EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000102053 (Gene tree)
Gene ID: 100042849
Gene Symbol: Gm4064
Alias: -
Full Name: predicted gene 4064
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 11041 bases
Position: chrY:2785165-2796205
Accession: 3782239
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000140512	RRM_1	PF00076.22	5.2e-18	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000187482	-	1561	-	ENSMUSP00000140512	380 (aa)	-	A0A087WR82

Gene Model

Click here to download ENSMUSG00000102053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000102053's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000102053	Gm4064	100	99.474	ENSMUSG00000093987	Gm21704	100	99.474
ENSMUSG00000102053	Gm4064	100	99.737	ENSMUSG00000091987	Gm10352	100	99.737
ENSMUSG00000102053	Gm4064	100	99.737	ENSMUSG00000095852	Gm10256	100	99.737
ENSMUSG00000102053	Gm4064	100	99.211	ENSMUSG00000094511	Gm21693	100	99.211
ENSMUSG00000102053	Gm4064	89	47.922	ENSMUSG00000031134	Rbmx	95	58.586
ENSMUSG00000102053	Gm4064	89	45.152	ENSMUSG00000049235	Gm7324	91	46.537
ENSMUSG00000102053	Gm4064	89	45.429	ENSMUSG00000037070	Rbmxl1	91	46.814
ENSMUSG00000102053	Gm4064	100	99.474	ENSMUSG00000095948	Gm21708	100	99.474
ENSMUSG00000102053	Gm4064	100	99.474	ENSMUSG00000094658	Rbmy	100	99.474
ENSMUSG00000102053	Gm4064	88	40.710	ENSMUSG00000073894	Rbmxl2	94	43.272
ENSMUSG00000102053	Gm4064	100	99.474	ENSMUSG00000093918	Gm21677	100	99.474
ENSMUSG00000102053	Gm4064	100	99.211	ENSMUSG00000096520	Gm3376	100	99.211

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000102053	Gm4064	87	43.816	ENSG00000226941	RBMY1J	85	43.816	Homo_sapiens
ENSMUSG00000102053	Gm4064	87	44.170	ENSG00000242875	RBMY1B	90	58.108	Homo_sapiens
ENSMUSG00000102053	Gm4064	87	44.170	ENSG00000234414	RBMY1A1	90	58.108	Homo_sapiens
ENSMUSG00000102053	Gm4064	87	44.170	ENSG00000244395	RBMY1D	90	58.108	Homo_sapiens
ENSMUSG00000102053	Gm4064	87	44.170	ENSG00000242389	RBMY1E	90	58.108	Homo_sapiens
ENSMUSG00000102053	Gm4064	87	43.816	ENSG00000169800	RBMY1F	85	43.816	Homo_sapiens
ENSMUSG00000102053	Gm4064	86	42.727	ENSCSAG00000018310	-	68	44.395	Chlorocebus_sabaeus
ENSMUSG00000102053	Gm4064	97	47.137	ENSCSAG00000018304	-	77	47.137	Chlorocebus_sabaeus
ENSMUSG00000102053	Gm4064	87	43.403	ENSPTRG00000046311	-	90	43.403	Pan_troglodytes
ENSMUSG00000102053	Gm4064	93	40.260	ENSPTRG00000047951	-	90	43.000	Pan_troglodytes
ENSMUSG00000102053	Gm4064	93	40.153	ENSPTRG00000045105	-	92	40.153	Pan_troglodytes
ENSMUSG00000102053	Gm4064	87	41.549	ENSPTRG00000046270	-	91	41.549	Pan_troglodytes
ENSMUSG00000102053	Gm4064	87	47.577	ENSPTRG00000047385	-	92	38.978	Pan_troglodytes
ENSMUSG00000102053	Gm4064	87	45.594	ENSPTRG00000042791	-	92	41.369	Pan_troglodytes
ENSMUSG00000102053	Gm4064	85	40.458	ENSPTRG00000049088	-	85	40.458	Pan_troglodytes
ENSMUSG00000102053	Gm4064	87	43.878	ENSPTRG00000051022	-	82	43.878	Pan_troglodytes
ENSMUSG00000102053	Gm4064	93	40.260	ENSPTRG00000043157	-	90	43.000	Pan_troglodytes
ENSMUSG00000102053	Gm4064	93	39.018	ENSPTRG00000050914	-	90	41.311	Pan_troglodytes
ENSMUSG00000102053	Gm4064	87	45.594	ENSPTRG00000051395	-	90	43.333	Pan_troglodytes
ENSMUSG00000102053	Gm4064	97	75.798	ENSRNOG00000060963	Rbmy1j	96	75.798	Rattus_norvegicus
ENSMUSG00000102053	Gm4064	97	41.237	ENSRBIG00000007617	-	95	41.237	Rhinopithecus_bieti
ENSMUSG00000102053	Gm4064	86	42.424	ENSRBIG00000029066	-	94	38.182	Rhinopithecus_bieti
ENSMUSG00000102053	Gm4064	97	39.623	ENSRROG00000029740	-	96	39.623	Rhinopithecus_roxellana

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005681	spliceosomal complex	21873635.	IBA	Component
GO:0048026	positive regulation of mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component