EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMZEG00005000340 (Gene tree)
Gene ID
101472464
Gene Symbol
-
Alias
-
Full Name
RNA-binding protein Musashi homolog 1
Gene Type
protein_coding
Species
Maylandia_zebra
Status
putative
Strand
Plus strand
Length
19538 bases
Position
chrLG12:3102123-3121660
Accession
101472464
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMZEP00005000318RRM_1PF00076.226.8e-3312
ENSMZEP00005000318RRM_1PF00076.226.8e-3322
ENSMZEP00005000310RRM_1PF00076.228.2e-3312
ENSMZEP00005000310RRM_1PF00076.228.2e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMZET00005000368-3134XM_012921143ENSMZEP00005000310348 (aa)XP_012776597UPI00025FAAE4
ENSMZET00005000377-3077XM_012921145ENSMZEP00005000318329 (aa)XP_012776599UPI00022B0155
Gene Model
Click here to download ENSMZEG00005000340's gene model file
Pathways
Pathway IDPathway NameSource
mze03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005000340's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMZEG00005000340-10083.978ENSG00000135097MSI19987.069Homo_sapiens
ENSMZEG00005000340-10098.854ENSAPOG00000023458-10098.854Acanthochromis_polyacanthus
ENSMZEG00005000340-10092.571ENSAPOG00000003191MSI110092.571Acanthochromis_polyacanthus
ENSMZEG00005000340-9468.232ENSAMEG00000013302MSI110067.956Ailuropoda_melanoleuca
ENSMZEG00005000340-9090.291ENSACIG00000017754-7890.291Amphilophus_citrinellus
ENSMZEG00005000340-10092.571ENSAOCG00000003804MSI110092.571Amphiprion_ocellaris
ENSMZEG00005000340-9492.949ENSAOCG00000009031-9592.949Amphiprion_ocellaris
ENSMZEG00005000340-10098.854ENSAPEG00000006857-8498.854Amphiprion_percula
ENSMZEG00005000340-10092.571ENSAPEG00000003245MSI110092.571Amphiprion_percula
ENSMZEG00005000340-10084.463ENSATEG00000023779-10084.463Anabas_testudineus
ENSMZEG00005000340-10094.930ENSATEG00000017059MSI110094.930Anabas_testudineus
ENSMZEG00005000340-10084.211ENSACAG00000002762MSI110084.765Anolis_carolinensis
ENSMZEG00005000340-10083.978ENSANAG00000027151MSI110083.978Aotus_nancymaae
ENSMZEG00005000340-8284.266ENSANAG00000027901-8884.266Aotus_nancymaae
ENSMZEG00005000340-10092.593ENSACLG00000011230MSI110092.593Astatotilapia_calliptera
ENSMZEG00005000340-100100.000ENSACLG00000000117-100100.000Astatotilapia_calliptera
ENSMZEG00005000340-9493.730ENSAMXG00000038960msi17693.730Astyanax_mexicanus
ENSMZEG00005000340-10083.978ENSBTAG00000009800MSI110086.646Bos_taurus
ENSMZEG00005000340-10083.978ENSCJAG00000008578MSI110086.687Callithrix_jacchus
ENSMZEG00005000340-10083.702ENSCAFG00000010283MSI110083.702Canis_familiaris
ENSMZEG00005000340-9485.531ENSCAFG00020020585MSI110085.531Canis_lupus_dingo
ENSMZEG00005000340-10081.744ENSCHIG00000024304MSI110081.744Capra_hircus
ENSMZEG00005000340-9484.709ENSTSYG00000033949MSI19584.709Carlito_syrichta
ENSMZEG00005000340-9480.220ENSCAPG00000003919MSI17884.615Cavia_aperea
ENSMZEG00005000340-9585.174ENSCPOG00000012361MSI110085.380Cavia_porcellus
ENSMZEG00005000340-10083.978ENSCCAG00000035567MSI110083.978Cebus_capucinus
ENSMZEG00005000340-10083.978ENSCATG00000030019MSI110083.978Cercocebus_atys
ENSMZEG00005000340-9485.380ENSCLAG00000011329MSI110085.380Chinchilla_lanigera
ENSMZEG00005000340-7488.934ENSCSAG00000002265MSI19684.116Chlorocebus_sabaeus
ENSMZEG00005000340-10087.464ENSCPBG00000011349MSI110087.464Chrysemys_picta_bellii
ENSMZEG00005000340-9484.756ENSCANG00000040651MSI110084.756Colobus_angolensis_palliatus
ENSMZEG00005000340-10083.978ENSCGRG00001018883Msi110083.978Cricetulus_griseus_chok1gshd
ENSMZEG00005000340-9484.802ENSCGRG00000002191Msi17284.802Cricetulus_griseus_crigri
ENSMZEG00005000340-10091.714ENSCSEG00000005834-10091.714Cynoglossus_semilaevis
ENSMZEG00005000340-9495.130ENSCSEG00000011032MSI110095.130Cynoglossus_semilaevis
ENSMZEG00005000340-10098.563ENSCSEG00000008352-10098.563Cynoglossus_semilaevis
ENSMZEG00005000340-5466.418ENSCVAG00000017430zgc:1107969466.418Cyprinodon_variegatus
ENSMZEG00005000340-6274.654ENSCVAG00000017463-8974.654Cyprinodon_variegatus
ENSMZEG00005000340-10098.851ENSCVAG00000009100MSI110098.851Cyprinodon_variegatus
ENSMZEG00005000340-7992.558ENSDARG00000102015CABZ01037298.19892.558Danio_rerio
ENSMZEG00005000340-9494.932ENSDARG00000010710msi110094.860Danio_rerio
ENSMZEG00005000340-9482.278ENSDNOG00000005713MSI19182.278Dasypus_novemcinctus
ENSMZEG00005000340-9484.132ENSDORG00000005610Msi19484.132Dipodomys_ordii
ENSMZEG00005000340-9481.707ENSETEG00000004756MSI110081.707Echinops_telfairi
ENSMZEG00005000340-10085.131ENSEASG00005004736MSI110085.131Equus_asinus_asinus
ENSMZEG00005000340-10083.978ENSECAG00000017526MSI110083.978Equus_caballus
ENSMZEG00005000340-9689.881ENSELUG00000023219MSI19290.544Esox_lucius
ENSMZEG00005000340-9487.850ENSELUG00000023280-10087.539Esox_lucius
ENSMZEG00005000340-10083.978ENSFCAG00000011007MSI110083.978Felis_catus
ENSMZEG00005000340-9489.333ENSFALG00000007574MSI110089.333Ficedula_albicollis
ENSMZEG00005000340-9484.451ENSFDAG00000019586MSI110084.451Fukomys_damarensis
ENSMZEG00005000340-10092.571ENSFHEG00000003560-10092.571Fundulus_heteroclitus
ENSMZEG00005000340-10098.281ENSFHEG00000022446MSI110098.281Fundulus_heteroclitus
ENSMZEG00005000340-10083.051ENSGMOG00000017838-10083.051Gadus_morhua
ENSMZEG00005000340-10095.977ENSGMOG00000001006MSI19995.977Gadus_morhua
ENSMZEG00005000340-9488.931ENSGALG00000007227MSI19876.613Gallus_gallus
ENSMZEG00005000340-9492.378ENSGAFG00000021522MSI19492.378Gambusia_affinis
ENSMZEG00005000340-10079.819ENSGAFG00000005860-10079.819Gambusia_affinis
ENSMZEG00005000340-10097.708ENSGACG00000012679MSI110097.708Gasterosteus_aculeatus
ENSMZEG00005000340-10084.765ENSGACG00000008674-10084.765Gasterosteus_aculeatus
ENSMZEG00005000340-10088.855ENSGAGG00000016037MSI110088.855Gopherus_agassizii
ENSMZEG00005000340-9485.350ENSGGOG00000010328MSI110085.350Gorilla_gorilla
ENSMZEG00005000340-10092.593ENSHBUG00000021921MSI110092.593Haplochromis_burtoni
ENSMZEG00005000340-100100.000ENSHBUG00000011841-100100.000Haplochromis_burtoni
ENSMZEG00005000340-10083.702ENSHGLG00000012782MSI110083.702Heterocephalus_glaber_female
ENSMZEG00005000340-9484.451ENSHGLG00100016848MSI110084.451Heterocephalus_glaber_male
ENSMZEG00005000340-9491.234ENSHCOG00000012019MSI110091.234Hippocampus_comes
ENSMZEG00005000340-10092.614ENSHCOG00000012067-10092.614Hippocampus_comes
ENSMZEG00005000340-10091.977ENSIPUG00000001976msi19993.000Ictalurus_punctatus
ENSMZEG00005000340-9485.531ENSSTOG00000009799MSI110085.531Ictidomys_tridecemlineatus
ENSMZEG00005000340-10083.978ENSJJAG00000010463Msi110083.978Jaculus_jaculus
ENSMZEG00005000340-10074.561ENSJJAG00000010643-10074.561Jaculus_jaculus
ENSMZEG00005000340-10098.276ENSKMAG00000011251MSI110098.276Kryptolebias_marmoratus
ENSMZEG00005000340-9492.532ENSKMAG00000019877-10092.532Kryptolebias_marmoratus
ENSMZEG00005000340-10098.567ENSLBEG00000008789MSI110098.567Labrus_bergylta
ENSMZEG00005000340-10092.571ENSLBEG00000001375-10092.571Labrus_bergylta
ENSMZEG00005000340-9483.918ENSLACG00000018287MSI110083.918Latimeria_chalumnae
ENSMZEG00005000340-5579.091ENSLOCG00000008618zgc:1107967179.091Lepisosteus_oculatus
ENSMZEG00005000340-9077.049ENSLAFG00000009412MSI110076.721Loxodonta_africana
ENSMZEG00005000340-9485.380ENSMFAG00000001798MSI110085.380Macaca_fascicularis
ENSMZEG00005000340-9485.380ENSMMUG00000031527MSI19784.483Macaca_mulatta
ENSMZEG00005000340-10085.131ENSMNEG00000040034MSI110085.131Macaca_nemestrina
ENSMZEG00005000340-9484.756ENSMLEG00000003921MSI110084.756Mandrillus_leucophaeus
ENSMZEG00005000340-10099.138ENSMAMG00000002279MSI110099.138Mastacembelus_armatus
ENSMZEG00005000340-10092.000ENSMAMG00000018426-10092.000Mastacembelus_armatus
ENSMZEG00005000340-10092.593ENSMZEG00005026892MSI110092.593Maylandia_zebra
ENSMZEG00005000340-6794.083ENSMGAG00000016518-10094.083Meleagris_gallopavo
ENSMZEG00005000340-6891.518ENSMAUG00000016820Msi110089.300Mesocricetus_auratus
ENSMZEG00005000340-10083.978ENSMICG00000033181MSI110083.978Microcebus_murinus
ENSMZEG00005000340-10083.702ENSMOCG00000002286Msi110083.702Microtus_ochrogaster
ENSMZEG00005000340-10087.234ENSMMOG00000012265-10087.234Mola_mola
ENSMZEG00005000340-9491.909ENSMMOG00000010492MSI19691.909Mola_mola
ENSMZEG00005000340-9157.831ENSMODG00000003189-10057.831Monodelphis_domestica
ENSMZEG00005000340-10099.713ENSMALG00000017889MSI110099.713Monopterus_albus
ENSMZEG00005000340-9492.661ENSMALG00000001426-10092.661Monopterus_albus
ENSMZEG00005000340-10083.425MGP_CAROLIEiJ_G0027626Msi19888.593Mus_caroli
ENSMZEG00005000340-10083.425ENSMUSG00000054256Msi19888.593Mus_musculus
ENSMZEG00005000340-10086.286MGP_PahariEiJ_G0024206Msi19888.931Mus_pahari
ENSMZEG00005000340-10083.425MGP_SPRETEiJ_G0028624Msi19888.593Mus_spretus
ENSMZEG00005000340-9485.531ENSMPUG00000003168MSI110085.531Mustela_putorius_furo
ENSMZEG00005000340-9476.190ENSMLUG00000010313MSI110076.190Myotis_lucifugus
ENSMZEG00005000340-9484.802ENSNGAG00000014508Msi19184.802Nannospalax_galili
ENSMZEG00005000340-8984.836ENSNBRG00000018012MSI19984.836Neolamprologus_brichardi
ENSMZEG00005000340-100100.000ENSNBRG00000000841-100100.000Neolamprologus_brichardi
ENSMZEG00005000340-9075.305ENSNLEG00000015636MSI110075.305Nomascus_leucogenys
ENSMZEG00005000340-9464.939ENSMEUG00000015759MSI110064.939Notamacropus_eugenii
ENSMZEG00005000340-9177.778ENSOPRG00000016879MSI110077.778Ochotona_princeps
ENSMZEG00005000340-9484.756ENSODEG00000006328MSI110084.756Octodon_degus
ENSMZEG00005000340-10089.286ENSONIG00000019452-10089.286Oreochromis_niloticus
ENSMZEG00005000340-100100.000ENSONIG00000011182MSI1100100.000Oreochromis_niloticus
ENSMZEG00005000340-9485.531ENSOCUG00000027716MSI110085.531Oryctolagus_cuniculus
ENSMZEG00005000340-10099.140ENSORLG00000019978-10099.140Oryzias_latipes
ENSMZEG00005000340-10091.429ENSORLG00000029593MSI110091.429Oryzias_latipes
ENSMZEG00005000340-10099.140ENSORLG00020001208-7199.140Oryzias_latipes_hni
ENSMZEG00005000340-10091.429ENSORLG00020008266MSI19990.852Oryzias_latipes_hni
ENSMZEG00005000340-10091.429ENSORLG00015003916MSI110091.429Oryzias_latipes_hsok
ENSMZEG00005000340-10099.140ENSORLG00015013672-7699.091Oryzias_latipes_hsok
ENSMZEG00005000340-10099.140ENSOMEG00000017536MSI110099.140Oryzias_melastigma
ENSMZEG00005000340-10091.714ENSOMEG00000002272-10091.714Oryzias_melastigma
ENSMZEG00005000340-9981.868ENSOGAG00000003847MSI19981.868Otolemur_garnettii
ENSMZEG00005000340-9482.121ENSOARG00000012097MSI110082.121Ovis_aries
ENSMZEG00005000340-9484.756ENSPPAG00000043073MSI110084.756Pan_paniscus
ENSMZEG00005000340-10083.978ENSPPRG00000000370MSI110083.978Panthera_pardus
ENSMZEG00005000340-9485.531ENSPTIG00000008913MSI110085.531Panthera_tigris_altaica
ENSMZEG00005000340-10083.978ENSPTRG00000005531MSI110083.978Pan_troglodytes
ENSMZEG00005000340-10083.702ENSPANG00000006335MSI110083.702Papio_anubis
ENSMZEG00005000340-10093.678ENSPKIG00000023575-10093.678Paramormyrops_kingsleyae
ENSMZEG00005000340-10093.921ENSPKIG00000016497MSI110093.921Paramormyrops_kingsleyae
ENSMZEG00005000340-9485.976ENSPSIG00000011608-9385.976Pelodiscus_sinensis
ENSMZEG00005000340-5185.965ENSPSIG00000016295-9584.615Pelodiscus_sinensis
ENSMZEG00005000340-7981.140ENSPSIG00000009621-10081.140Pelodiscus_sinensis
ENSMZEG00005000340-9099.324ENSPMGG00000000514MSI19799.324Periophthalmus_magnuspinnatus
ENSMZEG00005000340-9474.545ENSPMGG00000007743-9868.768Periophthalmus_magnuspinnatus
ENSMZEG00005000340-9483.383ENSPEMG00000010491Msi19583.383Peromyscus_maniculatus_bairdii
ENSMZEG00005000340-10098.854ENSPFOG00000013113MSI110098.854Poecilia_formosa
ENSMZEG00005000340-10092.000ENSPFOG00000008319-8692.000Poecilia_formosa
ENSMZEG00005000340-10098.854ENSPLAG00000014025-10098.854Poecilia_latipinna
ENSMZEG00005000340-10092.000ENSPLAG00000012431-9792.000Poecilia_latipinna
ENSMZEG00005000340-10098.854ENSPMEG00000012796MSI110098.854Poecilia_mexicana
ENSMZEG00005000340-10091.429ENSPMEG00000007025-9386.306Poecilia_mexicana
ENSMZEG00005000340-9590.096ENSPREG00000021416-9590.096Poecilia_reticulata
ENSMZEG00005000340-7594.554ENSPREG00000014574-10094.554Poecilia_reticulata
ENSMZEG00005000340-10083.149ENSPPYG00000005027MSI110083.149Pongo_abelii
ENSMZEG00005000340-7689.848ENSPCAG00000002300MSI17289.848Procavia_capensis
ENSMZEG00005000340-10083.978ENSPCOG00000017341MSI110083.978Propithecus_coquereli
ENSMZEG00005000340-9469.207ENSPVAG00000002225MSI110069.207Pteropus_vampyrus
ENSMZEG00005000340-10092.593ENSPNYG00000004379MSI110092.593Pundamilia_nyererei
ENSMZEG00005000340-100100.000ENSPNYG00000002529-100100.000Pundamilia_nyererei
ENSMZEG00005000340-10093.123ENSPNAG00000019337msi110093.123Pygocentrus_nattereri
ENSMZEG00005000340-9485.209ENSRNOG00000001156Msi110085.209Rattus_norvegicus
ENSMZEG00005000340-9485.531ENSRBIG00000036889MSI110085.531Rhinopithecus_bieti
ENSMZEG00005000340-9484.545ENSRROG00000041076MSI19384.545Rhinopithecus_roxellana
ENSMZEG00005000340-9485.380ENSSBOG00000030259MSI19985.380Saimiri_boliviensis_boliviensis
ENSMZEG00005000340-9475.490ENSSHAG00000006834MSI110075.490Sarcophilus_harrisii
ENSMZEG00005000340-9494.498ENSSFOG00015005350MSI110094.498Scleropages_formosus
ENSMZEG00005000340-9494.817ENSSFOG00015014964-9594.817Scleropages_formosus
ENSMZEG00005000340-9493.103ENSSMAG00000009156-7391.584Scophthalmus_maximus
ENSMZEG00005000340-10091.212ENSSMAG00000018824MSI110091.212Scophthalmus_maximus
ENSMZEG00005000340-10099.427ENSSDUG00000001027MSI110099.427Seriola_dumerili
ENSMZEG00005000340-10092.857ENSSDUG00000022697-10092.857Seriola_dumerili
ENSMZEG00005000340-10099.427ENSSLDG00000016832MSI110099.427Seriola_lalandi_dorsalis
ENSMZEG00005000340-10083.965ENSSLDG00000018706-10083.965Seriola_lalandi_dorsalis
ENSMZEG00005000340-10087.179ENSSPUG00000015741MSI110087.179Sphenodon_punctatus
ENSMZEG00005000340-9493.548ENSSPAG00000013098-10093.293Stegastes_partitus
ENSMZEG00005000340-5785.000ENSSPAG00000015573zgc:1107968285.000Stegastes_partitus
ENSMZEG00005000340-7589.005ENSSPAG00000014085-10089.005Stegastes_partitus
ENSMZEG00005000340-10084.840ENSSSCG00000029365MSI110085.209Sus_scrofa
ENSMZEG00005000340-9486.471ENSTGUG00000009534MSI110086.471Taeniopygia_guttata
ENSMZEG00005000340-9486.149ENSTRUG00000015636-7986.149Takifugu_rubripes
ENSMZEG00005000340-5391.753ENSTRUG00000021586-9991.753Takifugu_rubripes
ENSMZEG00005000340-8987.747ENSTRUG00000016249MSI110087.747Takifugu_rubripes
ENSMZEG00005000340-10094.302ENSTNIG00000011469MSI110094.302Tetraodon_nigroviridis
ENSMZEG00005000340-9966.163ENSTNIG00000019814-9966.163Tetraodon_nigroviridis
ENSMZEG00005000340-9475.458ENSTBEG00000007182MSI110075.458Tupaia_belangeri
ENSMZEG00005000340-7689.098ENSTTRG00000005663MSI17889.098Tursiops_truncatus
ENSMZEG00005000340-7585.714ENSUAMG00000015514MSI19487.963Ursus_americanus
ENSMZEG00005000340-9482.886ENSUMAG00000006176MSI18882.886Ursus_maritimus
ENSMZEG00005000340-9484.802ENSVVUG00000020993MSI110084.084Vulpes_vulpes
ENSMZEG00005000340-10086.207ENSXETG00000012216msi110086.207Xenopus_tropicalis
ENSMZEG00005000340-9479.935ENSXCOG00000017605MSI18979.935Xiphophorus_couchianus
ENSMZEG00005000340-10091.714ENSXMAG00000018237-10091.714Xiphophorus_maculatus
ENSMZEG00005000340-10098.851ENSXMAG00000027103MSI110090.774Xiphophorus_maculatus

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