EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000096210 (Gene tree)
Gene ID: 14958
Gene Symbol: H1f0
Alias: D130017D06Rik|H1fv
Full Name: H1 histone family%2C member 0
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 2055
Position: chr15: 79028450-79030504
Accession: 95893
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000180086	-	2055	-	ENSMUSP00000137309	194 (aa)	-	P10922

Gene Model

Click here to download ENSMUSG00000096210's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000096210's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000096210	H1f0	73	96.454	ENSG00000189060	H1F0	100	94.845	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000786	nucleosome	-	IEA	Component
GO:0000790	nuclear chromatin	21873635.	IBA	Component
GO:0000790	nuclear chromatin	-	ISO	Component
GO:0003677	DNA binding	-	IEA	Function
GO:0003680	AT DNA binding	11413144.	IMP	Function
GO:0003690	double-stranded DNA binding	21873635.	IBA	Function
GO:0003690	double-stranded DNA binding	16006555.	IMP	Function
GO:0005515	protein binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	9067599.12606334.22868987.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005719	nuclear euchromatin	21873635.	IBA	Component
GO:0005719	nuclear euchromatin	-	ISO	Component
GO:0005730	nucleolus	22868987.	IDA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0006334	nucleosome assembly	-	IEA	Process
GO:0006342	chromatin silencing	-	ISO	Process
GO:0006355	regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0015629	actin cytoskeleton	-	ISO	Component
GO:0016584	nucleosome positioning	21873635.	IBA	Process
GO:0016604	nuclear body	21873635.	IBA	Component
GO:0016604	nuclear body	-	ISO	Component
GO:0017053	transcriptional repressor complex	-	ISO	Component
GO:0030261	chromosome condensation	21873635.	IBA	Process
GO:0031490	chromatin DNA binding	-	ISO	Function
GO:0031492	nucleosomal DNA binding	21873635.	IBA	Function
GO:0031936	negative regulation of chromatin silencing	21873635.	IBA	Process
GO:0045910	negative regulation of DNA recombination	21873635.	IBA	Process
GO:2000679	positive regulation of transcription regulatory region DNA binding	-	ISO	Process