EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000116048 (Gene tree)
Gene ID
18000
Gene Symbol
Sept2
Alias
Nedd5
Full Name
septin 2
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Plus strand
Length
30741 bases
Position
chr1:93478993-93509733
Accession
97298
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000132850MMR_HSR1PF01926.231.8e-0711
ENSMUSP00000136366MMR_HSR1PF01926.231.8e-0711
ENSMUSP00000127276MMR_HSR1PF01926.232.8e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000168776-3267XM_006529242ENSMUSP00000132850361 (aa)XP_006529305P42208
ENSMUST00000172165-3192-ENSMUSP00000127276321 (aa)-E9Q3V6
ENSMUST00000179353-3219XM_006529240ENSMUSP00000136366361 (aa)XP_006529303P42208
Gene Model
Click here to download ENSMUSG00000116048's gene model file
Pathways
Pathway IDPathway NameSource
mmu05100Bacterial invasion of epithelial cellsKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000116048's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000116048Sept28062.887ENSMUSG00000001833Sept76562.887
ENSMUSG00000116048Sept2100100.000ENSMUSG00000026276Sept2100100.000
ENSMUSG00000116048Sept29340.594ENSMUSG00000050379Sept66943.234
ENSMUSG00000116048Sept29440.656ENSMUSG00000058013Sept116943.234
ENSMUSG00000116048Sept29558.537ENSMUSG00000020486Sept49766.230
ENSMUSG00000116048Sept28265.203ENSMUSG00000116594AC133488.18264.548
ENSMUSG00000116048Sept29142.140ENSMUSG00000022542Sept129243.077
ENSMUSG00000116048Sept29341.447ENSMUSG00000018398Sept87042.812
ENSMUSG00000116048Sept28343.066ENSMUSG00000019917Sept106743.144
ENSMUSG00000116048Sept29258.013ENSMUSG00000072214Sept510066.667
ENSMUSG00000116048Sept29245.104ENSMUSG00000059248Sept99845.104
ENSMUSG00000116048Sept28350.554ENSMUSG00000022456Sept38949.007
ENSMUSG00000116048Sept29352.188ENSMUSG00000000486Sept110064.828
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000116048Sept29687.379ENSAPOG00000001837sept29587.919Acanthochromis_polyacanthus
ENSMUSG00000116048Sept210097.508ENSAMEG00000016539SEPT210097.765Ailuropoda_melanoleuca
ENSMUSG00000116048Sept28692.258ENSACIG00000021718sept29092.258Amphilophus_citrinellus
ENSMUSG00000116048Sept29690.968ENSAOCG00000000954sept29491.098Amphiprion_ocellaris
ENSMUSG00000116048Sept29688.116ENSAPEG00000013904sept29388.623Amphiprion_percula
ENSMUSG00000116048Sept210089.441ENSATEG00000019489sept29989.167Anabas_testudineus
ENSMUSG00000116048Sept29994.704ENSACAG00000001408SEPT29993.889Anolis_carolinensis
ENSMUSG00000116048Sept210097.508ENSANAG00000023789SEPT29996.573Aotus_nancymaae
ENSMUSG00000116048Sept210085.981ENSACLG00000009428sept29986.275Astatotilapia_calliptera
ENSMUSG00000116048Sept29790.446ENSAMXG00000039525sept29392.169Astyanax_mexicanus
ENSMUSG00000116048Sept210097.508ENSBTAG00000002608SEPT210097.507Bos_taurus
ENSMUSG00000116048Sept210098.442ENSCJAG00000006122-9898.423Callithrix_jacchus
ENSMUSG00000116048Sept29898.300ENSCAFG00000012960SEPT210098.300Canis_familiaris
ENSMUSG00000116048Sept210097.516ENSCAFG00020025094-10096.904Canis_lupus_dingo
ENSMUSG00000116048Sept29498.817ENSCHIG00000026614SEPT210096.953Capra_hircus
ENSMUSG00000116048Sept210099.169ENSTSYG00000003579-10099.169Carlito_syrichta
ENSMUSG00000116048Sept210098.754ENSCPOG00000013687-10098.615Cavia_porcellus
ENSMUSG00000116048Sept29978.333ENSCPOG00000034399-10078.333Cavia_porcellus
ENSMUSG00000116048Sept210083.380ENSCCAG00000031252SEPT210084.211Cebus_capucinus
ENSMUSG00000116048Sept210098.615ENSCATG00000033533SEPT210098.615Cercocebus_atys
ENSMUSG00000116048Sept210099.065ENSCLAG00000002255-10098.892Chinchilla_lanigera
ENSMUSG00000116048Sept210071.074ENSCLAG00000003230-9871.350Chinchilla_lanigera
ENSMUSG00000116048Sept210065.374ENSCLAG00000007700-10065.097Chinchilla_lanigera
ENSMUSG00000116048Sept210098.615ENSCSAG00000005773SEPT210098.615Chlorocebus_sabaeus
ENSMUSG00000116048Sept210094.609ENSCHOG00000008715SEPT210094.609Choloepus_hoffmanni
ENSMUSG00000116048Sept210094.099ENSCPBG00000002410SEPT210093.646Chrysemys_picta_bellii
ENSMUSG00000116048Sept25280.723ENSCING00000008866-9980.723Ciona_intestinalis
ENSMUSG00000116048Sept29176.792ENSCSAVG00000003688-9682.746Ciona_savignyi
ENSMUSG00000116048Sept210098.061ENSCANG00000034470SEPT210096.584Colobus_angolensis_palliatus
ENSMUSG00000116048Sept210098.754ENSCGRG00001009996-10098.615Cricetulus_griseus_chok1gshd
ENSMUSG00000116048Sept210098.447ENSCGRG00000014494-10098.305Cricetulus_griseus_crigri
ENSMUSG00000116048Sept29687.702ENSCSEG00000017561sept29588.889Cynoglossus_semilaevis
ENSMUSG00000116048Sept29090.034ENSCVAG00000008351sept28990.034Cyprinodon_variegatus
ENSMUSG00000116048Sept29890.794ENSDARG00000027590sept29588.252Danio_rerio
ENSMUSG00000116048Sept210097.508ENSDNOG00000013772SEPT210097.507Dasypus_novemcinctus
ENSMUSG00000116048Sept210099.688ENSDORG00000000106-10099.446Dipodomys_ordii
ENSMUSG00000116048Sept27698.230ENSETEG00000001868-7698.230Echinops_telfairi
ENSMUSG00000116048Sept29780.556ENSEBUG00000006082sept27582.184Eptatretus_burgeri
ENSMUSG00000116048Sept29760.245ENSEBUG00000009786-9663.284Eptatretus_burgeri
ENSMUSG00000116048Sept210098.442ENSEASG00005008254SEPT210098.338Equus_asinus_asinus
ENSMUSG00000116048Sept210098.442ENSECAG00000017553SEPT210098.338Equus_caballus
ENSMUSG00000116048Sept29787.097ENSELUG00000018507sept29588.623Esox_lucius
ENSMUSG00000116048Sept210097.507ENSFCAG00000002797SEPT29897.507Felis_catus
ENSMUSG00000116048Sept210095.031ENSFALG00000003429SEPT210095.028Ficedula_albicollis
ENSMUSG00000116048Sept210099.065ENSFDAG00000005819SEPT210098.892Fukomys_damarensis
ENSMUSG00000116048Sept29786.533ENSFHEG00000017419sept29586.982Fundulus_heteroclitus
ENSMUSG00000116048Sept29790.735ENSGMOG00000017631sept28691.940Gadus_morhua
ENSMUSG00000116048Sept29995.312ENSGALG00000005809SEPT29995.278Gallus_gallus
ENSMUSG00000116048Sept210085.358ENSGAFG00000018172sept29986.275Gambusia_affinis
ENSMUSG00000116048Sept210087.578ENSGACG00000015721sept29390.208Gasterosteus_aculeatus
ENSMUSG00000116048Sept210094.720ENSGAGG00000004594SEPT210094.199Gopherus_agassizii
ENSMUSG00000116048Sept210098.615ENSGGOG00000004597SEPT210098.615Gorilla_gorilla
ENSMUSG00000116048Sept210085.373ENSHBUG00000007012sept29985.255Haplochromis_burtoni
ENSMUSG00000116048Sept210099.065ENSHGLG00000005291SEPT210098.892Heterocephalus_glaber_female
ENSMUSG00000116048Sept210087.535ENSHGLG00000014923-10087.535Heterocephalus_glaber_female
ENSMUSG00000116048Sept210099.065ENSHGLG00100018899SEPT210098.892Heterocephalus_glaber_male
ENSMUSG00000116048Sept210087.535ENSHGLG00100001715-10087.535Heterocephalus_glaber_male
ENSMUSG00000116048Sept210089.198ENSIPUG00000017270sept210088.251Ictalurus_punctatus
ENSMUSG00000116048Sept210099.065ENSSTOG00000013357SEPT210099.162Ictidomys_tridecemlineatus
ENSMUSG00000116048Sept210098.754ENSJJAG00000019868-10098.615Jaculus_jaculus
ENSMUSG00000116048Sept29790.705ENSKMAG00000002786sept29890.000Kryptolebias_marmoratus
ENSMUSG00000116048Sept29787.220ENSLBEG00000007372sept29588.959Labrus_bergylta
ENSMUSG00000116048Sept29486.188ENSLOCG00000006303sept29586.158Lepisosteus_oculatus
ENSMUSG00000116048Sept210096.262ENSLAFG00000030960-10096.122Loxodonta_africana
ENSMUSG00000116048Sept210097.819ENSLAFG00000011964-10097.784Loxodonta_africana
ENSMUSG00000116048Sept210098.615ENSMFAG00000039700SEPT210098.615Macaca_fascicularis
ENSMUSG00000116048Sept210098.615ENSMMUG00000004736SEPT210098.615Macaca_mulatta
ENSMUSG00000116048Sept210098.615ENSMNEG00000004313SEPT210098.615Macaca_nemestrina
ENSMUSG00000116048Sept210098.615ENSMLEG00000043469SEPT210098.615Mandrillus_leucophaeus
ENSMUSG00000116048Sept29789.809ENSMAMG00000004271sept29490.801Mastacembelus_armatus
ENSMUSG00000116048Sept210088.820ENSMZEG00005005022sept29988.611Maylandia_zebra
ENSMUSG00000116048Sept29995.312ENSMGAG00000003759SEPT29994.972Meleagris_gallopavo
ENSMUSG00000116048Sept210098.754ENSMAUG00000011950-10098.045Mesocricetus_auratus
ENSMUSG00000116048Sept210098.615ENSMICG00000000909SEPT210098.615Microcebus_murinus
ENSMUSG00000116048Sept210099.169ENSMOCG00000014906-10099.169Microtus_ochrogaster
ENSMUSG00000116048Sept29887.252ENSMMOG00000018068sept29588.166Mola_mola
ENSMUSG00000116048Sept29897.134ENSMODG00000016041SEPT29796.591Monodelphis_domestica
ENSMUSG00000116048Sept29790.446ENSMALG00000002736sept29890.057Monopterus_albus
ENSMUSG00000116048Sept210099.723MGP_CAROLIEiJ_G0014457-100100.000Mus_caroli
ENSMUSG00000116048Sept210099.446MGP_PahariEiJ_G0027693-100100.000Mus_pahari
ENSMUSG00000116048Sept2100100.000MGP_SPRETEiJ_G0015261-100100.000Mus_spretus
ENSMUSG00000116048Sept210098.338ENSMPUG00000000166SEPT210098.338Mustela_putorius_furo
ENSMUSG00000116048Sept210097.196ENSMLUG00000007108SEPT210097.486Myotis_lucifugus
ENSMUSG00000116048Sept210098.892ENSNGAG00000022412-10098.892Nannospalax_galili
ENSMUSG00000116048Sept210088.820ENSNBRG00000003359sept29988.611Neolamprologus_brichardi
ENSMUSG00000116048Sept210098.615ENSNLEG00000013873SEPT210098.615Nomascus_leucogenys
ENSMUSG00000116048Sept29690.228ENSMEUG00000016519-9790.228Notamacropus_eugenii
ENSMUSG00000116048Sept28890.780ENSMEUG00000007833-10090.780Notamacropus_eugenii
ENSMUSG00000116048Sept210095.664ENSOPRG00000013796SEPT210095.664Ochotona_princeps
ENSMUSG00000116048Sept210097.523ENSODEG00000019855-10097.521Octodon_degus
ENSMUSG00000116048Sept210098.131ENSODEG00000018677-10098.131Octodon_degus
ENSMUSG00000116048Sept210098.754ENSODEG00000010316-10098.754Octodon_degus
ENSMUSG00000116048Sept210088.820ENSONIG00000010605sept29988.611Oreochromis_niloticus
ENSMUSG00000116048Sept210095.950ENSOANG00000011758-10095.845Ornithorhynchus_anatinus
ENSMUSG00000116048Sept210097.784ENSOCUG00000015500SEPT210097.784Oryctolagus_cuniculus
ENSMUSG00000116048Sept29591.475ENSORLG00000004835sept29792.236Oryzias_latipes
ENSMUSG00000116048Sept29587.421ENSORLG00020003263sept29687.429Oryzias_latipes_hni
ENSMUSG00000116048Sept29587.421ENSORLG00015006412sept29687.429Oryzias_latipes_hsok
ENSMUSG00000116048Sept29591.803ENSOMEG00000008923sept29591.098Oryzias_melastigma
ENSMUSG00000116048Sept210097.784ENSOGAG00000004457SEPT210097.784Otolemur_garnettii
ENSMUSG00000116048Sept29388.131ENSOARG00000017810-9986.944Ovis_aries
ENSMUSG00000116048Sept210098.615ENSPPAG00000034127SEPT210098.615Pan_paniscus
ENSMUSG00000116048Sept210097.230ENSPPRG00000012154SEPT210097.230Panthera_pardus
ENSMUSG00000116048Sept210097.230ENSPTIG00000004202SEPT210097.230Panthera_tigris_altaica
ENSMUSG00000116048Sept210098.615ENSPTRG00000023481SEPT210095.957Pan_troglodytes
ENSMUSG00000116048Sept210098.615ENSPANG00000007917SEPT210098.615Papio_anubis
ENSMUSG00000116048Sept210085.981ENSPKIG00000002533sept210086.567Paramormyrops_kingsleyae
ENSMUSG00000116048Sept210095.031ENSPSIG00000009642SEPT210094.199Pelodiscus_sinensis
ENSMUSG00000116048Sept29790.705ENSPMGG00000012338sept29290.057Periophthalmus_magnuspinnatus
ENSMUSG00000116048Sept210099.169ENSPEMG00000022937-10099.169Peromyscus_maniculatus_bairdii
ENSMUSG00000116048Sept29897.444ENSPCIG00000005866SEPT29996.375Phascolarctos_cinereus
ENSMUSG00000116048Sept210088.509ENSPFOG00000017007sept29988.333Poecilia_formosa
ENSMUSG00000116048Sept210084.776ENSPLAG00000003540sept29984.987Poecilia_latipinna
ENSMUSG00000116048Sept210084.776ENSPMEG00000003785sept29984.987Poecilia_mexicana
ENSMUSG00000116048Sept210085.358ENSPREG00000007538sept210086.217Poecilia_reticulata
ENSMUSG00000116048Sept210098.338ENSPPYG00000013353SEPT210098.338Pongo_abelii
ENSMUSG00000116048Sept29996.845ENSPCAG00000003337SEPT210096.845Procavia_capensis
ENSMUSG00000116048Sept210095.405ENSPVAG00000000558SEPT210095.405Pteropus_vampyrus
ENSMUSG00000116048Sept210088.509ENSPNYG00000000783sept29988.333Pundamilia_nyererei
ENSMUSG00000116048Sept29790.127ENSPNAG00000010720sept29291.867Pygocentrus_nattereri
ENSMUSG00000116048Sept210098.615ENSRNOG00000017952Sept210098.615Rattus_norvegicus
ENSMUSG00000116048Sept210098.061ENSRBIG00000032420SEPT29198.061Rhinopithecus_bieti
ENSMUSG00000116048Sept210098.061ENSRROG00000031700SEPT210098.061Rhinopithecus_roxellana
ENSMUSG00000116048Sept210098.131ENSSBOG00000016731SEPT210098.061Saimiri_boliviensis_boliviensis
ENSMUSG00000116048Sept29897.444ENSSHAG00000012877SEPT29897.167Sarcophilus_harrisii
ENSMUSG00000116048Sept210085.373ENSSFOG00015018742sept29786.413Scleropages_formosus
ENSMUSG00000116048Sept29790.705ENSSMAG00000007297sept29890.286Scophthalmus_maximus
ENSMUSG00000116048Sept29690.968ENSSDUG00000011223sept29491.098Seriola_dumerili
ENSMUSG00000116048Sept29690.968ENSSLDG00000016125sept29491.098Seriola_lalandi_dorsalis
ENSMUSG00000116048Sept27699.091ENSSARG00000012133-7699.091Sorex_araneus
ENSMUSG00000116048Sept29890.159ENSSPAG00000001557sept29491.098Stegastes_partitus
ENSMUSG00000116048Sept210097.507ENSSSCG00000016370SEPT210097.507Sus_scrofa
ENSMUSG00000116048Sept210094.751ENSTGUG00000006160SEPT210094.751Taeniopygia_guttata
ENSMUSG00000116048Sept29791.083ENSTRUG00000021827sept29491.691Takifugu_rubripes
ENSMUSG00000116048Sept29691.290ENSTNIG00000007849sept29491.395Tetraodon_nigroviridis
ENSMUSG00000116048Sept210097.514ENSUAMG00000017781SEPT210097.514Ursus_americanus
ENSMUSG00000116048Sept210097.784ENSUMAG00000010525SEPT210097.784Ursus_maritimus
ENSMUSG00000116048Sept210098.061ENSVVUG00000022793-10098.061Vulpes_vulpes
ENSMUSG00000116048Sept29890.085ENSXETG00000012166sept29990.085Xenopus_tropicalis
ENSMUSG00000116048Sept210078.177ENSXCOG00000007338sept210078.453Xiphophorus_couchianus
ENSMUSG00000116048Sept210088.509ENSXMAG00000004256sept29988.333Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000145exocyst-ISOComponent
GO:0000166nucleotide binding-IEAFunction
GO:0000775chromosome, centromeric region-IEAComponent
GO:0000776kinetochore-IEAComponent
GO:0002036regulation of L-glutamate import across plasma membrane14723703.IDAProcess
GO:0003924GTPase activity21873635.IBAFunction
GO:0003924GTPase activity9203580.NASFunction
GO:0005515protein binding11739749.14723703.18809578.24302887.IPIFunction
GO:0005525GTP binding-IEAFunction
GO:0005634nucleus-ISOComponent
GO:0005694chromosome-IEAComponent
GO:0005737cytoplasm-ISOComponent
GO:0005826actomyosin contractile ring9203580.NASComponent
GO:0005856cytoskeleton-IEAComponent
GO:0005876spindle microtubule16371649.TASComponent
GO:0005886plasma membrane14723703.IDAComponent
GO:0005929cilium-IEAComponent
GO:0005930axoneme-ISOComponent
GO:0005938cell cortex16371649.TASComponent
GO:0005940septin ring21873635.IBAComponent
GO:0007049cell cycle-IEAProcess
GO:0007224smoothened signaling pathway20558667.IMPProcess
GO:0007283spermatogenesis-IEAProcess
GO:0009986cell surface14723703.IDAComponent
GO:0015629actin cytoskeleton16371649.TASComponent
GO:0015630microtubule cytoskeleton21873635.IBAComponent
GO:0015630microtubule cytoskeleton16371649.TASComponent
GO:0016020membrane-IEAComponent
GO:0030154cell differentiation-IEAProcess
GO:0030234enzyme regulator activity14723703.IDAFunction
GO:0030496midbody16371649.TASComponent
GO:0031105septin complex21873635.IBAComponent
GO:0031105septin complex18809578.IDAComponent
GO:0031105septin complex-ISOComponent
GO:0031175neuron projection development-ISOProcess
GO:0031514motile cilium-IEAComponent
GO:0032391photoreceptor connecting cilium-ISOComponent
GO:0032880regulation of protein localization14723703.IDAProcess
GO:0032880regulation of protein localization22179047.IMPProcess
GO:0035869ciliary transition zone24302887.IDAComponent
GO:0042802identical protein binding-ISOFunction
GO:0042802identical protein binding16371649.TASFunction
GO:0042995cell projection14723703.IDAComponent
GO:0043209myelin sheath17634366.HDAComponent
GO:0045202synapse11739749.IDAComponent
GO:0048471perinuclear region of cytoplasm-ISOComponent
GO:0051258protein polymerization16371649.TASProcess
GO:0051301cell division-IEAProcess
GO:0060090molecular adaptor activity21873635.IBAFunction
GO:0060090molecular adaptor activity16371649.IDAFunction
GO:0060170ciliary membrane20558667.IDAComponent
GO:0060271cilium assembly21873635.IBAProcess
GO:0060271cilium assembly20558667.22179047.IMPProcess
GO:0061640cytoskeleton-dependent cytokinesis21873635.IBAProcess
GO:0061640cytoskeleton-dependent cytokinesis9203580.NASProcess
GO:0097227sperm annulus-ISOComponent
GO:0097730non-motile cilium-ISOComponent

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