EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000090290 (Gene tree)
Gene ID: 212728
Gene Symbol: Tarbp1
Alias: Gm17296
Full Name: TAR RNA binding protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 49737 bases
Position: chr8:126425329-126475065
Accession: 4936930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000129815	SpoU_methylase	PF00588.19	3.6e-30	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000170518	-	6383	XM_006530817	ENSMUSP00000129815	1579 (aa)	XP_006530880	E9Q368

Gene Model

Click here to download ENSMUSG00000090290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000090290's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000090290	Tarbp1	99	72.604	ENSG00000059588	TARBP1	99	72.542	Homo_sapiens
ENSMUSG00000090290	Tarbp1	99	41.753	ENSAPOG00000016419	si:dkey-85a20.4	86	44.640	Acanthochromis_polyacanthus
ENSMUSG00000090290	Tarbp1	86	76.341	ENSAMEG00000003359	TARBP1	99	76.341	Ailuropoda_melanoleuca
ENSMUSG00000090290	Tarbp1	95	42.330	ENSATEG00000020266	si:dkey-85a20.4	94	42.330	Anabas_testudineus
ENSMUSG00000090290	Tarbp1	85	62.016	ENSAPLG00000007666	TARBP1	99	62.881	Anas_platyrhynchos
ENSMUSG00000090290	Tarbp1	98	53.890	ENSACAG00000001142	TARBP1	98	54.167	Anolis_carolinensis
ENSMUSG00000090290	Tarbp1	93	73.055	ENSANAG00000022031	TARBP1	99	68.365	Aotus_nancymaae
ENSMUSG00000090290	Tarbp1	99	71.446	ENSBTAG00000004517	TARBP1	99	76.367	Bos_taurus
ENSMUSG00000090290	Tarbp1	99	72.092	ENSCJAG00000018155	TARBP1	99	72.153	Callithrix_jacchus
ENSMUSG00000090290	Tarbp1	90	73.810	ENSCAFG00000011533	TARBP1	99	74.308	Canis_familiaris
ENSMUSG00000090290	Tarbp1	99	71.181	ENSCAFG00020027141	TARBP1	99	71.614	Canis_lupus_dingo
ENSMUSG00000090290	Tarbp1	99	70.962	ENSCHIG00000011437	TARBP1	99	71.208	Capra_hircus
ENSMUSG00000090290	Tarbp1	82	75.307	ENSTSYG00000010382	TARBP1	96	75.307	Carlito_syrichta
ENSMUSG00000090290	Tarbp1	81	67.241	ENSCAPG00000010831	TARBP1	99	67.476	Cavia_aperea
ENSMUSG00000090290	Tarbp1	99	72.226	ENSCPOG00000013995	TARBP1	99	73.292	Cavia_porcellus
ENSMUSG00000090290	Tarbp1	96	79.564	ENSCCAG00000037278	TARBP1	99	72.446	Cebus_capucinus
ENSMUSG00000090290	Tarbp1	99	71.965	ENSCATG00000011754	TARBP1	100	72.274	Cercocebus_atys
ENSMUSG00000090290	Tarbp1	85	76.835	ENSCLAG00000003655	TARBP1	96	77.064	Chinchilla_lanigera
ENSMUSG00000090290	Tarbp1	81	76.016	ENSCSAG00000010100	TARBP1	99	76.016	Chlorocebus_sabaeus
ENSMUSG00000090290	Tarbp1	94	60.453	ENSCPBG00000005587	TARBP1	98	60.693	Chrysemys_picta_bellii
ENSMUSG00000090290	Tarbp1	86	76.015	ENSCANG00000034343	TARBP1	99	76.015	Colobus_angolensis_palliatus
ENSMUSG00000090290	Tarbp1	99	88.579	ENSCGRG00001016690	Tarbp1	99	88.579	Cricetulus_griseus_chok1gshd
ENSMUSG00000090290	Tarbp1	98	88.117	ENSCGRG00000016893	Tarbp1	99	88.117	Cricetulus_griseus_crigri
ENSMUSG00000090290	Tarbp1	99	39.668	ENSCSEG00000005255	si:dkey-85a20.4	99	46.347	Cynoglossus_semilaevis
ENSMUSG00000090290	Tarbp1	89	44.888	ENSDARG00000079055	si:dkey-85a20.4	99	54.296	Danio_rerio
ENSMUSG00000090290	Tarbp1	99	69.782	ENSDNOG00000008637	TARBP1	99	69.982	Dasypus_novemcinctus
ENSMUSG00000090290	Tarbp1	82	74.189	ENSDORG00000007984	Tarbp1	100	74.189	Dipodomys_ordii
ENSMUSG00000090290	Tarbp1	99	73.832	ENSEASG00005000252	TARBP1	99	74.081	Equus_asinus_asinus
ENSMUSG00000090290	Tarbp1	99	73.469	ENSECAG00000023673	TARBP1	99	75.717	Equus_caballus
ENSMUSG00000090290	Tarbp1	99	40.657	ENSELUG00000012193	si:dkey-85a20.4	86	43.966	Esox_lucius
ENSMUSG00000090290	Tarbp1	99	69.468	ENSFCAG00000014183	TARBP1	99	69.839	Felis_catus
ENSMUSG00000090290	Tarbp1	82	63.008	ENSFALG00000013565	TARBP1	99	62.969	Ficedula_albicollis
ENSMUSG00000090290	Tarbp1	81	73.282	ENSFDAG00000001308	TARBP1	99	73.435	Fukomys_damarensis
ENSMUSG00000090290	Tarbp1	99	37.012	ENSFHEG00000007565	si:dkey-85a20.4	78	54.444	Fundulus_heteroclitus
ENSMUSG00000090290	Tarbp1	85	43.425	ENSGMOG00000004549	si:dkey-85a20.4	98	43.497	Gadus_morhua
ENSMUSG00000090290	Tarbp1	99	55.091	ENSGALG00000011000	TARBP1	99	56.125	Gallus_gallus
ENSMUSG00000090290	Tarbp1	92	42.790	ENSGAFG00000007387	si:dkey-85a20.4	90	42.867	Gambusia_affinis
ENSMUSG00000090290	Tarbp1	88	44.476	ENSGACG00000005865	si:dkey-85a20.4	99	44.569	Gasterosteus_aculeatus
ENSMUSG00000090290	Tarbp1	99	62.084	ENSGAGG00000012102	TARBP1	99	62.125	Gopherus_agassizii
ENSMUSG00000090290	Tarbp1	86	73.958	ENSGGOG00000022879	TARBP1	99	73.958	Gorilla_gorilla
ENSMUSG00000090290	Tarbp1	87	45.442	ENSHBUG00000008877	si:dkey-85a20.4	85	45.442	Haplochromis_burtoni
ENSMUSG00000090290	Tarbp1	99	73.480	ENSHGLG00000011592	TARBP1	99	74.232	Heterocephalus_glaber_female
ENSMUSG00000090290	Tarbp1	97	74.341	ENSHGLG00100015169	TARBP1	99	74.205	Heterocephalus_glaber_male
ENSMUSG00000090290	Tarbp1	87	42.357	ENSIPUG00000005249	si:dkey-85a20.4	83	42.368	Ictalurus_punctatus
ENSMUSG00000090290	Tarbp1	89	74.256	ENSSTOG00000032291	TARBP1	99	74.330	Ictidomys_tridecemlineatus
ENSMUSG00000090290	Tarbp1	97	73.497	ENSJJAG00000017840	Tarbp1	99	73.497	Jaculus_jaculus
ENSMUSG00000090290	Tarbp1	79	47.152	ENSKMAG00000017546	si:dkey-85a20.4	82	47.152	Kryptolebias_marmoratus
ENSMUSG00000090290	Tarbp1	67	48.939	ENSLBEG00000012132	si:dkey-85a20.4	86	48.939	Labrus_bergylta
ENSMUSG00000090290	Tarbp1	99	48.869	ENSLACG00000004337	TARBP1	99	48.960	Latimeria_chalumnae
ENSMUSG00000090290	Tarbp1	99	45.388	ENSLOCG00000016214	si:dkey-85a20.4	100	45.205	Lepisosteus_oculatus
ENSMUSG00000090290	Tarbp1	96	69.791	ENSLAFG00000011394	TARBP1	99	70.918	Loxodonta_africana
ENSMUSG00000090290	Tarbp1	99	70.380	ENSMFAG00000041068	TARBP1	100	70.504	Macaca_fascicularis
ENSMUSG00000090290	Tarbp1	99	69.865	ENSMMUG00000021703	TARBP1	100	69.926	Macaca_mulatta
ENSMUSG00000090290	Tarbp1	99	72.089	ENSMNEG00000045002	TARBP1	100	72.150	Macaca_nemestrina
ENSMUSG00000090290	Tarbp1	86	75.737	ENSMLEG00000044182	TARBP1	100	75.737	Mandrillus_leucophaeus
ENSMUSG00000090290	Tarbp1	93	42.933	ENSMAMG00000021760	si:dkey-85a20.4	93	42.933	Mastacembelus_armatus
ENSMUSG00000090290	Tarbp1	87	45.512	ENSMZEG00005005751	si:dkey-85a20.4	85	45.512	Maylandia_zebra
ENSMUSG00000090290	Tarbp1	100	87.215	ENSMAUG00000020968	Tarbp1	100	87.215	Mesocricetus_auratus
ENSMUSG00000090290	Tarbp1	99	65.201	ENSMICG00000015280	TARBP1	99	65.408	Microcebus_murinus
ENSMUSG00000090290	Tarbp1	100	86.637	ENSMOCG00000004128	Tarbp1	100	86.637	Microtus_ochrogaster
ENSMUSG00000090290	Tarbp1	99	40.971	ENSMMOG00000007795	si:dkey-85a20.4	99	40.909	Mola_mola
ENSMUSG00000090290	Tarbp1	99	63.559	ENSMODG00000008504	TARBP1	99	63.576	Monodelphis_domestica
ENSMUSG00000090290	Tarbp1	99	41.538	ENSMALG00000002916	si:dkey-85a20.4	85	44.468	Monopterus_albus
ENSMUSG00000090290	Tarbp1	100	97.087	MGP_CAROLIEiJ_G0031729	Tarbp1	100	97.087	Mus_caroli
ENSMUSG00000090290	Tarbp1	100	95.572	MGP_PahariEiJ_G0023326	Tarbp1	100	95.572	Mus_pahari
ENSMUSG00000090290	Tarbp1	100	98.543	MGP_SPRETEiJ_G0032846	Tarbp1	100	98.543	Mus_spretus
ENSMUSG00000090290	Tarbp1	78	74.899	ENSMPUG00000002802	TARBP1	99	74.899	Mustela_putorius_furo
ENSMUSG00000090290	Tarbp1	86	71.083	ENSMLUG00000002414	TARBP1	99	71.293	Myotis_lucifugus
ENSMUSG00000090290	Tarbp1	99	72.480	ENSNLEG00000002518	TARBP1	99	72.418	Nomascus_leucogenys
ENSMUSG00000090290	Tarbp1	66	71.888	ENSMEUG00000011370	-	67	71.888	Notamacropus_eugenii
ENSMUSG00000090290	Tarbp1	72	78.254	ENSOPRG00000013822	TARBP1	71	78.254	Ochotona_princeps
ENSMUSG00000090290	Tarbp1	99	71.618	ENSODEG00000005238	TARBP1	99	71.745	Octodon_degus
ENSMUSG00000090290	Tarbp1	87	44.954	ENSONIG00000009789	si:dkey-85a20.4	99	44.954	Oreochromis_niloticus
ENSMUSG00000090290	Tarbp1	99	72.384	ENSOCUG00000017418	TARBP1	99	72.632	Oryctolagus_cuniculus
ENSMUSG00000090290	Tarbp1	87	44.051	ENSORLG00000010529	si:dkey-85a20.4	85	44.051	Oryzias_latipes
ENSMUSG00000090290	Tarbp1	87	43.870	ENSORLG00020019264	si:dkey-85a20.4	85	43.870	Oryzias_latipes_hni
ENSMUSG00000090290	Tarbp1	87	43.494	ENSORLG00015003276	si:dkey-85a20.4	85	43.494	Oryzias_latipes_hsok
ENSMUSG00000090290	Tarbp1	99	69.746	ENSOGAG00000002379	TARBP1	99	69.808	Otolemur_garnettii
ENSMUSG00000090290	Tarbp1	92	73.371	ENSOARG00000003434	TARBP1	99	68.667	Ovis_aries
ENSMUSG00000090290	Tarbp1	86	76.510	ENSPPAG00000028097	TARBP1	99	76.510	Pan_paniscus
ENSMUSG00000090290	Tarbp1	99	68.293	ENSPPRG00000013561	TARBP1	99	68.293	Panthera_pardus
ENSMUSG00000090290	Tarbp1	85	75.336	ENSPTIG00000009281	TARBP1	99	75.336	Panthera_tigris_altaica
ENSMUSG00000090290	Tarbp1	99	72.435	ENSPTRG00000002124	TARBP1	99	72.497	Pan_troglodytes
ENSMUSG00000090290	Tarbp1	99	72.335	ENSPANG00000021933	TARBP1	100	72.397	Papio_anubis
ENSMUSG00000090290	Tarbp1	99	42.943	ENSPKIG00000016716	si:dkey-85a20.4	84	46.709	Paramormyrops_kingsleyae
ENSMUSG00000090290	Tarbp1	81	64.536	ENSPSIG00000010699	TARBP1	99	64.536	Pelodiscus_sinensis
ENSMUSG00000090290	Tarbp1	99	88.219	ENSPEMG00000006888	Tarbp1	99	88.219	Peromyscus_maniculatus_bairdii
ENSMUSG00000090290	Tarbp1	90	81.000	ENSPCIG00000029710	TARBP1	98	81.000	Phascolarctos_cinereus
ENSMUSG00000090290	Tarbp1	87	43.785	ENSPFOG00000013020	si:dkey-85a20.4	99	43.935	Poecilia_formosa
ENSMUSG00000090290	Tarbp1	88	43.604	ENSPLAG00000006044	si:dkey-85a20.4	85	43.754	Poecilia_latipinna
ENSMUSG00000090290	Tarbp1	87	43.790	ENSPMEG00000017857	si:dkey-85a20.4	85	43.940	Poecilia_mexicana
ENSMUSG00000090290	Tarbp1	87	43.980	ENSPREG00000022753	si:dkey-85a20.4	85	44.130	Poecilia_reticulata
ENSMUSG00000090290	Tarbp1	90	75.499	ENSPPYG00000000102	TARBP1	99	75.431	Pongo_abelii
ENSMUSG00000090290	Tarbp1	88	64.729	ENSPCAG00000004808	TARBP1	85	87.162	Procavia_capensis
ENSMUSG00000090290	Tarbp1	99	70.012	ENSPCOG00000005666	TARBP1	99	70.136	Propithecus_coquereli
ENSMUSG00000090290	Tarbp1	99	60.661	ENSPVAG00000014798	TARBP1	99	61.284	Pteropus_vampyrus
ENSMUSG00000090290	Tarbp1	87	44.365	ENSPNYG00000019135	si:dkey-85a20.4	85	44.365	Pundamilia_nyererei
ENSMUSG00000090290	Tarbp1	100	86.637	ENSRNOG00000053574	Tarbp1	100	86.637	Rattus_norvegicus
ENSMUSG00000090290	Tarbp1	93	78.788	ENSRBIG00000043362	TARBP1	99	78.788	Rhinopithecus_bieti
ENSMUSG00000090290	Tarbp1	99	70.651	ENSRROG00000029527	TARBP1	99	71.016	Rhinopithecus_roxellana
ENSMUSG00000090290	Tarbp1	88	75.964	ENSSBOG00000034503	TARBP1	99	75.964	Saimiri_boliviensis_boliviensis
ENSMUSG00000090290	Tarbp1	85	68.378	ENSSHAG00000000013	TARBP1	99	68.378	Sarcophilus_harrisii
ENSMUSG00000090290	Tarbp1	86	45.004	ENSSFOG00015002660	si:dkey-85a20.4	97	46.296	Scleropages_formosus
ENSMUSG00000090290	Tarbp1	86	45.331	ENSSMAG00000007081	si:dkey-85a20.4	82	45.403	Scophthalmus_maximus
ENSMUSG00000090290	Tarbp1	99	40.990	ENSSDUG00000023566	si:dkey-85a20.4	99	41.234	Seriola_dumerili
ENSMUSG00000090290	Tarbp1	87	45.205	ENSSLDG00000020200	si:dkey-85a20.4	86	45.205	Seriola_lalandi_dorsalis
ENSMUSG00000090290	Tarbp1	89	76.674	ENSSARG00000012207	TARBP1	89	76.674	Sorex_araneus
ENSMUSG00000090290	Tarbp1	99	59.077	ENSSPUG00000015364	TARBP1	99	59.402	Sphenodon_punctatus
ENSMUSG00000090290	Tarbp1	95	42.546	ENSSPAG00000007213	si:dkey-85a20.4	94	42.546	Stegastes_partitus
ENSMUSG00000090290	Tarbp1	98	73.333	ENSSSCG00000010160	TARBP1	99	73.423	Sus_scrofa
ENSMUSG00000090290	Tarbp1	82	62.969	ENSTGUG00000010214	TARBP1	100	62.969	Taeniopygia_guttata
ENSMUSG00000090290	Tarbp1	92	40.470	ENSTNIG00000016586	si:dkey-85a20.4	99	43.872	Tetraodon_nigroviridis
ENSMUSG00000090290	Tarbp1	92	70.404	ENSTTRG00000008707	TARBP1	96	70.404	Tursiops_truncatus
ENSMUSG00000090290	Tarbp1	84	75.794	ENSUMAG00000006730	TARBP1	99	75.794	Ursus_maritimus
ENSMUSG00000090290	Tarbp1	72	84.848	ENSVPAG00000007665	TARBP1	80	83.168	Vicugna_pacos
ENSMUSG00000090290	Tarbp1	89	73.085	ENSVVUG00000007460	TARBP1	99	73.380	Vulpes_vulpes
ENSMUSG00000090290	Tarbp1	86	52.180	ENSXETG00000016224	tarbp1	99	52.180	Xenopus_tropicalis
ENSMUSG00000090290	Tarbp1	80	47.967	ENSXCOG00000011779	si:dkey-85a20.4	94	48.103	Xiphophorus_couchianus
ENSMUSG00000090290	Tarbp1	66	42.591	ENSXMAG00000009600	si:dkey-85a20.4	100	42.791	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0016423	tRNA (guanine) methyltransferase activity	21873635.	IBA	Function
GO:0030488	tRNA methylation	21873635.	IBA	Process