EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000096520 (Gene tree)
Gene ID: 100041505
Gene Symbol: Gm3376
Alias: -
Full Name: predicted gene 3376
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 11595 bases
Position: chrY:3771673-3783267
Accession: 3781554
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000136808	RRM_1	PF00076.22	1.6e-18	1	1
ENSMUSP00000141183	RRM_1	PF00076.22	1.6e-18	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000186140	-	1576	-	ENSMUSP00000141183	380 (aa)	-	Q60990
ENSMUST00000180202	-	1143	-	ENSMUSP00000136808	380 (aa)	-	Q60990

Gene Model

Click here to download ENSMUSG00000096520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000096520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000096520	Gm3376	100	99.211	ENSMUSG00000095948	Gm21708	100	99.211
ENSMUSG00000096520	Gm3376	100	99.211	ENSMUSG00000093918	Gm21677	100	99.211
ENSMUSG00000096520	Gm3376	89	46.260	ENSMUSG00000037070	Rbmxl1	91	47.645
ENSMUSG00000096520	Gm3376	100	98.947	ENSMUSG00000094511	Gm21693	100	98.947
ENSMUSG00000096520	Gm3376	89	45.983	ENSMUSG00000049235	Gm7324	91	47.368
ENSMUSG00000096520	Gm3376	100	99.474	ENSMUSG00000095852	Gm10256	100	99.474
ENSMUSG00000096520	Gm3376	100	99.211	ENSMUSG00000094658	Rbmy	100	99.211
ENSMUSG00000096520	Gm3376	100	99.474	ENSMUSG00000091987	Gm10352	100	99.474
ENSMUSG00000096520	Gm3376	100	99.211	ENSMUSG00000102053	Gm4064	100	99.211
ENSMUSG00000096520	Gm3376	88	41.551	ENSMUSG00000073894	Rbmxl2	94	44.063
ENSMUSG00000096520	Gm3376	100	99.211	ENSMUSG00000093987	Gm21704	100	99.211
ENSMUSG00000096520	Gm3376	89	48.753	ENSMUSG00000031134	Rbmx	95	59.596

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000096520	Gm3376	87	45.230	ENSG00000242389	RBMY1E	90	59.459	Homo_sapiens
ENSMUSG00000096520	Gm3376	87	45.230	ENSG00000244395	RBMY1D	90	59.459	Homo_sapiens
ENSMUSG00000096520	Gm3376	87	44.876	ENSG00000169800	RBMY1F	85	44.876	Homo_sapiens
ENSMUSG00000096520	Gm3376	87	45.230	ENSG00000234414	RBMY1A1	90	59.459	Homo_sapiens
ENSMUSG00000096520	Gm3376	87	44.876	ENSG00000226941	RBMY1J	85	44.876	Homo_sapiens
ENSMUSG00000096520	Gm3376	87	45.230	ENSG00000242875	RBMY1B	90	59.459	Homo_sapiens
ENSMUSG00000096520	Gm3376	88	41.739	ENSCSAG00000018310	-	69	44.843	Chlorocebus_sabaeus
ENSMUSG00000096520	Gm3376	97	48.018	ENSCSAG00000018304	-	77	48.018	Chlorocebus_sabaeus
ENSMUSG00000096520	Gm3376	87	46.743	ENSPTRG00000051395	-	90	44.333	Pan_troglodytes
ENSMUSG00000096520	Gm3376	93	41.026	ENSPTRG00000045105	-	92	41.026	Pan_troglodytes
ENSMUSG00000096520	Gm3376	87	46.743	ENSPTRG00000042791	-	92	43.125	Pan_troglodytes
ENSMUSG00000096520	Gm3376	93	39.896	ENSPTRG00000050914	-	90	42.295	Pan_troglodytes
ENSMUSG00000096520	Gm3376	85	41.221	ENSPTRG00000049088	-	85	41.221	Pan_troglodytes
ENSMUSG00000096520	Gm3376	87	42.254	ENSPTRG00000046270	-	91	42.254	Pan_troglodytes
ENSMUSG00000096520	Gm3376	87	43.243	ENSPTRG00000047385	-	91	43.243	Pan_troglodytes
ENSMUSG00000096520	Gm3376	87	44.898	ENSPTRG00000051022	-	82	44.898	Pan_troglodytes
ENSMUSG00000096520	Gm3376	87	44.444	ENSPTRG00000046311	-	92	44.444	Pan_troglodytes
ENSMUSG00000096520	Gm3376	93	41.146	ENSPTRG00000047951	-	90	44.000	Pan_troglodytes
ENSMUSG00000096520	Gm3376	93	41.146	ENSPTRG00000043157	-	90	44.000	Pan_troglodytes
ENSMUSG00000096520	Gm3376	97	76.596	ENSRNOG00000060963	Rbmy1j	96	76.596	Rattus_norvegicus
ENSMUSG00000096520	Gm3376	97	42.268	ENSRBIG00000007617	-	95	42.268	Rhinopithecus_bieti
ENSMUSG00000096520	Gm3376	86	41.991	ENSRBIG00000029066	-	94	38.182	Rhinopithecus_bieti
ENSMUSG00000096520	Gm3376	97	39.813	ENSRROG00000029740	-	96	39.813	Rhinopithecus_roxellana

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005681	spliceosomal complex	21873635.	IBA	Component
GO:0048026	positive regulation of mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component