Protein ID | Domain | Pfam ID | E-value | Domain number | Total number |
---|---|---|---|---|---|
ENSMUSP00000126224 | RRM_5 | PF13893.6 | 2e-13 | 1 | 3 |
ENSMUSP00000126224 | RRM_5 | PF13893.6 | 2e-13 | 2 | 3 |
ENSMUSP00000126224 | RRM_5 | PF13893.6 | 2e-13 | 3 | 3 |
ENSMUSP00000141300 | RRM_5 | PF13893.6 | 2e-13 | 1 | 3 |
ENSMUSP00000141300 | RRM_5 | PF13893.6 | 2e-13 | 2 | 3 |
ENSMUSP00000141300 | RRM_5 | PF13893.6 | 2e-13 | 3 | 3 |
ENSMUSP00000126224 | RRM_1 | PF00076.22 | 6e-83 | 1 | 4 |
ENSMUSP00000126224 | RRM_1 | PF00076.22 | 6e-83 | 2 | 4 |
ENSMUSP00000126224 | RRM_1 | PF00076.22 | 6e-83 | 3 | 4 |
ENSMUSP00000126224 | RRM_1 | PF00076.22 | 6e-83 | 4 | 4 |
ENSMUSP00000141300 | RRM_1 | PF00076.22 | 6e-83 | 1 | 4 |
ENSMUSP00000141300 | RRM_1 | PF00076.22 | 6e-83 | 2 | 4 |
ENSMUSP00000141300 | RRM_1 | PF00076.22 | 6e-83 | 3 | 4 |
ENSMUSP00000141300 | RRM_1 | PF00076.22 | 6e-83 | 4 | 4 |
ENSMUSP00000141684 | RRM_1 | PF00076.22 | 2.3e-40 | 1 | 2 |
ENSMUSP00000141684 | RRM_1 | PF00076.22 | 2.3e-40 | 2 | 2 |
ENSMUSP00000141854 | RRM_1 | PF00076.22 | 2.5e-08 | 1 | 1 |
Transcript ID | Name | Length | RefSeq ID | Protein ID | Length | RefSeq ID | UniportKB ID |
---|---|---|---|---|---|---|---|
ENSMUST00000166505 | - | 5218 | XM_011239969 | ENSMUSP00000126224 | 370 (aa) | XP_011238271 | G5E8X2 |
ENSMUST00000195436 | - | 723 | - | ENSMUSP00000141684 | 172 (aa) | - | A0A0A6YWT2 |
ENSMUST00000192793 | - | 5252 | - | ENSMUSP00000141300 | 370 (aa) | - | G5E8X2 |
ENSMUST00000195537 | - | 467 | - | ENSMUSP00000141854 | 50 (aa) | - | A0A0A6YX62 |
Ensembl ID | Gene Symbol | Coverage | Identiy | Paralog | Gene Symbol | Coverage | Identiy |
---|---|---|---|---|---|---|---|
ENSMUSG00000090919 | Pabpc4l | 52 | 31.461 | ENSMUSG00000028676 | Srsf10 | 50 | 32.500 |
ENSMUSG00000090919 | Pabpc4l | 96 | 38.636 | ENSMUSG00000068856 | Sf3b4 | 54 | 38.636 |
ENSMUSG00000090919 | Pabpc4l | 97 | 69.277 | ENSMUSG00000022283 | Pabpc1 | 96 | 71.901 |
ENSMUSG00000090919 | Pabpc4l | 95 | 30.539 | ENSMUSG00000071337 | Tia1 | 95 | 30.000 |
ENSMUSG00000090919 | Pabpc4l | 83 | 34.286 | ENSMUSG00000031167 | Rbm3 | 90 | 35.385 |
ENSMUSG00000090919 | Pabpc4l | 94 | 33.333 | ENSMUSG00000030846 | Tial1 | 99 | 31.618 |
ENSMUSG00000090919 | Pabpc4l | 98 | 64.497 | ENSMUSG00000046173 | Pabpc6 | 58 | 64.497 |
ENSMUSG00000090919 | Pabpc4l | 96 | 30.065 | ENSMUSG00000028546 | Elavl4 | 70 | 35.484 |
ENSMUSG00000090919 | Pabpc4l | 94 | 30.464 | ENSMUSG00000040028 | Elavl1 | 91 | 30.464 |
ENSMUSG00000090919 | Pabpc4l | 95 | 68.098 | ENSMUSG00000051732 | Pabpc2 | 61 | 64.167 |
ENSMUSG00000090919 | Pabpc4l | 97 | 57.865 | ENSMUSG00000034732 | Pabpc5 | 96 | 57.967 |
ENSMUSG00000090919 | Pabpc4l | 99 | 69.041 | ENSMUSG00000011257 | Pabpc4 | 97 | 70.000 |
ENSMUSG00000090919 | Pabpc4l | 96 | 34.940 | ENSMUSG00000008489 | Elavl2 | 89 | 34.940 |
ENSMUSG00000090919 | Pabpc4l | 96 | 36.145 | ENSMUSG00000003410 | Elavl3 | 90 | 36.145 |
ENSMUSG00000090919 | Pabpc4l | 50 | 30.476 | ENSMUSG00000101667 | Gm29289 | 61 | 30.476 |
ENSMUSG00000090919 | Pabpc4l | 95 | 60.736 | ENSMUSG00000054582 | Pabpc1l | 59 | 60.736 |
ENSMUSG00000090919 | Pabpc4l | 89 | 31.875 | ENSMUSG00000028898 | Trnau1ap | 88 | 34.211 |
Ensembl ID | Gene Symbol | Coverage | Identiy | Ortholog | Gene Symbol | Coverage | Identiy | Species |
---|---|---|---|---|---|---|---|---|
ENSMUSG00000090919 | Pabpc4l | 100 | 81.351 | ENSG00000254535 | PABPC4L | 100 | 81.351 | Homo_sapiens |
ENSMUSG00000090919 | Pabpc4l | 100 | 82.000 | ENSANAG00000017199 | PABPC4L | 87 | 80.541 | Aotus_nancymaae |
ENSMUSG00000090919 | Pabpc4l | 100 | 78.488 | ENSBTAG00000046902 | PABPC4L | 99 | 79.404 | Bos_taurus |
ENSMUSG00000090919 | Pabpc4l | 100 | 81.081 | ENSCJAG00000045332 | PABPC4L | 86 | 81.081 | Callithrix_jacchus |
ENSMUSG00000090919 | Pabpc4l | 100 | 74.000 | ENSCAFG00020019182 | - | 55 | 70.349 | Canis_lupus_dingo |
ENSMUSG00000090919 | Pabpc4l | 100 | 78.488 | ENSCHIG00000007231 | PABPC4L | 99 | 79.404 | Capra_hircus |
ENSMUSG00000090919 | Pabpc4l | 98 | 72.836 | ENSCAPG00000000555 | PABPC4L | 100 | 72.836 | Cavia_aperea |
ENSMUSG00000090919 | Pabpc4l | 100 | 70.000 | ENSCPOG00000033167 | PABPC4L | 100 | 70.000 | Cavia_porcellus |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.811 | ENSCCAG00000031681 | PABPC4L | 86 | 80.811 | Cebus_capucinus |
ENSMUSG00000090919 | Pabpc4l | 100 | 77.326 | ENSCLAG00000017628 | PABPC4L | 100 | 76.757 | Chinchilla_lanigera |
ENSMUSG00000090919 | Pabpc4l | 100 | 82.000 | ENSCANG00000037677 | PABPC4L | 99 | 81.395 | Colobus_angolensis_palliatus |
ENSMUSG00000090919 | Pabpc4l | 100 | 92.000 | ENSCGRG00001002070 | Pabpc4l | 100 | 88.108 | Cricetulus_griseus_chok1gshd |
ENSMUSG00000090919 | Pabpc4l | 100 | 92.000 | ENSCGRG00000020086 | Pabpc4l | 100 | 88.108 | Cricetulus_griseus_crigri |
ENSMUSG00000090919 | Pabpc4l | 100 | 79.459 | ENSDNOG00000031077 | PABPC4L | 95 | 79.459 | Dasypus_novemcinctus |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.000 | ENSEASG00005007883 | PABPC4L | 99 | 79.651 | Equus_asinus_asinus |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.000 | ENSECAG00000031416 | PABPC4L | 99 | 79.651 | Equus_caballus |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.000 | ENSFCAG00000028270 | PABPC4L | 99 | 78.591 | Felis_catus |
ENSMUSG00000090919 | Pabpc4l | 100 | 73.256 | ENSFDAG00000019606 | PABPC4L | 99 | 73.256 | Fukomys_damarensis |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.814 | ENSGGOG00000024991 | PABPC4L | 100 | 80.811 | Gorilla_gorilla |
ENSMUSG00000090919 | Pabpc4l | 99 | 75.339 | ENSHGLG00000020104 | PABPC4L | 99 | 75.339 | Heterocephalus_glaber_female |
ENSMUSG00000090919 | Pabpc4l | 99 | 75.339 | ENSHGLG00100020648 | PABPC4L | 99 | 75.339 | Heterocephalus_glaber_male |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.054 | ENSSTOG00000019472 | PABPC4L | 99 | 80.054 | Ictidomys_tridecemlineatus |
ENSMUSG00000090919 | Pabpc4l | 100 | 84.000 | ENSJJAG00000004090 | Pabpc4l | 99 | 77.907 | Jaculus_jaculus |
ENSMUSG00000090919 | Pabpc4l | 100 | 92.000 | ENSMAUG00000016313 | Pabpc4l | 100 | 88.378 | Mesocricetus_auratus |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.270 | ENSMICG00000029683 | PABPC4L | 100 | 80.270 | Microcebus_murinus |
ENSMUSG00000090919 | Pabpc4l | 100 | 90.000 | ENSMOCG00000007551 | Pabpc4l | 100 | 89.459 | Microtus_ochrogaster |
ENSMUSG00000090919 | Pabpc4l | 100 | 98.649 | MGP_CAROLIEiJ_G0024968 | Pabpc4l | 100 | 98.649 | Mus_caroli |
ENSMUSG00000090919 | Pabpc4l | 100 | 98.649 | MGP_PahariEiJ_G0026409 | Pabpc4l | 100 | 98.649 | Mus_pahari |
ENSMUSG00000090919 | Pabpc4l | 100 | 100.000 | MGP_SPRETEiJ_G0025903 | Pabpc4l | 100 | 100.000 | Mus_spretus |
ENSMUSG00000090919 | Pabpc4l | 100 | 75.581 | ENSMLUG00000008254 | PABPC4L | 99 | 75.581 | Myotis_lucifugus |
ENSMUSG00000090919 | Pabpc4l | 100 | 86.000 | ENSNGAG00000001502 | Pabpc4l | 100 | 85.405 | Nannospalax_galili |
ENSMUSG00000090919 | Pabpc4l | 100 | 81.081 | ENSNLEG00000019300 | PABPC4L | 100 | 81.081 | Nomascus_leucogenys |
ENSMUSG00000090919 | Pabpc4l | 100 | 78.000 | ENSOGAG00000026166 | PABPC4L | 100 | 74.595 | Otolemur_garnettii |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.814 | ENSPPAG00000043745 | PABPC4L | 93 | 80.814 | Pan_paniscus |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.000 | ENSPPRG00000018628 | PABPC4L | 99 | 78.320 | Panthera_pardus |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.000 | ENSPTIG00000010106 | PABPC4L | 99 | 78.591 | Panthera_tigris_altaica |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.814 | ENSPTRG00000045513 | - | 78 | 80.805 | Pan_troglodytes |
ENSMUSG00000090919 | Pabpc4l | 100 | 90.000 | ENSPEMG00000012565 | Pabpc4l | 100 | 89.189 | Peromyscus_maniculatus_bairdii |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.811 | ENSPCOG00000025578 | PABPC4L | 100 | 80.811 | Propithecus_coquereli |
ENSMUSG00000090919 | Pabpc4l | 100 | 93.514 | ENSRNOG00000029749 | Pabpc4l | 100 | 93.514 | Rattus_norvegicus |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.814 | ENSRBIG00000030229 | PABPC4L | 99 | 80.814 | Rhinopithecus_bieti |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.814 | ENSRROG00000020367 | PABPC4L | 99 | 80.814 | Rhinopithecus_roxellana |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.541 | ENSSBOG00000016382 | PABPC4L | 100 | 80.541 | Saimiri_boliviensis_boliviensis |
ENSMUSG00000090919 | Pabpc4l | 100 | 80.000 | ENSSSCG00000009067 | PABPC4L | 99 | 73.171 | Sus_scrofa |
ENSMUSG00000090919 | Pabpc4l | 100 | 78.000 | ENSUAMG00000001289 | PABPC4L | 99 | 78.320 | Ursus_americanus |
ENSMUSG00000090919 | Pabpc4l | 100 | 78.000 | ENSUMAG00000014887 | PABPC4L | 99 | 78.320 | Ursus_maritimus |
ENSMUSG00000090919 | Pabpc4l | 100 | 72.000 | ENSVVUG00000011060 | - | 75 | 68.293 | Vulpes_vulpes |
Go ID | Go_term | PubmedID | Evidence | Category |
---|---|---|---|---|
GO:0003723 | RNA binding | 21873635. | IBA | Function |
GO:0003730 | mRNA 3'-UTR binding | 21873635. | IBA | Function |
GO:0005634 | nucleus | 21873635. | IBA | Component |
GO:0005737 | cytoplasm | 21873635. | IBA | Component |
GO:0005829 | cytosol | 21873635. | IBA | Component |
GO:0008143 | poly(A) binding | 21873635. | IBA | Function |
GO:0008150 | biological_process | - | ND | Process |
GO:0008266 | poly(U) RNA binding | 21873635. | IBA | Function |
GO:0010494 | cytoplasmic stress granule | 21873635. | IBA | Component |
GO:1990904 | ribonucleoprotein complex | 21873635. | IBA | Component |