EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000090272 (Gene tree)
Gene ID: 100040462
Gene Symbol: Mndal
Alias: Ifi212
Full Name: myeloid nuclear differentiation antigen like
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 93366
Position: chr1: 173849126-173942491
Accession: 3780953
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000190651	-	762	-	ENSMUSP00000140191	184 (aa)	-	A0A087WQG9
ENSMUST00000111210	-	1907	-	ENSMUSP00000106841	538 (aa)	-	D0QMC3
ENSMUST00000190071	-	931	-	ENSMUSP00000141055	129 (aa)	-	A0A087WSH9
ENSMUST00000188804	-	2026	XM_006496598	ENSMUSP00000140610	538 (aa)	XP_006496661	D0QMC3
ENSMUST00000220623	-	512	-	-	- (aa)	-	-
ENSMUST00000187636	-	667	-	-	- (aa)	-	-
ENSMUST00000189474	-	1353	-	-	- (aa)	-	-
ENSMUST00000191500	-	367	-	-	- (aa)	-	-
ENSMUST00000186442	-	1646	XM_006496599	ENSMUSP00000140539	485 (aa)	XP_006496662	A0A087WRA4
ENSMUST00000189501	-	860	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000090272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000090272's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000090272	Mndal	84	61.628	ENSG00000163565	IFI16	95	62.025	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISO	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	-	ISO	Function
GO:0002218	activation of innate immune response	-	IEA	Process
GO:0003690	double-stranded DNA binding	-	ISO	Function
GO:0005634	nucleus	19654412.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0008134	transcription factor binding	-	ISO	Function
GO:0030308	negative regulation of cell growth	19654412.	IMP	Process
GO:0035458	cellular response to interferon-beta	-	IEA	Process
GO:0040008	regulation of growth	-	IEA	Process
GO:0042802	identical protein binding	-	ISO	Function