EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000096283 (Gene tree)
Gene ID: 620736
Gene Symbol: Gm6176
Alias: -
Full Name: predicted gene 6176
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 6101 bases
Position: chr7:22050205-22056305
Accession: 3644439
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000137264	RIO1	PF01163.22	0.00051	1	1
ENSMUSP00000147031	RIO1	PF01163.22	0.00051	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000178209	-	906	XM_017312483	ENSMUSP00000137264	301 (aa)	XP_017167972	J3QK59
ENSMUST00000207633	-	1581	-	ENSMUSP00000147031	301 (aa)	-	J3QK59

Gene Model

Click here to download ENSMUSG00000096283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000096283's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000096283	Gm6176	91	39.051	ENSMUSG00000073457	Smok2b	57	39.051
ENSMUSG00000096283	Gm6176	93	39.858	ENSMUSG00000073458	Smok2a	56	39.858
ENSMUSG00000096283	Gm6176	87	39.163	ENSMUSG00000079156	Smok3b	52	39.163
ENSMUSG00000096283	Gm6176	72	32.159	ENSMUSG00000034974	Dapk3	98	32.338
ENSMUSG00000096283	Gm6176	83	33.456	ENSMUSG00000032380	Dapk2	71	33.456
ENSMUSG00000096283	Gm6176	100	97.342	ENSMUSG00000101436	Gm5157	100	97.342
ENSMUSG00000096283	Gm6176	83	31.765	ENSMUSG00000020389	Cdkl3	98	34.574
ENSMUSG00000096283	Gm6176	84	40.711	ENSMUSG00000101361	Gm7356	50	40.711
ENSMUSG00000096283	Gm6176	84	40.711	ENSMUSG00000067941	Gm7168	50	40.711
ENSMUSG00000096283	Gm6176	84	41.107	ENSMUSG00000101307	Gm7358	50	41.107
ENSMUSG00000096283	Gm6176	100	97.342	ENSMUSG00000109060	Gm4513	100	97.342
ENSMUSG00000096283	Gm6176	89	39.700	ENSMUSG00000075598	Smok3c	53	39.700
ENSMUSG00000096283	Gm6176	87	39.163	ENSMUSG00000075599	Smok3a	52	39.163
ENSMUSG00000096283	Gm6176	96	96.181	ENSMUSG00000109516	Gm6882	92	96.181
ENSMUSG00000096283	Gm6176	100	97.342	ENSMUSG00000109396	Gm4565	100	97.342
ENSMUSG00000096283	Gm6176	100	99.668	ENSMUSG00000095363	Gm4567	100	99.668
ENSMUSG00000096283	Gm6176	100	99.668	ENSMUSG00000094682	Gm6902	100	99.668
ENSMUSG00000096283	Gm6176	96	96.181	ENSMUSG00000095683	Gm10662	92	96.181
ENSMUSG00000096283	Gm6176	96	96.181	ENSMUSG00000095976	Gm5891	92	96.181
ENSMUSG00000096283	Gm6176	86	38.462	ENSMUSG00000044624	Gm4922	52	38.462
ENSMUSG00000096283	Gm6176	57	51.429	ENSMUSG00000024969	Mark2	91	51.429
ENSMUSG00000096283	Gm6176	100	99.668	ENSMUSG00000095190	Gm10668	100	99.668

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000096283	Gm6176	93	41.404	ENSBTAG00000052622	-	87	41.404	Bos_taurus
ENSMUSG00000096283	Gm6176	89	41.481	ENSCPOG00000034310	-	83	41.481	Cavia_porcellus
ENSMUSG00000096283	Gm6176	81	45.161	ENSCING00000008201	-	75	45.161	Ciona_intestinalis
ENSMUSG00000096283	Gm6176	91	42.701	ENSCGRG00001007918	-	56	42.701	Cricetulus_griseus_chok1gshd
ENSMUSG00000096283	Gm6176	88	42.803	ENSCGRG00001010553	-	54	42.803	Cricetulus_griseus_chok1gshd
ENSMUSG00000096283	Gm6176	91	38.321	ENSCGRG00001006023	Gm4922	55	38.321	Cricetulus_griseus_chok1gshd
ENSMUSG00000096283	Gm6176	91	38.321	ENSCGRG00000009530	Gm4922	55	38.321	Cricetulus_griseus_crigri
ENSMUSG00000096283	Gm6176	89	39.259	ENSFDAG00000016208	-	65	37.543	Fukomys_damarensis
ENSMUSG00000096283	Gm6176	91	40.511	MGP_CAROLIEiJ_G0021079	-	57	40.511	Mus_caroli
ENSMUSG00000096283	Gm6176	86	37.692	MGP_CAROLIEiJ_G0015144	Gm4922	52	37.692	Mus_caroli
ENSMUSG00000096283	Gm6176	91	40.511	MGP_CAROLIEiJ_G0021080	-	57	40.511	Mus_caroli
ENSMUSG00000096283	Gm6176	91	40.511	MGP_CAROLIEiJ_G0021082	-	57	40.511	Mus_caroli
ENSMUSG00000096283	Gm6176	91	40.511	MGP_CAROLIEiJ_G0021081	-	57	40.511	Mus_caroli
ENSMUSG00000096283	Gm6176	86	39.615	MGP_PahariEiJ_G0023763	Gm4922	53	39.615	Mus_pahari
ENSMUSG00000096283	Gm6176	86	38.077	MGP_SPRETEiJ_G0015952	Gm4922	52	38.077	Mus_spretus
ENSMUSG00000096283	Gm6176	88	44.318	ENSNGAG00000008026	-	53	44.318	Nannospalax_galili
ENSMUSG00000096283	Gm6176	84	39.764	ENSOGAG00000033945	-	99	38.828	Otolemur_garnettii
ENSMUSG00000096283	Gm6176	87	41.065	ENSPEMG00000022024	-	67	41.065	Peromyscus_maniculatus_bairdii
ENSMUSG00000096283	Gm6176	86	39.768	ENSRNOG00000059551	RGD1560718	52	39.768	Rattus_norvegicus
ENSMUSG00000096283	Gm6176	86	39.382	ENSRNOG00000052093	Smok2a	52	39.382	Rattus_norvegicus
ENSMUSG00000096283	Gm6176	93	62.633	ENSRNOG00000028913	AABR07028872.1	89	62.633	Rattus_norvegicus
ENSMUSG00000096283	Gm6176	85	39.689	ENSRNOG00000025799	RGD1560303	52	39.689	Rattus_norvegicus
ENSMUSG00000096283	Gm6176	86	38.697	ENSRNOG00000030145	RGD1561667	51	38.697	Rattus_norvegicus
ENSMUSG00000096283	Gm6176	93	42.553	ENSRNOG00000024200	LOC690235	56	42.553	Rattus_norvegicus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000226	microtubule cytoskeleton organization	21873635.	IBA	Process
GO:0004674	protein serine/threonine kinase activity	21873635.	IBA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0035556	intracellular signal transduction	21873635.	IBA	Process
GO:0050321	tau-protein kinase activity	21873635.	IBA	Function