EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMUSG00000109969 (Gene tree)
Gene ID: -
Gene Symbol: Zscan4-ps3
Alias: -
Full Name: zinc finger and SCAN domain containing 4%2C pseudogene 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 4805 bases
Position: chr7:11609308-11614112
Accession: 3708489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000147528	zf-C2H2	PF00096.26	1.1e-12	1	3
ENSMUSP00000147528	zf-C2H2	PF00096.26	1.1e-12	2	3
ENSMUSP00000147528	zf-C2H2	PF00096.26	1.1e-12	3	3
ENSMUSP00000147528	zf-met	PF12874.7	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000210559	-	2277	-	ENSMUSP00000147528	506 (aa)	-	A0A1B0GRH6

Gene Model

Click here to download ENSMUSG00000109969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000109969's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000109969	Zscan4-ps3	100	98.221	ENSMUSG00000110190	Zscan4-ps2	100	98.221
ENSMUSG00000109969	Zscan4-ps3	100	97.826	ENSMUSG00000054272	Zscan4c	100	97.826
ENSMUSG00000109969	Zscan4-ps3	100	93.281	ENSMUSG00000090714	Zscan4d	100	93.281
ENSMUSG00000109969	Zscan4-ps3	100	98.024	ENSMUSG00000070828	Zscan4f	100	98.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000109969	Zscan4-ps3	97	41.778	ENSCHIG00000017999	-	94	41.778	Capra_hircus
ENSMUSG00000109969	Zscan4-ps3	99	67.134	ENSRNOG00000028214	Zscan4f	99	67.134	Rattus_norvegicus
ENSMUSG00000109969	Zscan4-ps3	98	47.879	ENSRNOG00000059074	LOC691661	96	47.879	Rattus_norvegicus