG00000096744	Gm4307	99	65.385
ENSMUSG00000086727	4931428L18Rik	100	72.797	ENSMUSG00000097878	Gm8764	98	80.420
ENSMUSG00000086727	4931428L18Rik	100	72.797	ENSMUSG00000097550	Gm21304	100	72.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000086727	4931428L18Rik	100	57.955	ENSG00000183684	ALYREF	97	61.278	Homo_sapiens
ENSMUSG00000086727	4931428L18Rik	100	49.818	ENSAPOG00000018455	ALYREF	100	52.688	Acanthochromis_polyacanthus
ENSMUSG00000086727	4931428L18Rik	85	58.491	ENSAMEG00000017463	ALYREF	83	66.667	Ailuropoda_melanoleuca
ENSMUSG00000086727	4931428L18Rik	81	62.051	ENSACAG00000010526	ALYREF	100	56.391	Anolis_carolinensis
ENSMUSG00000086727	4931428L18Rik	100	53.942	ENSANAG00000028229	-	78	58.366	Aotus_nancymaae
ENSMUSG00000086727	4931428L18Rik	75	66.851	ENSANAG00000022638	-	81	65.500	Aotus_nancymaae
ENSMUSG00000086727	4931428L18Rik	100	58.712	ENSBTAG00000008498	ALYREF	100	62.030	Bos_taurus
ENSMUSG00000086727	4931428L18Rik	100	53.788	ENSCJAG00000039942	ALYREF	97	61.278	Callithrix_jacchus
ENSMUSG00000086727	4931428L18Rik	100	57.955	ENSCAFG00000005877	ALYREF	100	61.278	Canis_familiaris
ENSMUSG00000086727	4931428L18Rik	100	57.955	ENSCAFG00020009815	ALYREF	100	61.278	Canis_lupus_dingo
ENSMUSG00000086727	4931428L18Rik	97	59.833	ENSCHIG00000017396	ALYREF	97	61.423	Capra_hircus
ENSMUSG00000086727	4931428L18Rik	74	64.045	ENSTSYG00000002272	ALYREF	70	72.067	Carlito_syrichta
ENSMUSG00000086727	4931428L18Rik	59	72.340	ENSCAPG00000014727	-	100	74.648	Cavia_aperea
ENSMUSG00000086727	4931428L18Rik	100	61.742	ENSCPOG00000013710	ALYREF	100	65.992	Cavia_porcellus
ENSMUSG00000086727	4931428L18Rik	100	59.336	ENSCCAG00000030237	-	100	61.983	Cebus_capucinus
ENSMUSG00000086727	4931428L18Rik	100	56.061	ENSCCAG00000020578	-	97	61.654	Cebus_capucinus
ENSMUSG00000086727	4931428L18Rik	100	57.955	ENSCATG00000033169	ALYREF	97	61.278	Cercocebus_atys
ENSMUSG00000086727	4931428L18Rik	100	57.676	ENSCLAG00000015026	ALYREF	100	63.223	Chinchilla_lanigera
ENSMUSG00000086727	4931428L18Rik	100	57.955	ENSCSAG00000002216	ALYREF	97	61.278	Chlorocebus_sabaeus
ENSMUSG00000086727	4931428L18Rik	74	66.480	ENSCANG00000034056	ALYREF	89	69.022	Colobus_angolensis_palliatus
ENSMUSG00000086727	4931428L18Rik	100	62.357	ENSCGRG00001018191	-	100	64.228	Cricetulus_griseus_chok1gshd
ENSMUSG00000086727	4931428L18Rik	80	69.072	ENSCGRG00000015871	-	100	61.395	Cricetulus_griseus_crigri
ENSMUSG00000086727	4931428L18Rik	68	48.889	ENSCSEG00000015438	-	98	50.000	Cynoglossus_semilaevis
ENSMUSG00000086727	4931428L18Rik	77	62.703	ENSDNOG00000002563	ALYREF	86	65.258	Dasypus_novemcinctus
ENSMUSG00000086727	4931428L18Rik	77	62.903	ENSDORG00000025849	-	73	70.745	Dipodomys_ordii
ENSMUSG00000086727	4931428L18Rik	77	69.189	ENSETEG00000016596	ALYREF	100	70.430	Echinops_telfairi
ENSMUSG00000086727	4931428L18Rik	100	58.333	ENSEASG00005005824	ALYREF	95	61.654	Equus_asinus_asinus
ENSMUSG00000086727	4931428L18Rik	100	58.333	ENSECAG00000018754	ALYREF	95	61.654	Equus_caballus
ENSMUSG00000086727	4931428L18Rik	62	58.480	ENSEEUG00000010164	ALYREF	100	60.819	Erinaceus_europaeus
ENSMUSG00000086727	4931428L18Rik	100	58.712	ENSFCAG00000022549	ALYREF	98	61.654	Felis_catus
ENSMUSG00000086727	4931428L18Rik	78	62.371	ENSFDAG00000001213	ALYREF	90	65.854	Fukomys_damarensis
ENSMUSG00000086727	4931428L18Rik	100	54.198	ENSGALG00000007237	ALYREF	100	62.121	Gallus_gallus
ENSMUSG00000086727	4931428L18Rik	100	50.943	ENSGACG00000013328	ALYREF	100	53.532	Gasterosteus_aculeatus
ENSMUSG00000086727	4931428L18Rik	100	55.303	ENSGAGG00000008536	ALYREF	100	59.176	Gopherus_agassizii
ENSMUSG00000086727	4931428L18Rik	100	58.333	ENSGGOG00000013935	ALYREF	99	61.049	Gorilla_gorilla
ENSMUSG00000086727	4931428L18Rik	100	58.921	ENSHGLG00000008293	ALYREF	100	64.634	Heterocephalus_glaber_female
ENSMUSG00000086727	4931428L18Rik	87	58.190	ENSHGLG00100006949	ALYREF	96	60.086	Heterocephalus_glaber_male
ENSMUSG00000086727	4931428L18Rik	100	50.554	ENSHCOG00000015046	ALYREF	100	52.015	Hippocampus_comes
ENSMUSG00000086727	4931428L18Rik	100	58.712	ENSJJAG00000004134	-	100	61.887	Jaculus_jaculus
ENSMUSG00000086727	4931428L18Rik	100	52.453	ENSLACG00000005694	ALYREF	100	56.343	Latimeria_chalumnae
ENSMUSG00000086727	4931428L18Rik	81	70.769	ENSLAFG00000003083	ALYREF	100	71.429	Loxodonta_africana
ENSMUSG00000086727	4931428L18Rik	100	57.588	ENSMFAG00000001394	ALYREF	97	61.303	Macaca_fascicularis
ENSMUSG00000086727	4931428L18Rik	100	57.955	ENSMMUG00000012884	ALYREF	97	61.278	Macaca_mulatta
ENSMUSG00000086727	4931428L18Rik	100	57.955	ENSMNEG00000043666	ALYREF	97	61.278	Macaca_nemestrina
ENSMUSG00000086727	4931428L18Rik	77	65.054	ENSMLEG00000043353	ALYREF	84	67.539	Mandrillus_leucophaeus
ENSMUSG00000086727	4931428L18Rik	100	63.821	ENSMAUG00000020552	-	100	65.182	Mesocricetus_auratus
ENSMUSG00000086727	4931428L18Rik	100	59.848	ENSMICG00000017403	ALYREF	97	62.642	Microcebus_murinus
ENSMUSG00000086727	4931428L18Rik	100	59.751	ENSMOCG00000016792	-	100	64.344	Microtus_ochrogaster
ENSMUSG00000086727	4931428L18Rik	97	58.527	ENSMODG00000003030	ALYREF	84	60.150	Monodelphis_domestica
ENSMUSG00000086727	4931428L18Rik	100	50.909	ENSMALG00000019408	ALYREF	100	52.364	Monopterus_albus
ENSMUSG00000086727	4931428L18Rik	100	61.977	MGP_CAROLIEiJ_G0017529	Alyref	100	64.015	Mus_caroli
ENSMUSG00000086727	4931428L18Rik	100	61.826	MGP_CAROLIEiJ_G0014874	Alyref2	100	66.529	Mus_caroli
ENSMUSG00000086727	4931428L18Rik	69	61.702	MGP_PahariEiJ_G0018656	-	99	62.766	Mus_pahari
ENSMUSG00000086727	4931428L18Rik	100	61.977	MGP_PahariEiJ_G0018655	-	100	64.015	Mus_pahari
ENSMUSG00000086727	4931428L18Rik	78	82.447	MGP_PahariEiJ_G0027254	-	83	82.320	Mus_pahari
ENSMUSG00000086727	4931428L18Rik	78	82.447	MGP_PahariEiJ_G0027255	-	80	82.320	Mus_pahari
ENSMUSG00000086727	4931428L18Rik	100	61.977	MGP_SPRETEiJ_G0018373	Alyref	100	64.015	Mus_spretus
ENSMUSG00000086727	4931428L18Rik	100	56.846	MGP_SPRETEiJ_G0015679	Alyref2	100	62.810	Mus_spretus
ENSMUSG00000086727	4931428L18Rik	77	63.274	MGP_SPRETEiJ_G0016590	-	100	63.717	Mus_spretus
ENSMUSG00000086727	4931428L18Rik	98	51.037	ENSMLUG00000030407	-	77	52.941	Myotis_lucifugus
ENSMUSG00000086727	4931428L18Rik	98	53.527	ENSMLUG00000025677	-	77	53.782	Myotis_lucifugus
ENSMUSG00000086727	4931428L18Rik	98	48.846	ENSMLUG00000002626	-	98	47.955	Myotis_lucifugus
ENSMUSG00000086727	4931428L18Rik	99	57.377	ENSMLUG00000027516	-	80	53.386	Myotis_lucifugus
ENSMUSG00000086727	4931428L18Rik	98	50.633	ENSMLUG00000015043	-	98	50.633	Myotis_lucifugus
ENSMUSG00000086727	4931428L18Rik	97	55.556	ENSMLUG00000027352	-	79	54.167	Myotis_lucifugus
ENSMUSG00000086727	4931428L18Rik	85	57.767	ENSMLUG00000009555	-	72	64.734	Myotis_lucifugus
ENSMUSG00000086727	4931428L18Rik	100	42.435	ENSMLUG00000023213	-	67	50.000	Myotis_lucifugus
ENSMUSG00000086727	4931428L18Rik	98	53.361	ENSMLUG00000026271	-	79	54.393	Myotis_lucifugus
ENSMUSG00000086727	4931428L18Rik	98	54.622	ENSMLUG00000024976	-	79	55.000	Myotis_lucifugus
ENSMUSG00000086727	4931428L18Rik	98	54.008	ENSMLUG00000024447	-	77	54.008	Myotis_lucifugus
ENSMUSG00000086727	4931428L18Rik	98	50.840	ENSMLUG00000024471	-	82	52.101	Myotis_lucifugus
ENSMUSG00000086727	4931428L18Rik	76	54.348	ENSMLUG00000028343	-	85	55.435	Myotis_lucifugus
ENSMUSG00000086727	4931428L18Rik	98	51.899	ENSMLUG00000022869	-	82	52.743	Myotis_lucifugus
ENSMUSG00000086727	4931428L18Rik	100	58.333	ENSNLEG00000010313	ALYREF	97	61.654	Nomascus_leucogenys
ENSMUSG00000086727	4931428L18Rik	59	60.993	ENSMEUG00000002210	ALYREF	93	53.846	Notamacropus_eugenii
ENSMUSG00000086727	4931428L18Rik	59	70.213	ENSOPRG00000005551	-	52	71.127	Ochotona_princeps
ENSMUSG00000086727	4931428L18Rik	100	57.678	ENSODEG00000008359	ALYREF	100	61.338	Octodon_degus
ENSMUSG00000086727	4931428L18Rik	100	50.903	ENSORLG00000012331	ALYREF	100	52.708	Oryzias_latipes
ENSMUSG00000086727	4931428L18Rik	77	69.519	ENSOGAG00000012409	ALYREF	85	63.721	Otolemur_garnettii
ENSMUSG00000086727	4931428L18Rik	77	63.784	ENSOARG00000017932	ALYREF	74	66.346	Ovis_aries
ENSMUSG00000086727	4931428L18Rik	100	58.712	ENSPPRG00000010829	ALYREF	98	61.654	Panthera_pardus
ENSMUSG00000086727	4931428L18Rik	51	79.032	ENSPTIG00000006399	ALYREF	69	79.032	Panthera_tigris_altaica
ENSMUSG00000086727	4931428L18Rik	100	58.333	ENSPTRG00000009774	ALYREF	97	61.654	Pan_troglodytes
ENSMUSG00000086727	4931428L18Rik	100	57.955	ENSPANG00000019265	ALYREF	97	61.278	Papio_anubis
ENSMUSG00000086727	4931428L18Rik	56	62.222	ENSPSIG00000017541	ALYREF	95	69.565	Pelodiscus_sinensis
ENSMUSG00000086727	4931428L18Rik	100	57.955	ENSPPYG00000008749	ALYREF	97	61.654	Pongo_abelii
ENSMUSG00000086727	4931428L18Rik	100	59.848	ENSPCOG00000020874	ALYREF	97	62.642	Propithecus_coquereli
ENSMUSG00000086727	4931428L18Rik	77	69.189	ENSPVAG00000017866	ALYREF	100	55.849	Pteropus_vampyrus
ENSMUSG00000086727	4931428L18Rik	62	57.803	ENSRNOG00000036687	Alyref	91	60.465	Rattus_norvegicus
ENSMUSG00000086727	4931428L18Rik	75	62.431	ENSRBIG00000039651	ALYREF	71	69.945	Rhinopithecus_bieti
ENSMUSG00000086727	4931428L18Rik	91	60.444	ENSRROG00000045364	ALYREF	85	64.317	Rhinopithecus_roxellana
ENSMUSG00000086727	4931428L18Rik	83	65.000	ENSSHAG00000010459	ALYREF	93	70.213	Sarcophilus_harrisii
ENSMUSG00000086727	4931428L18Rik	100	46.038	ENSSDUG00000003992	-	100	47.566	Seriola_dumerili
ENSMUSG00000086727	4931428L18Rik	100	45.802	ENSSLDG00000005386	-	100	47.727	Seriola_lalandi_dorsalis
ENSMUSG00000086727	4931428L18Rik	100	54.340	ENSSPUG00000004600	ALYREF	100	59.176	Sphenodon_punctatus
ENSMUSG00000086727	4931428L18Rik	97	49.254	ENSSPAG00000011178	ALYREF	95	51.838	Stegastes_partitus
ENSMUSG00000086727	4931428L18Rik	100	59.316	ENSSSCG00000032655	ALYREF	100	61.887	Sus_scrofa
ENSMUSG00000086727	4931428L18Rik	56	67.407	ENSTGUG00000003513	ALYREF	95	71.533	Taeniopygia_guttata
ENSMUSG00000086727	4931428L18Rik	100	50.735	ENSTRUG00000008828	ALYREF	100	52.574	Takifugu_rubripes
ENSMUSG00000086727	4931428L18Rik	77	67.568	ENSTBEG00000005834	ALYREF	100	69.519	Tupaia_belangeri
ENSMUSG00000086727	4931428L18Rik	100	57.576	ENSTTRG00000012275	ALYREF	100	61.278	Tursiops_truncatus
ENSMUSG00000086727	4931428L18Rik	89	49.315	ENSUAMG00000016931	ALYREF	64	63.333	Ursus_americanus
ENSMUSG00000086727	4931428L18Rik	89	49.772	ENSUMAG00000016384	ALYREF	63	63.889	Ursus_maritimus
ENSMUSG00000086727	4931428L18Rik	100	57.787	ENSXETG00000005391	alyref	100	60.976	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process