EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMUSG00000090639 (Gene tree)
Gene ID: -
Gene Symbol: Gm20425
Alias: -
Full Name: predicted gene 20425
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 40100 bases
Position: chr9:103190208-103230307
Accession: 5141890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000127808	MMR_HSR1	PF01926.23	1.1e-06	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000166836	-	3028	-	ENSMUSP00000127808	978 (aa)	-	E9Q035

Gene Model

Click here to download ENSMUSG00000090639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000090639's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000090639	Gm20425	100	72.000	ENSAMEG00000000261	-	98	71.808	Ailuropoda_melanoleuca
ENSMUSG00000090639	Gm20425	100	71.944	ENSCAFG00000006540	-	98	71.853	Canis_familiaris
ENSMUSG00000090639	Gm20425	100	78.513	ENSJJAG00000018609	-	100	78.513	Jaculus_jaculus
ENSMUSG00000090639	Gm20425	100	65.528	ENSLAFG00000012465	-	100	65.528	Loxodonta_africana
ENSMUSG00000090639	Gm20425	98	76.225	ENSMOCG00000006609	-	98	76.225	Microtus_ochrogaster
ENSMUSG00000090639	Gm20425	100	69.800	ENSMLUG00000005332	-	100	70.100	Myotis_lucifugus
ENSMUSG00000090639	Gm20425	100	81.429	ENSNGAG00000024311	-	100	92.937	Nannospalax_galili
ENSMUSG00000090639	Gm20425	98	89.074	ENSRNOG00000030625	Tf	98	89.074	Rattus_norvegicus