EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005000415 (Gene tree)
Gene ID: 101478941
Gene Symbol: PRDM12
Alias: zgc:101606
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 5610 bases
Position: chrLG12:33347882-33353491
Accession: 101478941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005000454	zf-C2H2	PF00096.26	4.7e-12	1	2
ENSMZEP00005000454	zf-C2H2	PF00096.26	4.7e-12	2	2
ENSMZEP00005000454	zf-met	PF12874.7	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005000515	PRDM12-201	1188	XM_004571612	ENSMZEP00005000454	395 (aa)	XP_004571669	UPI000329AB76

Gene Model

Click here to download ENSMZEG00005000415's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005000415's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005000415	PRDM12	86	80.994	ENSG00000130711	PRDM12	88	80.994	Homo_sapiens
ENSMZEG00005000415	PRDM12	100	76.904	ENSAPOG00000016051	prdm12b	100	76.658	Acanthochromis_polyacanthus
ENSMZEG00005000415	PRDM12	100	69.077	ENSAPOG00000018234	-	100	69.077	Acanthochromis_polyacanthus
ENSMZEG00005000415	PRDM12	86	78.886	ENSAMEG00000016234	PRDM12	99	78.886	Ailuropoda_melanoleuca
ENSMZEG00005000415	PRDM12	100	88.750	ENSACIG00000005193	-	100	88.000	Amphilophus_citrinellus
ENSMZEG00005000415	PRDM12	100	77.475	ENSACIG00000019578	prdm12b	100	77.037	Amphilophus_citrinellus
ENSMZEG00005000415	PRDM12	100	77.419	ENSAOCG00000015040	prdm12b	100	77.171	Amphiprion_ocellaris
ENSMZEG00005000415	PRDM12	100	83.544	ENSAPEG00000022849	-	99	83.291	Amphiprion_percula
ENSMZEG00005000415	PRDM12	100	78.000	ENSAPEG00000015092	prdm12b	100	77.750	Amphiprion_percula
ENSMZEG00005000415	PRDM12	100	86.946	ENSATEG00000014595	-	100	86.946	Anabas_testudineus
ENSMZEG00005000415	PRDM12	86	80.994	ENSANAG00000020616	PRDM12	95	80.994	Aotus_nancymaae
ENSMZEG00005000415	PRDM12	100	99.494	ENSACLG00000007631	-	100	99.494	Astatotilapia_calliptera
ENSMZEG00005000415	PRDM12	100	75.758	ENSACLG00000011876	prdm12b	100	74.747	Astatotilapia_calliptera
ENSMZEG00005000415	PRDM12	100	78.788	ENSAMXG00000033665	prdm12b	100	78.535	Astyanax_mexicanus
ENSMZEG00005000415	PRDM12	100	74.747	ENSAMXG00000008540	PRDM12	100	72.980	Astyanax_mexicanus
ENSMZEG00005000415	PRDM12	86	81.871	ENSBTAG00000023797	PRDM12	90	81.871	Bos_taurus
ENSMZEG00005000415	PRDM12	86	80.994	ENSCJAG00000020540	PRDM12	90	80.994	Callithrix_jacchus
ENSMZEG00005000415	PRDM12	76	82.333	ENSCAFG00000023076	PRDM12	85	85.512	Canis_familiaris
ENSMZEG00005000415	PRDM12	86	81.579	ENSCAFG00020024046	PRDM12	89	81.579	Canis_lupus_dingo
ENSMZEG00005000415	PRDM12	86	81.579	ENSCHIG00000025005	PRDM12	90	81.579	Capra_hircus
ENSMZEG00005000415	PRDM12	88	77.714	ENSCPOG00000005901	PRDM12	95	80.909	Cavia_porcellus
ENSMZEG00005000415	PRDM12	86	80.994	ENSCCAG00000037485	PRDM12	89	80.994	Cebus_capucinus
ENSMZEG00005000415	PRDM12	86	80.994	ENSCATG00000020327	PRDM12	89	80.994	Cercocebus_atys
ENSMZEG00005000415	PRDM12	88	79.943	ENSCLAG00000005499	PRDM12	91	79.943	Chinchilla_lanigera
ENSMZEG00005000415	PRDM12	86	80.994	ENSCSAG00000014756	PRDM12	89	80.994	Chlorocebus_sabaeus
ENSMZEG00005000415	PRDM12	100	75.758	ENSCPBG00000022628	PRDM12	99	75.000	Chrysemys_picta_bellii
ENSMZEG00005000415	PRDM12	86	81.871	ENSCGRG00001015005	Prdm12	89	81.871	Cricetulus_griseus_chok1gshd
ENSMZEG00005000415	PRDM12	100	75.628	ENSCVAG00000017166	prdm12b	100	76.190	Cyprinodon_variegatus
ENSMZEG00005000415	PRDM12	100	82.716	ENSCVAG00000000944	-	100	82.222	Cyprinodon_variegatus
ENSMZEG00005000415	PRDM12	100	79.545	ENSDARG00000007430	prdm12b	100	78.030	Danio_rerio
ENSMZEG00005000415	PRDM12	86	81.341	ENSDNOG00000042302	PRDM12	90	81.341	Dasypus_novemcinctus
ENSMZEG00005000415	PRDM12	94	58.734	ENSEBUG00000016780	prdm12b	75	63.714	Eptatretus_burgeri
ENSMZEG00005000415	PRDM12	88	80.229	ENSEASG00005008472	PRDM12	99	73.485	Equus_asinus_asinus
ENSMZEG00005000415	PRDM12	88	80.229	ENSECAG00000005933	PRDM12	99	73.485	Equus_caballus
ENSMZEG00005000415	PRDM12	100	72.292	ENSELUG00000013674	PRDM12	100	72.346	Esox_lucius
ENSMZEG00005000415	PRDM12	100	79.747	ENSELUG00000009905	prdm12b	100	77.468	Esox_lucius
ENSMZEG00005000415	PRDM12	86	81.579	ENSFCAG00000043086	PRDM12	89	81.579	Felis_catus
ENSMZEG00005000415	PRDM12	100	77.020	ENSFALG00000001445	PRDM12	89	75.505	Ficedula_albicollis
ENSMZEG00005000415	PRDM12	100	85.536	ENSFHEG00000007746	-	100	84.788	Fundulus_heteroclitus
ENSMZEG00005000415	PRDM12	100	75.377	ENSFHEG00000003944	prdm12b	100	75.622	Fundulus_heteroclitus
ENSMZEG00005000415	PRDM12	100	77.273	ENSGMOG00000011797	prdm12b	100	77.020	Gadus_morhua
ENSMZEG00005000415	PRDM12	100	77.020	ENSGALG00000003895	PRDM12	99	75.505	Gallus_gallus
ENSMZEG00005000415	PRDM12	100	76.633	ENSGAFG00000010827	prdm12b	99	76.942	Gambusia_affinis
ENSMZEG00005000415	PRDM12	100	77.193	ENSGACG00000016713	prdm12b	99	76.190	Gasterosteus_aculeatus
ENSMZEG00005000415	PRDM12	100	75.758	ENSGAGG00000014083	PRDM12	99	75.000	Gopherus_agassizii
ENSMZEG00005000415	PRDM12	86	80.702	ENSGGOG00000010568	PRDM12	89	80.702	Gorilla_gorilla
ENSMZEG00005000415	PRDM12	100	99.494	ENSHBUG00000022537	-	93	99.494	Haplochromis_burtoni
ENSMZEG00005000415	PRDM12	100	77.057	ENSHBUG00000022878	prdm12b	100	76.309	Haplochromis_burtoni
ENSMZEG00005000415	PRDM12	88	80.229	ENSHGLG00000013939	PRDM12	91	80.516	Heterocephalus_glaber_female
ENSMZEG00005000415	PRDM12	100	73.383	ENSHCOG00000021167	-	100	70.896	Hippocampus_comes
ENSMZEG00005000415	PRDM12	86	79.830	ENSHCOG00000003663	prdm12b	100	71.921	Hippocampus_comes
ENSMZEG00005000415	PRDM12	100	72.475	ENSIPUG00000019544	PRDM12	100	72.475	Ictalurus_punctatus
ENSMZEG00005000415	PRDM12	100	79.545	ENSIPUG00000017053	prdm12b	100	78.535	Ictalurus_punctatus
ENSMZEG00005000415	PRDM12	86	81.579	ENSSTOG00000005986	PRDM12	85	81.579	Ictidomys_tridecemlineatus
ENSMZEG00005000415	PRDM12	86	81.579	ENSJJAG00000005424	Prdm12	98	81.579	Jaculus_jaculus
ENSMZEG00005000415	PRDM12	95	83.245	ENSKMAG00000021205	-	95	81.937	Kryptolebias_marmoratus
ENSMZEG00005000415	PRDM12	100	72.422	ENSKMAG00000016921	prdm12b	100	72.182	Kryptolebias_marmoratus
ENSMZEG00005000415	PRDM12	100	78.250	ENSLBEG00000017769	prdm12b	100	77.500	Labrus_bergylta
ENSMZEG00005000415	PRDM12	100	87.561	ENSLBEG00000007776	-	100	87.561	Labrus_bergylta
ENSMZEG00005000415	PRDM12	100	75.758	ENSLACG00000017560	PRDM12	99	74.747	Latimeria_chalumnae
ENSMZEG00005000415	PRDM12	100	78.535	ENSLOCG00000005429	prdm12b	99	77.778	Lepisosteus_oculatus
ENSMZEG00005000415	PRDM12	86	79.827	ENSLAFG00000006979	PRDM12	88	79.827	Loxodonta_africana
ENSMZEG00005000415	PRDM12	86	80.994	ENSMFAG00000040322	PRDM12	88	80.994	Macaca_fascicularis
ENSMZEG00005000415	PRDM12	86	80.994	ENSMNEG00000037234	PRDM12	89	80.994	Macaca_nemestrina
ENSMZEG00005000415	PRDM12	100	76.179	ENSMAMG00000013212	prdm12b	100	75.931	Mastacembelus_armatus
ENSMZEG00005000415	PRDM12	100	87.437	ENSMAMG00000018988	-	100	88.191	Mastacembelus_armatus
ENSMZEG00005000415	PRDM12	98	76.667	ENSMGAG00000005438	PRDM12	98	75.128	Meleagris_gallopavo
ENSMZEG00005000415	PRDM12	100	73.500	ENSMAUG00000013040	Prdm12	89	81.871	Mesocricetus_auratus
ENSMZEG00005000415	PRDM12	86	81.579	ENSMICG00000015480	PRDM12	90	81.579	Microcebus_murinus
ENSMZEG00005000415	PRDM12	86	82.164	ENSMOCG00000021026	Prdm12	89	82.164	Microtus_ochrogaster
ENSMZEG00005000415	PRDM12	100	75.315	ENSMODG00000012108	PRDM12	99	73.804	Monodelphis_domestica
ENSMZEG00005000415	PRDM12	85	75.964	ENSMALG00000021901	prdm12b	96	75.227	Monopterus_albus
ENSMZEG00005000415	PRDM12	86	81.871	MGP_CAROLIEiJ_G0023414	Prdm12	99	73.737	Mus_caroli
ENSMZEG00005000415	PRDM12	86	81.871	ENSMUSG00000079466	Prdm12	99	73.737	Mus_musculus
ENSMZEG00005000415	PRDM12	86	81.871	MGP_PahariEiJ_G0024871	Prdm12	99	73.737	Mus_pahari
ENSMZEG00005000415	PRDM12	86	81.871	MGP_SPRETEiJ_G0024331	Prdm12	99	73.737	Mus_spretus
ENSMZEG00005000415	PRDM12	86	81.579	ENSNGAG00000018480	Prdm12	99	72.727	Nannospalax_galili
ENSMZEG00005000415	PRDM12	100	75.990	ENSNBRG00000006727	prdm12b	100	76.296	Neolamprologus_brichardi
ENSMZEG00005000415	PRDM12	100	85.823	ENSNBRG00000024312	-	100	85.823	Neolamprologus_brichardi
ENSMZEG00005000415	PRDM12	100	67.758	ENSMEUG00000003828	PRDM12	99	66.247	Notamacropus_eugenii
ENSMZEG00005000415	PRDM12	86	81.287	ENSOPRG00000008680	PRDM12	98	80.994	Ochotona_princeps
ENSMZEG00005000415	PRDM12	86	81.871	ENSODEG00000016282	PRDM12	61	81.871	Octodon_degus
ENSMZEG00005000415	PRDM12	63	75.200	ENSOANG00000001043	PRDM12	100	73.600	Ornithorhynchus_anatinus
ENSMZEG00005000415	PRDM12	80	80.757	ENSOCUG00000008241	PRDM12	96	81.073	Oryctolagus_cuniculus
ENSMZEG00005000415	PRDM12	100	89.250	ENSORLG00000017558	-	100	87.750	Oryzias_latipes
ENSMZEG00005000415	PRDM12	100	75.248	ENSORLG00000007114	prdm12b	99	74.010	Oryzias_latipes
ENSMZEG00005000415	PRDM12	100	75.990	ENSORLG00020019565	prdm12b	99	75.000	Oryzias_latipes_hni
ENSMZEG00005000415	PRDM12	100	89.277	ENSORLG00020013167	-	100	87.531	Oryzias_latipes_hni
ENSMZEG00005000415	PRDM12	100	89.000	ENSORLG00015003435	-	100	87.500	Oryzias_latipes_hsok
ENSMZEG00005000415	PRDM12	100	75.682	ENSORLG00015007621	prdm12b	99	74.938	Oryzias_latipes_hsok
ENSMZEG00005000415	PRDM12	100	73.399	ENSOMEG00000004134	prdm12b	99	73.399	Oryzias_melastigma
ENSMZEG00005000415	PRDM12	100	88.060	ENSOMEG00000007762	-	100	86.567	Oryzias_melastigma
ENSMZEG00005000415	PRDM12	86	81.579	ENSOGAG00000007557	PRDM12	97	81.579	Otolemur_garnettii
ENSMZEG00005000415	PRDM12	77	78.289	ENSPPAG00000031506	-	99	77.097	Pan_paniscus
ENSMZEG00005000415	PRDM12	100	67.669	ENSPPRG00000023024	PRDM12	83	74.927	Panthera_pardus
ENSMZEG00005000415	PRDM12	86	80.994	ENSPTRG00000043324	-	89	80.994	Pan_troglodytes
ENSMZEG00005000415	PRDM12	86	80.994	ENSPTRG00000021475	PRDM12	89	80.994	Pan_troglodytes
ENSMZEG00005000415	PRDM12	86	80.994	ENSPANG00000025967	PRDM12	89	80.994	Papio_anubis
ENSMZEG00005000415	PRDM12	100	78.947	ENSPKIG00000007228	prdm12b	100	78.195	Paramormyrops_kingsleyae
ENSMZEG00005000415	PRDM12	86	77.616	ENSPKIG00000004305	PRDM12	94	76.608	Paramormyrops_kingsleyae
ENSMZEG00005000415	PRDM12	100	76.010	ENSPSIG00000006739	PRDM12	99	75.000	Pelodiscus_sinensis
ENSMZEG00005000415	PRDM12	100	79.951	ENSPMGG00000002356	-	100	79.198	Periophthalmus_magnuspinnatus
ENSMZEG00005000415	PRDM12	100	74.747	ENSPMGG00000008867	prdm12b	99	74.559	Periophthalmus_magnuspinnatus
ENSMZEG00005000415	PRDM12	88	80.571	ENSPEMG00000009969	Prdm12	91	80.516	Peromyscus_maniculatus_bairdii
ENSMZEG00005000415	PRDM12	100	75.567	ENSPCIG00000024119	PRDM12	99	74.055	Phascolarctos_cinereus
ENSMZEG00005000415	PRDM12	100	75.750	ENSPFOG00000019841	prdm12b	100	75.561	Poecilia_formosa
ENSMZEG00005000415	PRDM12	100	74.874	ENSPLAG00000016626	prdm12b	99	76.190	Poecilia_latipinna
ENSMZEG00005000415	PRDM12	97	75.584	ENSPMEG00000016698	prdm12b	99	76.684	Poecilia_mexicana
ENSMZEG00005000415	PRDM12	99	77.436	ENSPREG00000003211	-	97	77.436	Poecilia_reticulata
ENSMZEG00005000415	PRDM12	100	75.126	ENSPREG00000015073	prdm12b	99	76.441	Poecilia_reticulata
ENSMZEG00005000415	PRDM12	86	80.994	ENSPPYG00000019694	PRDM12	92	80.994	Pongo_abelii
ENSMZEG00005000415	PRDM12	86	81.579	ENSPCOG00000022255	PRDM12	89	81.579	Propithecus_coquereli
ENSMZEG00005000415	PRDM12	86	81.579	ENSPVAG00000001511	PRDM12	89	81.579	Pteropus_vampyrus
ENSMZEG00005000415	PRDM12	100	99.747	ENSPNYG00000013589	-	100	99.747	Pundamilia_nyererei
ENSMZEG00005000415	PRDM12	100	76.923	ENSPNYG00000009607	prdm12b	100	76.179	Pundamilia_nyererei
ENSMZEG00005000415	PRDM12	100	78.283	ENSPNAG00000024532	prdm12b	100	79.545	Pygocentrus_nattereri
ENSMZEG00005000415	PRDM12	100	73.485	ENSPNAG00000013396	PRDM12	100	73.552	Pygocentrus_nattereri
ENSMZEG00005000415	PRDM12	86	81.871	ENSRNOG00000009218	Prdm12	99	73.737	Rattus_norvegicus
ENSMZEG00005000415	PRDM12	84	80.539	ENSRBIG00000042712	PRDM12	90	78.736	Rhinopithecus_bieti
ENSMZEG00005000415	PRDM12	85	80.769	ENSRROG00000043554	PRDM12	99	80.769	Rhinopithecus_roxellana
ENSMZEG00005000415	PRDM12	100	75.377	ENSSHAG00000015972	PRDM12	99	73.618	Sarcophilus_harrisii
ENSMZEG00005000415	PRDM12	100	73.350	ENSSMAG00000003754	prdm12b	100	73.077	Scophthalmus_maximus
ENSMZEG00005000415	PRDM12	100	75.854	ENSSDUG00000023498	prdm12b	100	74.453	Seriola_dumerili
ENSMZEG00005000415	PRDM12	100	85.185	ENSSDUG00000019071	-	100	84.691	Seriola_dumerili
ENSMZEG00005000415	PRDM12	100	82.620	ENSSLDG00000013562	-	100	82.620	Seriola_lalandi_dorsalis
ENSMZEG00005000415	PRDM12	100	76.658	ENSSLDG00000009557	prdm12b	100	74.510	Seriola_lalandi_dorsalis
ENSMZEG00005000415	PRDM12	100	77.020	ENSSPUG00000013424	PRDM12	99	75.253	Sphenodon_punctatus
ENSMZEG00005000415	PRDM12	100	75.000	ENSSPAG00000022420	-	100	75.743	Stegastes_partitus
ENSMZEG00005000415	PRDM12	100	77.228	ENSSPAG00000018824	prdm12b	100	75.990	Stegastes_partitus
ENSMZEG00005000415	PRDM12	86	81.579	ENSSSCG00000005703	PRDM12	89	81.579	Sus_scrofa
ENSMZEG00005000415	PRDM12	100	76.131	ENSTRUG00000018659	prdm12b	100	75.628	Takifugu_rubripes
ENSMZEG00005000415	PRDM12	100	80.101	ENSTRUG00000013239	-	100	80.101	Takifugu_rubripes
ENSMZEG00005000415	PRDM12	100	76.382	ENSTNIG00000005859	-	99	75.628	Tetraodon_nigroviridis
ENSMZEG00005000415	PRDM12	100	74.874	ENSTNIG00000009020	prdm12b	99	73.684	Tetraodon_nigroviridis
ENSMZEG00005000415	PRDM12	86	81.579	ENSUAMG00000009653	PRDM12	90	81.579	Ursus_americanus
ENSMZEG00005000415	PRDM12	86	81.579	ENSVVUG00000027662	PRDM12	77	81.579	Vulpes_vulpes
ENSMZEG00005000415	PRDM12	100	76.382	ENSXCOG00000002836	prdm12b	99	76.692	Xiphophorus_couchianus
ENSMZEG00005000415	PRDM12	100	76.382	ENSXMAG00000005537	prdm12b	100	76.692	Xiphophorus_maculatus
ENSMZEG00005000415	PRDM12	100	85.185	ENSXMAG00000028012	-	100	85.679	Xiphophorus_maculatus