EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000116564 (Gene tree)
Gene ID: 67045
Gene Symbol: Riok2
Alias: 2010110K24Rik|2410085M17Rik
Full Name: RIO kinase 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 20591 bases
Position: chr17:17374309-17394899
Accession: 67045
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000156350	RIO1	PF01163.22	1.3e-54	1	1
ENSMUSP00000024620	RIO1	PF01163.22	1.4e-54	1	1
ENSMUSP00000155859	RIO1	PF01163.22	6.2e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000024620	-	3220	-	ENSMUSP00000024620	547 (aa)	-	Q9CQS5
ENSMUST00000232396	-	1596	-	ENSMUSP00000156350	477 (aa)	-	UPI000DE7E510
ENSMUST00000232199	-	620	-	ENSMUSP00000155859	129 (aa)	-	UPI000DE7C88D

Gene Model

Click here to download ENSMUSG00000116564's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000116564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000116564	Riok2	100	93.798	ENSG00000058729	RIOK2	100	82.971	Homo_sapiens
ENSMUSG00000116564	Riok2	100	83.721	ENSAPOG00000011797	riok2	100	64.351	Acanthochromis_polyacanthus
ENSMUSG00000116564	Riok2	100	95.349	ENSAMEG00000014615	RIOK2	100	81.341	Ailuropoda_melanoleuca
ENSMUSG00000116564	Riok2	100	82.946	ENSACIG00000020646	riok2	89	60.137	Amphilophus_citrinellus
ENSMUSG00000116564	Riok2	100	83.721	ENSAOCG00000021840	riok2	100	65.580	Amphiprion_ocellaris
ENSMUSG00000116564	Riok2	100	83.721	ENSAPEG00000020853	riok2	100	65.217	Amphiprion_percula
ENSMUSG00000116564	Riok2	100	84.496	ENSATEG00000005671	riok2	100	64.610	Anabas_testudineus
ENSMUSG00000116564	Riok2	100	86.047	ENSACAG00000011858	RIOK2	100	67.478	Anolis_carolinensis
ENSMUSG00000116564	Riok2	100	92.248	ENSANAG00000015977	RIOK2	100	81.703	Aotus_nancymaae
ENSMUSG00000116564	Riok2	100	83.721	ENSACLG00000002755	riok2	100	64.168	Astatotilapia_calliptera
ENSMUSG00000116564	Riok2	100	82.946	ENSAMXG00000002368	riok2	100	65.511	Astyanax_mexicanus
ENSMUSG00000116564	Riok2	100	93.798	ENSBTAG00000011763	RIOK2	100	82.577	Bos_taurus
ENSMUSG00000116564	Riok2	99	61.719	WBGene00013688	riok-2	59	58.654	Caenorhabditis_elegans
ENSMUSG00000116564	Riok2	100	91.473	ENSCJAG00000040045	RIOK2	100	80.616	Callithrix_jacchus
ENSMUSG00000116564	Riok2	100	94.574	ENSCAFG00000007745	RIOK2	100	80.435	Canis_familiaris
ENSMUSG00000116564	Riok2	100	82.946	ENSCAFG00020015532	-	94	82.558	Canis_lupus_dingo
ENSMUSG00000116564	Riok2	100	94.574	ENSCAFG00020011453	-	100	79.348	Canis_lupus_dingo
ENSMUSG00000116564	Riok2	100	96.124	ENSCHIG00000016709	RIOK2	100	82.428	Capra_hircus
ENSMUSG00000116564	Riok2	100	93.798	ENSTSYG00000001916	RIOK2	100	81.588	Carlito_syrichta
ENSMUSG00000116564	Riok2	100	91.473	ENSCAPG00000006762	RIOK2	100	73.346	Cavia_aperea
ENSMUSG00000116564	Riok2	100	91.473	ENSCPOG00000010551	RIOK2	100	80.581	Cavia_porcellus
ENSMUSG00000116564	Riok2	100	92.248	ENSCCAG00000025712	RIOK2	100	80.435	Cebus_capucinus
ENSMUSG00000116564	Riok2	100	94.574	ENSCATG00000035047	RIOK2	100	83.514	Cercocebus_atys
ENSMUSG00000116564	Riok2	100	89.922	ENSCLAG00000006790	RIOK2	100	80.399	Chinchilla_lanigera
ENSMUSG00000116564	Riok2	100	93.798	ENSCSAG00000014233	RIOK2	100	78.191	Chlorocebus_sabaeus
ENSMUSG00000116564	Riok2	94	95.868	ENSCHOG00000003803	RIOK2	82	86.154	Choloepus_hoffmanni
ENSMUSG00000116564	Riok2	100	85.271	ENSCPBG00000015732	RIOK2	100	69.435	Chrysemys_picta_bellii
ENSMUSG00000116564	Riok2	99	71.094	ENSCING00000002364	-	99	51.002	Ciona_intestinalis
ENSMUSG00000116564	Riok2	99	69.531	ENSCSAVG00000006970	-	100	50.000	Ciona_savignyi
ENSMUSG00000116564	Riok2	100	73.827	ENSCANG00000042169	RIOK2	100	73.827	Colobus_angolensis_palliatus
ENSMUSG00000116564	Riok2	100	97.674	ENSCGRG00001000871	Riok2	100	87.906	Cricetulus_griseus_chok1gshd
ENSMUSG00000116564	Riok2	100	97.674	ENSCGRG00000008541	Riok2	100	87.906	Cricetulus_griseus_crigri
ENSMUSG00000116564	Riok2	100	85.271	ENSCSEG00000014204	riok2	100	64.299	Cynoglossus_semilaevis
ENSMUSG00000116564	Riok2	100	84.496	ENSCVAG00000012034	riok2	100	65.265	Cyprinodon_variegatus
ENSMUSG00000116564	Riok2	100	83.721	ENSDARG00000035264	riok2	100	65.201	Danio_rerio
ENSMUSG00000116564	Riok2	100	93.798	ENSDNOG00000037305	RIOK2	100	81.374	Dasypus_novemcinctus
ENSMUSG00000116564	Riok2	100	93.798	ENSDORG00000016345	Riok2	100	81.353	Dipodomys_ordii
ENSMUSG00000116564	Riok2	99	61.719	FBgn0039306	RIOK2	99	45.709	Drosophila_melanogaster
ENSMUSG00000116564	Riok2	64	97.143	ENSETEG00000013220	-	80	97.143	Echinops_telfairi
ENSMUSG00000116564	Riok2	100	65.891	ENSEBUG00000006099	riok2	82	52.361	Eptatretus_burgeri
ENSMUSG00000116564	Riok2	100	95.349	ENSEASG00005018799	RIOK2	100	81.884	Equus_asinus_asinus
ENSMUSG00000116564	Riok2	100	95.349	ENSECAG00000018441	RIOK2	100	80.797	Equus_caballus
ENSMUSG00000116564	Riok2	88	64.796	ENSEEUG00000013535	RIOK2	88	64.796	Erinaceus_europaeus
ENSMUSG00000116564	Riok2	100	80.620	ENSELUG00000011239	riok2	97	80.000	Esox_lucius
ENSMUSG00000116564	Riok2	100	93.798	ENSFCAG00000024077	RIOK2	100	81.159	Felis_catus
ENSMUSG00000116564	Riok2	100	79.070	ENSFALG00000010277	RIOK2	100	63.873	Ficedula_albicollis
ENSMUSG00000116564	Riok2	100	89.922	ENSFDAG00000015288	RIOK2	100	79.783	Fukomys_damarensis
ENSMUSG00000116564	Riok2	100	82.171	ENSFHEG00000010950	riok2	100	64.182	Fundulus_heteroclitus
ENSMUSG00000116564	Riok2	100	79.845	ENSGMOG00000011354	riok2	100	61.594	Gadus_morhua
ENSMUSG00000116564	Riok2	100	82.171	ENSGALG00000015288	RIOK2	100	64.654	Gallus_gallus
ENSMUSG00000116564	Riok2	100	82.171	ENSGAFG00000012056	riok2	100	64.079	Gambusia_affinis
ENSMUSG00000116564	Riok2	100	81.395	ENSGACG00000009754	riok2	100	63.437	Gasterosteus_aculeatus
ENSMUSG00000116564	Riok2	100	85.271	ENSGAGG00000013791	RIOK2	100	68.972	Gopherus_agassizii
ENSMUSG00000116564	Riok2	100	93.798	ENSGGOG00000022136	RIOK2	100	82.609	Gorilla_gorilla
ENSMUSG00000116564	Riok2	100	83.721	ENSHBUG00000010705	riok2	100	64.168	Haplochromis_burtoni
ENSMUSG00000116564	Riok2	100	91.473	ENSHGLG00000009139	-	100	82.246	Heterocephalus_glaber_female
ENSMUSG00000116564	Riok2	100	91.473	ENSHGLG00100014700	RIOK2	100	82.065	Heterocephalus_glaber_male
ENSMUSG00000116564	Riok2	100	84.496	ENSHCOG00000015555	riok2	100	65.574	Hippocampus_comes
ENSMUSG00000116564	Riok2	100	81.395	ENSIPUG00000007450	riok2	100	65.154	Ictalurus_punctatus
ENSMUSG00000116564	Riok2	100	95.349	ENSSTOG00000006659	RIOK2	100	83.636	Ictidomys_tridecemlineatus
ENSMUSG00000116564	Riok2	100	92.248	ENSJJAG00000016582	Riok2	100	81.884	Jaculus_jaculus
ENSMUSG00000116564	Riok2	100	83.721	ENSKMAG00000013229	riok2	100	65.385	Kryptolebias_marmoratus
ENSMUSG00000116564	Riok2	100	80.620	ENSLBEG00000015421	riok2	100	64.299	Labrus_bergylta
ENSMUSG00000116564	Riok2	100	71.538	ENSLACG00000000274	RIOK2	100	64.875	Latimeria_chalumnae
ENSMUSG00000116564	Riok2	100	82.946	ENSLOCG00000006432	riok2	100	65.832	Lepisosteus_oculatus
ENSMUSG00000116564	Riok2	100	94.574	ENSLAFG00000000919	RIOK2	100	83.152	Loxodonta_africana
ENSMUSG00000116564	Riok2	100	94.574	ENSMFAG00000033056	RIOK2	100	82.971	Macaca_fascicularis
ENSMUSG00000116564	Riok2	100	94.574	ENSMMUG00000000307	RIOK2	100	83.152	Macaca_mulatta
ENSMUSG00000116564	Riok2	100	94.574	ENSMNEG00000029708	RIOK2	100	83.152	Macaca_nemestrina
ENSMUSG00000116564	Riok2	100	94.574	ENSMLEG00000040038	RIOK2	100	81.595	Mandrillus_leucophaeus
ENSMUSG00000116564	Riok2	100	84.496	ENSMAMG00000013310	riok2	100	63.036	Mastacembelus_armatus
ENSMUSG00000116564	Riok2	100	83.721	ENSMZEG00005017067	riok2	100	63.985	Maylandia_zebra
ENSMUSG00000116564	Riok2	100	83.721	ENSMGAG00000006986	RIOK2	99	64.899	Meleagris_gallopavo
ENSMUSG00000116564	Riok2	91	95.726	ENSMAUG00000019527	Riok2	100	95.556	Mesocricetus_auratus
ENSMUSG00000116564	Riok2	100	92.248	ENSMICG00000037437	RIOK2	100	82.278	Microcebus_murinus
ENSMUSG00000116564	Riok2	100	96.124	ENSMOCG00000004230	Riok2	100	87.020	Microtus_ochrogaster
ENSMUSG00000116564	Riok2	100	84.496	ENSMMOG00000018155	riok2	100	64.505	Mola_mola
ENSMUSG00000116564	Riok2	100	91.473	ENSMODG00000015548	RIOK2	100	72.242	Monodelphis_domestica
ENSMUSG00000116564	Riok2	99	82.031	ENSMALG00000011266	riok2	100	62.929	Monopterus_albus
ENSMUSG00000116564	Riok2	100	96.899	ENSMPUG00000004450	RIOK2	100	82.428	Mustela_putorius_furo
ENSMUSG00000116564	Riok2	100	96.899	ENSMLUG00000016113	RIOK2	100	83.213	Myotis_lucifugus
ENSMUSG00000116564	Riok2	100	96.899	ENSNGAG00000017971	Riok2	100	84.058	Nannospalax_galili
ENSMUSG00000116564	Riok2	100	94.574	ENSNLEG00000014474	RIOK2	100	82.640	Nomascus_leucogenys
ENSMUSG00000116564	Riok2	100	77.519	ENSMEUG00000010529	RIOK2	100	53.598	Notamacropus_eugenii
ENSMUSG00000116564	Riok2	100	82.946	ENSONIG00000013689	riok2	100	63.620	Oreochromis_niloticus
ENSMUSG00000116564	Riok2	100	88.372	ENSOANG00000001225	RIOK2	99	72.264	Ornithorhynchus_anatinus
ENSMUSG00000116564	Riok2	80	87.379	ENSOANG00000031051	-	91	87.379	Ornithorhynchus_anatinus
ENSMUSG00000116564	Riok2	100	92.248	ENSOCUG00000001656	RIOK2	100	81.159	Oryctolagus_cuniculus
ENSMUSG00000116564	Riok2	100	81.395	ENSORLG00020011553	riok2	100	63.964	Oryzias_latipes_hni
ENSMUSG00000116564	Riok2	100	80.620	ENSORLG00015001085	riok2	100	63.834	Oryzias_latipes_hsok
ENSMUSG00000116564	Riok2	100	83.721	ENSOMEG00000004617	riok2	100	65.568	Oryzias_melastigma
ENSMUSG00000116564	Riok2	100	89.147	ENSOGAG00000008467	RIOK2	100	76.854	Otolemur_garnettii
ENSMUSG00000116564	Riok2	100	96.124	ENSOARG00000018138	RIOK2	100	82.609	Ovis_aries
ENSMUSG00000116564	Riok2	100	93.798	ENSPPAG00000027414	RIOK2	99	82.906	Pan_paniscus
ENSMUSG00000116564	Riok2	100	93.023	ENSPPRG00000000169	RIOK2	100	80.978	Panthera_pardus
ENSMUSG00000116564	Riok2	100	93.798	ENSPTIG00000008344	RIOK2	100	81.341	Panthera_tigris_altaica
ENSMUSG00000116564	Riok2	100	93.798	ENSPTRG00000017100	RIOK2	100	82.609	Pan_troglodytes
ENSMUSG00000116564	Riok2	100	94.574	ENSPANG00000011977	RIOK2	100	83.333	Papio_anubis
ENSMUSG00000116564	Riok2	100	83.721	ENSPKIG00000016220	riok2	100	65.256	Paramormyrops_kingsleyae
ENSMUSG00000116564	Riok2	100	83.721	ENSPSIG00000013238	RIOK2	100	68.496	Pelodiscus_sinensis
ENSMUSG00000116564	Riok2	100	82.946	ENSPMGG00000021822	riok2	100	63.803	Periophthalmus_magnuspinnatus
ENSMUSG00000116564	Riok2	100	98.450	ENSPEMG00000018872	Riok2	100	88.587	Peromyscus_maniculatus_bairdii
ENSMUSG00000116564	Riok2	100	82.171	ENSPFOG00000017064	riok2	100	63.718	Poecilia_formosa
ENSMUSG00000116564	Riok2	100	82.171	ENSPLAG00000003043	riok2	100	63.036	Poecilia_latipinna
ENSMUSG00000116564	Riok2	100	83.721	ENSPMEG00000007622	riok2	100	63.327	Poecilia_mexicana
ENSMUSG00000116564	Riok2	100	83.721	ENSPREG00000002255	riok2	100	63.214	Poecilia_reticulata
ENSMUSG00000116564	Riok2	100	92.248	ENSPPYG00000015654	RIOK2	100	82.609	Pongo_abelii
ENSMUSG00000116564	Riok2	100	93.798	ENSPCAG00000006508	RIOK2	99	77.677	Procavia_capensis
ENSMUSG00000116564	Riok2	100	93.023	ENSPCOG00000024315	RIOK2	100	83.333	Propithecus_coquereli
ENSMUSG00000116564	Riok2	100	96.899	ENSPVAG00000016658	RIOK2	89	86.241	Pteropus_vampyrus
ENSMUSG00000116564	Riok2	100	83.721	ENSPNYG00000018868	riok2	100	63.985	Pundamilia_nyererei
ENSMUSG00000116564	Riok2	100	83.721	ENSPNAG00000010841	riok2	100	65.018	Pygocentrus_nattereri
ENSMUSG00000116564	Riok2	100	96.899	ENSRNOG00000012692	Riok2	100	89.292	Rattus_norvegicus
ENSMUSG00000116564	Riok2	100	94.574	ENSRBIG00000030658	RIOK2	99	84.000	Rhinopithecus_bieti
ENSMUSG00000116564	Riok2	100	94.574	ENSRROG00000039203	RIOK2	99	83.818	Rhinopithecus_roxellana
ENSMUSG00000116564	Riok2	94	46.457	YNL207W	-	92	41.013	Saccharomyces_cerevisiae
ENSMUSG00000116564	Riok2	100	92.248	ENSSBOG00000032152	RIOK2	100	81.159	Saimiri_boliviensis_boliviensis
ENSMUSG00000116564	Riok2	100	90.698	ENSSHAG00000006935	-	100	71.123	Sarcophilus_harrisii
ENSMUSG00000116564	Riok2	100	86.822	ENSSFOG00015005966	riok2	100	65.901	Scleropages_formosus
ENSMUSG00000116564	Riok2	100	82.946	ENSSMAG00000010529	riok2	100	64.663	Scophthalmus_maximus
ENSMUSG00000116564	Riok2	100	83.721	ENSSDUG00000014891	riok2	100	65.448	Seriola_dumerili
ENSMUSG00000116564	Riok2	100	83.721	ENSSLDG00000001926	riok2	100	65.448	Seriola_lalandi_dorsalis
ENSMUSG00000116564	Riok2	100	92.248	ENSSARG00000001798	RIOK2	100	68.592	Sorex_araneus
ENSMUSG00000116564	Riok2	100	76.744	ENSSPUG00000003509	RIOK2	98	66.898	Sphenodon_punctatus
ENSMUSG00000116564	Riok2	100	83.721	ENSSPAG00000016554	riok2	100	64.818	Stegastes_partitus
ENSMUSG00000116564	Riok2	100	78.295	ENSTGUG00000001223	RIOK2	100	64.505	Taeniopygia_guttata
ENSMUSG00000116564	Riok2	99	81.250	ENSTRUG00000011455	riok2	100	62.791	Takifugu_rubripes
ENSMUSG00000116564	Riok2	100	82.946	ENSTNIG00000015401	riok2	100	58.296	Tetraodon_nigroviridis
ENSMUSG00000116564	Riok2	100	85.271	ENSTTRG00000010640	RIOK2	100	79.783	Tursiops_truncatus
ENSMUSG00000116564	Riok2	100	95.349	ENSUAMG00000008585	RIOK2	100	80.492	Ursus_americanus
ENSMUSG00000116564	Riok2	100	95.349	ENSUMAG00000006726	RIOK2	100	81.522	Ursus_maritimus
ENSMUSG00000116564	Riok2	88	95.408	ENSVPAG00000001542	RIOK2	88	95.408	Vicugna_pacos
ENSMUSG00000116564	Riok2	100	94.574	ENSVVUG00000020170	RIOK2	100	80.435	Vulpes_vulpes
ENSMUSG00000116564	Riok2	100	84.496	ENSXETG00000013194	riok2	100	67.942	Xenopus_tropicalis
ENSMUSG00000116564	Riok2	100	83.721	ENSXCOG00000016879	riok2	100	64.801	Xiphophorus_couchianus
ENSMUSG00000116564	Riok2	100	83.721	ENSXMAG00000007425	riok2	100	64.982	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0004672	protein kinase activity	21873635.	IBA	Function
GO:0004674	protein serine/threonine kinase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006468	protein phosphorylation	-	IEA	Process
GO:0016301	kinase activity	-	IEA	Function
GO:0016310	phosphorylation	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0030071	regulation of mitotic metaphase/anaphase transition	-	ISO	Process
GO:0030490	maturation of SSU-rRNA	21873635.	IBA	Process
GO:0030490	maturation of SSU-rRNA	-	ISO	Process
GO:0030688	preribosome, small subunit precursor	21873635.	IBA	Component
GO:0030688	preribosome, small subunit precursor	-	ISO	Component
GO:0042254	ribosome biogenesis	-	IEA	Process
GO:0042274	ribosomal small subunit biogenesis	-	ISO	Process
GO:0046777	protein autophosphorylation	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:2000208	positive regulation of ribosomal small subunit export from nucleus	-	ISO	Process
GO:2000234	positive regulation of rRNA processing	-	ISO	Process