EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005000414 (Gene tree)
Gene ID: 101471175
Gene Symbol: mtrex
Alias: julie|mtrex|skiv2l2|wu:fd11a05|zgc:63838
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 16951 bases
Position: chrLG7:47773011-47789961
Accession: 101471175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005000541	rRNA_proc-arch	PF13234.6	2.2e-87	1	1
ENSMZEP00005000560	rRNA_proc-arch	PF13234.6	1.6e-84	1	1
ENSMZEP00005000560	DEAD	PF00270.29	8.4e-17	1	1
ENSMZEP00005000541	DEAD	PF00270.29	8.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005000606	-	4490	XM_004549721	ENSMZEP00005000541	1037 (aa)	XP_004549778	UPI00032A006F
ENSMZET00005000629	-	3012	-	ENSMZEP00005000560	1003 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005000414's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005000414's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005000414	mtrex	100	82.459	ENSG00000039123	MTREX	100	82.459	Homo_sapiens
ENSMZEG00005000414	mtrex	100	94.407	ENSAPOG00000007814	mtrex	100	94.407	Acanthochromis_polyacanthus
ENSMZEG00005000414	mtrex	100	82.683	ENSAMEG00000013856	MTREX	100	82.588	Ailuropoda_melanoleuca
ENSMZEG00005000414	mtrex	100	92.189	ENSACIG00000015117	mtrex	100	92.189	Amphilophus_citrinellus
ENSMZEG00005000414	mtrex	100	94.600	ENSAOCG00000011884	mtrex	100	94.600	Amphiprion_ocellaris
ENSMZEG00005000414	mtrex	100	94.407	ENSAPEG00000019384	mtrex	100	94.407	Amphiprion_percula
ENSMZEG00005000414	mtrex	100	94.793	ENSATEG00000015117	mtrex	100	94.889	Anabas_testudineus
ENSMZEG00005000414	mtrex	94	86.006	ENSAPLG00000009694	MTREX	98	85.904	Anas_platyrhynchos
ENSMZEG00005000414	mtrex	100	83.158	ENSACAG00000015200	MTREX	96	83.062	Anolis_carolinensis
ENSMZEG00005000414	mtrex	100	82.920	ENSANAG00000023095	MTREX	100	82.824	Aotus_nancymaae
ENSMZEG00005000414	mtrex	100	100.000	ENSACLG00000001921	mtrex	100	100.000	Astatotilapia_calliptera
ENSMZEG00005000414	mtrex	95	86.930	ENSAMXG00000018751	mtrex	99	87.348	Astyanax_mexicanus
ENSMZEG00005000414	mtrex	100	82.650	ENSBTAG00000010518	MTREX	100	82.555	Bos_taurus
ENSMZEG00005000414	mtrex	91	53.715	WBGene00012342	mtr-4	91	53.575	Caenorhabditis_elegans
ENSMZEG00005000414	mtrex	100	82.068	ENSCJAG00000001773	MTREX	100	82.068	Callithrix_jacchus
ENSMZEG00005000414	mtrex	100	82.729	ENSCAFG00000006818	MTREX	100	82.667	Canis_familiaris
ENSMZEG00005000414	mtrex	100	82.729	ENSCAFG00020024352	MTREX	100	82.667	Canis_lupus_dingo
ENSMZEG00005000414	mtrex	100	82.588	ENSCHIG00000024413	MTREX	100	82.493	Capra_hircus
ENSMZEG00005000414	mtrex	93	83.842	ENSTSYG00000007389	MTREX	100	83.842	Carlito_syrichta
ENSMZEG00005000414	mtrex	86	75.571	ENSCAPG00000008696	MTREX	95	75.342	Cavia_aperea
ENSMZEG00005000414	mtrex	100	82.650	ENSCPOG00000009797	MTREX	100	82.667	Cavia_porcellus
ENSMZEG00005000414	mtrex	100	82.824	ENSCCAG00000014177	MTREX	100	82.650	Cebus_capucinus
ENSMZEG00005000414	mtrex	100	82.650	ENSCATG00000042153	MTREX	100	82.555	Cercocebus_atys
ENSMZEG00005000414	mtrex	100	82.729	ENSCLAG00000006622	MTREX	100	82.667	Chinchilla_lanigera
ENSMZEG00005000414	mtrex	100	78.992	ENSCSAG00000016445	MTREX	100	78.897	Chlorocebus_sabaeus
ENSMZEG00005000414	mtrex	61	97.222	ENSCHOG00000010936	-	62	97.222	Choloepus_hoffmanni
ENSMZEG00005000414	mtrex	100	83.766	ENSCPBG00000026551	MTREX	94	83.670	Chrysemys_picta_bellii
ENSMZEG00005000414	mtrex	99	65.230	ENSCING00000003239	-	99	65.421	Ciona_intestinalis
ENSMZEG00005000414	mtrex	99	64.265	ENSCSAVG00000009304	-	99	69.173	Ciona_savignyi
ENSMZEG00005000414	mtrex	100	82.920	ENSCANG00000035770	MTREX	100	82.824	Colobus_angolensis_palliatus
ENSMZEG00005000414	mtrex	100	82.841	ENSCGRG00001024680	Mtrex	100	82.745	Cricetulus_griseus_chok1gshd
ENSMZEG00005000414	mtrex	100	82.841	ENSCGRG00000000307	Mtrex	100	82.745	Cricetulus_griseus_crigri
ENSMZEG00005000414	mtrex	100	93.153	ENSCSEG00000018621	mtrex	98	93.443	Cynoglossus_semilaevis
ENSMZEG00005000414	mtrex	100	93.443	ENSCVAG00000004556	mtrex	100	93.443	Cyprinodon_variegatus
ENSMZEG00005000414	mtrex	100	87.271	ENSDARG00000013457	mtrex	100	87.175	Danio_rerio
ENSMZEG00005000414	mtrex	100	82.795	ENSDNOG00000015375	MTREX	100	82.700	Dasypus_novemcinctus
ENSMZEG00005000414	mtrex	100	83.015	ENSDORG00000006782	Mtrex	100	83.048	Dipodomys_ordii
ENSMZEG00005000414	mtrex	98	62.732	FBgn0001986	Mtr4	96	62.293	Drosophila_melanogaster
ENSMZEG00005000414	mtrex	90	66.977	ENSETEG00000000727	MTREX	90	66.977	Echinops_telfairi
ENSMZEG00005000414	mtrex	99	73.436	ENSEBUG00000012869	mtrex	99	73.340	Eptatretus_burgeri
ENSMZEG00005000414	mtrex	100	82.650	ENSEASG00005013270	MTREX	100	82.745	Equus_asinus_asinus
ENSMZEG00005000414	mtrex	100	82.745	ENSECAG00000023723	MTREX	100	88.837	Equus_caballus
ENSMZEG00005000414	mtrex	93	84.884	ENSEEUG00000000527	MTREX	94	84.615	Erinaceus_europaeus
ENSMZEG00005000414	mtrex	98	87.781	ENSELUG00000004898	mtrex	100	91.501	Esox_lucius
ENSMZEG00005000414	mtrex	100	82.952	ENSFCAG00000010575	MTREX	100	82.857	Felis_catus
ENSMZEG00005000414	mtrex	100	82.359	ENSFALG00000010850	MTREX	100	82.359	Ficedula_albicollis
ENSMZEG00005000414	mtrex	100	82.314	ENSFDAG00000011199	MTREX	100	82.218	Fukomys_damarensis
ENSMZEG00005000414	mtrex	100	93.635	ENSFHEG00000023014	mtrex	100	90.664	Fundulus_heteroclitus
ENSMZEG00005000414	mtrex	100	86.044	ENSGMOG00000014702	mtrex	100	86.071	Gadus_morhua
ENSMZEG00005000414	mtrex	100	82.852	ENSGALG00000014709	MTREX	86	82.755	Gallus_gallus
ENSMZEG00005000414	mtrex	100	93.539	ENSGAFG00000012425	mtrex	100	93.539	Gambusia_affinis
ENSMZEG00005000414	mtrex	100	86.711	ENSGACG00000016260	mtrex	99	91.739	Gasterosteus_aculeatus
ENSMZEG00005000414	mtrex	100	83.285	ENSGAGG00000020036	MTREX	100	83.189	Gopherus_agassizii
ENSMZEG00005000414	mtrex	100	82.459	ENSGGOG00000001867	MTREX	100	82.459	Gorilla_gorilla
ENSMZEG00005000414	mtrex	100	100.000	ENSHBUG00000006229	mtrex	100	100.000	Haplochromis_burtoni
ENSMZEG00005000414	mtrex	100	82.555	ENSHGLG00000019445	SKIV2L2	100	82.600	Heterocephalus_glaber_female
ENSMZEG00005000414	mtrex	100	82.555	ENSHGLG00100011833	SKIV2L2	100	82.600	Heterocephalus_glaber_male
ENSMZEG00005000414	mtrex	92	90.520	ENSHCOG00000019995	mtrex	100	90.520	Hippocampus_comes
ENSMZEG00005000414	mtrex	100	85.645	ENSIPUG00000024348	skiv2l2	100	85.948	Ictalurus_punctatus
ENSMZEG00005000414	mtrex	100	82.476	ENSSTOG00000010802	MTREX	100	82.476	Ictidomys_tridecemlineatus
ENSMZEG00005000414	mtrex	100	78.482	ENSJJAG00000020975	Mtrex	100	78.290	Jaculus_jaculus
ENSMZEG00005000414	mtrex	100	93.828	ENSKMAG00000012642	mtrex	100	93.828	Kryptolebias_marmoratus
ENSMZEG00005000414	mtrex	100	94.118	ENSLBEG00000019367	mtrex	100	94.118	Labrus_bergylta
ENSMZEG00005000414	mtrex	100	84.630	ENSLACG00000009075	MTREX	100	84.630	Latimeria_chalumnae
ENSMZEG00005000414	mtrex	100	86.551	ENSLOCG00000010186	mtrex	100	86.551	Lepisosteus_oculatus
ENSMZEG00005000414	mtrex	99	80.802	ENSLAFG00000010497	MTREX	100	80.648	Loxodonta_africana
ENSMZEG00005000414	mtrex	100	82.650	ENSMFAG00000031610	MTREX	100	82.555	Macaca_fascicularis
ENSMZEG00005000414	mtrex	100	82.857	ENSMMUG00000010379	MTREX	100	82.762	Macaca_mulatta
ENSMZEG00005000414	mtrex	100	82.650	ENSMNEG00000032746	MTREX	100	82.555	Macaca_nemestrina
ENSMZEG00005000414	mtrex	100	82.650	ENSMLEG00000041051	MTREX	100	82.555	Mandrillus_leucophaeus
ENSMZEG00005000414	mtrex	100	91.707	ENSMAMG00000016753	mtrex	98	95.491	Mastacembelus_armatus
ENSMZEG00005000414	mtrex	95	61.972	ENSMGAG00000003980	MTREX	99	61.670	Meleagris_gallopavo
ENSMZEG00005000414	mtrex	100	82.841	ENSMAUG00000010727	Mtrex	100	82.745	Mesocricetus_auratus
ENSMZEG00005000414	mtrex	100	82.936	ENSMICG00000012779	MTREX	100	83.015	Microcebus_murinus
ENSMZEG00005000414	mtrex	100	82.571	ENSMOCG00000019886	Mtrex	100	82.476	Microtus_ochrogaster
ENSMZEG00005000414	mtrex	100	90.270	ENSMMOG00000002476	mtrex	100	90.270	Mola_mola
ENSMZEG00005000414	mtrex	100	83.381	ENSMODG00000019494	MTREX	100	83.285	Monodelphis_domestica
ENSMZEG00005000414	mtrex	100	82.177	ENSMALG00000002917	mtrex	98	90.041	Monopterus_albus
ENSMZEG00005000414	mtrex	100	82.600	MGP_CAROLIEiJ_G0018896	Mtrex	100	82.600	Mus_caroli
ENSMZEG00005000414	mtrex	100	82.218	ENSMUSG00000016018	Mtrex	100	82.330	Mus_musculus
ENSMZEG00005000414	mtrex	100	82.218	MGP_PahariEiJ_G0015967	Mtrex	100	82.330	Mus_pahari
ENSMZEG00005000414	mtrex	100	82.218	MGP_SPRETEiJ_G0019775	Mtrex	100	82.330	Mus_spretus
ENSMZEG00005000414	mtrex	100	82.729	ENSMPUG00000007619	MTREX	100	82.762	Mustela_putorius_furo
ENSMZEG00005000414	mtrex	100	82.095	ENSMLUG00000001152	MTREX	100	82.095	Myotis_lucifugus
ENSMZEG00005000414	mtrex	100	82.920	ENSNGAG00000011938	Mtrex	100	82.824	Nannospalax_galili
ENSMZEG00005000414	mtrex	100	99.807	ENSNBRG00000011293	mtrex	100	99.807	Neolamprologus_brichardi
ENSMZEG00005000414	mtrex	100	78.857	ENSNLEG00000001494	MTREX	100	78.402	Nomascus_leucogenys
ENSMZEG00005000414	mtrex	83	94.118	ENSMEUG00000006496	-	83	94.118	Notamacropus_eugenii
ENSMZEG00005000414	mtrex	100	69.761	ENSOPRG00000008009	MTREX	100	69.885	Ochotona_princeps
ENSMZEG00005000414	mtrex	100	82.156	ENSODEG00000017234	MTREX	100	82.190	Octodon_degus
ENSMZEG00005000414	mtrex	100	99.229	ENSONIG00000007587	mtrex	100	99.229	Oreochromis_niloticus
ENSMZEG00005000414	mtrex	50	82.785	ENSOANG00000004885	-	99	82.592	Ornithorhynchus_anatinus
ENSMZEG00005000414	mtrex	100	83.174	ENSOCUG00000004463	MTREX	100	83.078	Oryctolagus_cuniculus
ENSMZEG00005000414	mtrex	100	92.478	ENSORLG00000005443	mtrex	100	92.575	Oryzias_latipes
ENSMZEG00005000414	mtrex	100	92.478	ENSORLG00020006329	mtrex	100	92.575	Oryzias_latipes_hni
ENSMZEG00005000414	mtrex	100	92.382	ENSORLG00015012924	mtrex	100	92.478	Oryzias_latipes_hsok
ENSMZEG00005000414	mtrex	100	92.878	ENSOMEG00000008825	mtrex	100	92.589	Oryzias_melastigma
ENSMZEG00005000414	mtrex	100	82.920	ENSOGAG00000002886	MTREX	100	82.634	Otolemur_garnettii
ENSMZEG00005000414	mtrex	100	82.353	ENSOARG00000007764	MTREX	100	82.258	Ovis_aries
ENSMZEG00005000414	mtrex	100	82.634	ENSPPAG00000039291	MTREX	100	82.459	Pan_paniscus
ENSMZEG00005000414	mtrex	100	82.952	ENSPPRG00000019701	MTREX	100	82.857	Panthera_pardus
ENSMZEG00005000414	mtrex	100	81.524	ENSPTIG00000009313	MTREX	100	81.429	Panthera_tigris_altaica
ENSMZEG00005000414	mtrex	100	82.634	ENSPTRG00000016878	MTREX	100	82.459	Pan_troglodytes
ENSMZEG00005000414	mtrex	100	82.555	ENSPANG00000009697	MTREX	100	82.459	Papio_anubis
ENSMZEG00005000414	mtrex	100	85.509	ENSPKIG00000020833	mtrex	100	85.413	Paramormyrops_kingsleyae
ENSMZEG00005000414	mtrex	100	82.464	ENSPSIG00000012150	MTREX	100	83.766	Pelodiscus_sinensis
ENSMZEG00005000414	mtrex	100	89.595	ENSPMGG00000002582	mtrex	100	89.595	Periophthalmus_magnuspinnatus
ENSMZEG00005000414	mtrex	95	64.955	ENSPMAG00000009668	mtrex	100	64.889	Petromyzon_marinus
ENSMZEG00005000414	mtrex	93	86.378	ENSPCIG00000024730	MTREX	100	87.198	Phascolarctos_cinereus
ENSMZEG00005000414	mtrex	76	94.797	ENSPFOG00000003141	mtrex	100	94.797	Poecilia_formosa
ENSMZEG00005000414	mtrex	100	93.443	ENSPLAG00000021311	mtrex	100	93.443	Poecilia_latipinna
ENSMZEG00005000414	mtrex	93	95.016	ENSPMEG00000010597	mtrex	99	95.016	Poecilia_mexicana
ENSMZEG00005000414	mtrex	100	93.346	ENSPREG00000003089	mtrex	100	93.346	Poecilia_reticulata
ENSMZEG00005000414	mtrex	98	82.171	ENSPPYG00000015469	MTREX	98	82.171	Pongo_abelii
ENSMZEG00005000414	mtrex	94	73.023	ENSPCAG00000013120	MTREX	94	73.023	Procavia_capensis
ENSMZEG00005000414	mtrex	99	77.382	ENSPCOG00000018092	MTREX	100	77.277	Propithecus_coquereli
ENSMZEG00005000414	mtrex	100	82.841	ENSPVAG00000002445	MTREX	100	82.762	Pteropus_vampyrus
ENSMZEG00005000414	mtrex	100	99.904	ENSPNYG00000006164	mtrex	100	99.904	Pundamilia_nyererei
ENSMZEG00005000414	mtrex	100	87.584	ENSPNAG00000008794	mtrex	100	87.680	Pygocentrus_nattereri
ENSMZEG00005000414	mtrex	99	82.222	ENSRNOG00000010125	Mtrex	97	81.705	Rattus_norvegicus
ENSMZEG00005000414	mtrex	100	81.107	ENSRBIG00000034930	MTREX	100	81.011	Rhinopithecus_bieti
ENSMZEG00005000414	mtrex	100	82.729	ENSRROG00000039895	MTREX	100	82.634	Rhinopithecus_roxellana
ENSMZEG00005000414	mtrex	91	54.822	YJL050W	MTR4	95	52.440	Saccharomyces_cerevisiae
ENSMZEG00005000414	mtrex	100	82.920	ENSSBOG00000026693	MTREX	100	83.048	Saimiri_boliviensis_boliviensis
ENSMZEG00005000414	mtrex	95	85.598	ENSSHAG00000004600	MTREX	98	85.497	Sarcophilus_harrisii
ENSMZEG00005000414	mtrex	100	86.647	ENSSFOG00015014355	skiv2l2	100	86.647	Scleropages_formosus
ENSMZEG00005000414	mtrex	100	93.925	ENSSMAG00000007572	mtrex	100	93.925	Scophthalmus_maximus
ENSMZEG00005000414	mtrex	100	95.371	ENSSDUG00000023789	mtrex	100	95.371	Seriola_dumerili
ENSMZEG00005000414	mtrex	100	95.468	ENSSLDG00000006301	mtrex	100	95.468	Seriola_lalandi_dorsalis
ENSMZEG00005000414	mtrex	93	86.540	ENSSARG00000008387	MTREX	100	81.429	Sorex_araneus
ENSMZEG00005000414	mtrex	90	84.743	ENSSPUG00000007071	MTREX	96	85.738	Sphenodon_punctatus
ENSMZEG00005000414	mtrex	100	91.070	ENSSPAG00000011319	mtrex	100	91.168	Stegastes_partitus
ENSMZEG00005000414	mtrex	100	82.778	ENSSSCG00000016911	MTREX	100	82.683	Sus_scrofa
ENSMZEG00005000414	mtrex	100	82.133	ENSTGUG00000002480	MTREX	100	82.037	Taeniopygia_guttata
ENSMZEG00005000414	mtrex	100	91.514	ENSTRUG00000014571	mtrex	100	91.514	Takifugu_rubripes
ENSMZEG00005000414	mtrex	100	68.065	ENSTBEG00000007769	MTREX	100	68.130	Tupaia_belangeri
ENSMZEG00005000414	mtrex	100	82.792	ENSTTRG00000008678	MTREX	100	82.696	Tursiops_truncatus
ENSMZEG00005000414	mtrex	100	82.538	ENSUAMG00000023061	MTREX	100	82.667	Ursus_americanus
ENSMZEG00005000414	mtrex	100	82.805	ENSUMAG00000009373	MTREX	99	87.785	Ursus_maritimus
ENSMZEG00005000414	mtrex	100	73.764	ENSVPAG00000011174	MTREX	100	73.384	Vicugna_pacos
ENSMZEG00005000414	mtrex	100	82.824	ENSVVUG00000021337	MTREX	100	82.762	Vulpes_vulpes
ENSMZEG00005000414	mtrex	100	84.697	ENSXETG00000032798	MTREX	100	84.601	Xenopus_tropicalis
ENSMZEG00005000414	mtrex	100	93.925	ENSXMAG00000004799	mtrex	100	93.925	Xiphophorus_maculatus