EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000094658 (Gene tree)
Gene ID: 19657
Gene Symbol: Rbmy
Alias: RBM|Rbm1|Rbm1-rs1|Rbmy1a1|Rbmy1a1-rs1
Full Name: RNA binding motif protein%2C Y chromosome
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 11175 bases
Position: chrY:2830680-2841854
Accession: 104732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000097930	RRM_1	PF00076.22	4.8e-18	1	1
ENSMUSP00000130080	RRM_1	PF00076.22	4.8e-18	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000171534	-	1573	-	ENSMUSP00000130080	380 (aa)	-	O35698
ENSMUST00000100360	-	1708	-	ENSMUSP00000097930	380 (aa)	-	O35698

Gene Model

Click here to download ENSMUSG00000094658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000094658's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000094658	Rbmy	100	99.737	ENSMUSG00000091987	Gm10352	100	99.737
ENSMUSG00000094658	Rbmy	100	99.474	ENSMUSG00000102053	Gm4064	100	99.474
ENSMUSG00000094658	Rbmy	89	47.922	ENSMUSG00000031134	Rbmx	95	57.576
ENSMUSG00000094658	Rbmy	89	45.152	ENSMUSG00000049235	Gm7324	91	46.537
ENSMUSG00000094658	Rbmy	88	40.720	ENSMUSG00000073894	Rbmxl2	94	43.272
ENSMUSG00000094658	Rbmy	100	100.000	ENSMUSG00000093987	Gm21704	100	100.000
ENSMUSG00000094658	Rbmy	100	99.737	ENSMUSG00000095852	Gm10256	100	99.737
ENSMUSG00000094658	Rbmy	89	45.429	ENSMUSG00000037070	Rbmxl1	91	46.814
ENSMUSG00000094658	Rbmy	100	100.000	ENSMUSG00000095948	Gm21708	100	100.000
ENSMUSG00000094658	Rbmy	100	99.211	ENSMUSG00000096520	Gm3376	100	99.211
ENSMUSG00000094658	Rbmy	100	99.737	ENSMUSG00000094511	Gm21693	100	99.737
ENSMUSG00000094658	Rbmy	100	100.000	ENSMUSG00000093918	Gm21677	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000094658	Rbmy	87	44.170	ENSG00000234414	RBMY1A1	90	56.757	Homo_sapiens
ENSMUSG00000094658	Rbmy	87	44.170	ENSG00000244395	RBMY1D	90	56.757	Homo_sapiens
ENSMUSG00000094658	Rbmy	87	44.170	ENSG00000242875	RBMY1B	90	56.757	Homo_sapiens
ENSMUSG00000094658	Rbmy	87	43.816	ENSG00000226941	RBMY1J	85	43.816	Homo_sapiens
ENSMUSG00000094658	Rbmy	87	44.170	ENSG00000242389	RBMY1E	90	56.757	Homo_sapiens
ENSMUSG00000094658	Rbmy	87	43.816	ENSG00000169800	RBMY1F	85	43.816	Homo_sapiens
ENSMUSG00000094658	Rbmy	97	46.696	ENSCSAG00000018304	-	77	46.696	Chlorocebus_sabaeus
ENSMUSG00000094658	Rbmy	86	43.182	ENSCSAG00000018310	-	69	44.843	Chlorocebus_sabaeus
ENSMUSG00000094658	Rbmy	93	40.365	ENSPTRG00000043157	-	90	43.000	Pan_troglodytes
ENSMUSG00000094658	Rbmy	87	43.878	ENSPTRG00000051022	-	82	43.878	Pan_troglodytes
ENSMUSG00000094658	Rbmy	93	40.256	ENSPTRG00000045105	-	92	40.256	Pan_troglodytes
ENSMUSG00000094658	Rbmy	93	40.365	ENSPTRG00000047951	-	90	43.000	Pan_troglodytes
ENSMUSG00000094658	Rbmy	87	41.197	ENSPTRG00000046270	-	91	41.197	Pan_troglodytes
ENSMUSG00000094658	Rbmy	87	45.594	ENSPTRG00000042791	-	92	41.369	Pan_troglodytes
ENSMUSG00000094658	Rbmy	93	39.119	ENSPTRG00000050914	-	90	41.311	Pan_troglodytes
ENSMUSG00000094658	Rbmy	87	43.403	ENSPTRG00000046311	-	92	43.403	Pan_troglodytes
ENSMUSG00000094658	Rbmy	87	42.230	ENSPTRG00000047385	-	91	42.230	Pan_troglodytes
ENSMUSG00000094658	Rbmy	87	45.594	ENSPTRG00000051395	-	90	43.333	Pan_troglodytes
ENSMUSG00000094658	Rbmy	85	41.221	ENSPTRG00000049088	-	85	41.221	Pan_troglodytes
ENSMUSG00000094658	Rbmy	97	76.064	ENSRNOG00000060963	Rbmy1j	96	76.064	Rattus_norvegicus
ENSMUSG00000094658	Rbmy	97	42.526	ENSRBIG00000007617	-	95	42.526	Rhinopithecus_bieti
ENSMUSG00000094658	Rbmy	86	42.857	ENSRBIG00000029066	-	94	38.701	Rhinopithecus_bieti
ENSMUSG00000094658	Rbmy	97	39.110	ENSRROG00000029740	-	96	39.110	Rhinopithecus_roxellana

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002244	hematopoietic progenitor cell differentiation	24029230.	IMP	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	14611631.	IDA	Component
GO:0005681	spliceosomal complex	21873635.	IBA	Component
GO:0048026	positive regulation of mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component