EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005000698 (Gene tree)
Gene ID: 101469296
Gene Symbol: RBPMS
Alias: HERMES
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 38421 bases
Position: chrLG3:23882972-23921392
Accession: 101469296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005000800	RRM_1	PF00076.22	2.6e-11	1	1
ENSMZEP00005000816	RRM_1	PF00076.22	3e-11	1	1
ENSMZEP00005000795	RRM_1	PF00076.22	3.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005000870	RBPMS-201	4186	XM_024806530	ENSMZEP00005000795	194 (aa)	XP_024662298	UPI00022B0AA7
ENSMZET00005000892	RBPMS-203	540	-	ENSMZEP00005000816	179 (aa)	-	-
ENSMZET00005000875	RBPMS-202	1163	-	ENSMZEP00005000800	173 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005000698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005000698's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005000698	RBPMS	97	87.429	ENSG00000157110	RBPMS	99	85.052	Homo_sapiens
ENSMZEG00005000698	RBPMS	100	98.454	ENSAPOG00000022304	RBPMS	100	98.454	Acanthochromis_polyacanthus
ENSMZEG00005000698	RBPMS	86	89.032	ENSAMEG00000001522	RBPMS	75	85.455	Ailuropoda_melanoleuca
ENSMZEG00005000698	RBPMS	67	98.276	ENSACIG00000011395	RBPMS	75	85.000	Amphilophus_citrinellus
ENSMZEG00005000698	RBPMS	100	98.454	ENSAOCG00000007731	RBPMS	100	98.454	Amphiprion_ocellaris
ENSMZEG00005000698	RBPMS	100	98.454	ENSAPEG00000023543	RBPMS	100	98.454	Amphiprion_percula
ENSMZEG00005000698	RBPMS	100	98.454	ENSATEG00000018184	RBPMS	100	98.454	Anabas_testudineus
ENSMZEG00005000698	RBPMS	97	87.500	ENSACAG00000003012	RBPMS	100	82.143	Anolis_carolinensis
ENSMZEG00005000698	RBPMS	97	87.429	ENSANAG00000028150	RBPMS	99	85.052	Aotus_nancymaae
ENSMZEG00005000698	RBPMS	100	100.000	ENSACLG00000002926	RBPMS	100	100.000	Astatotilapia_calliptera
ENSMZEG00005000698	RBPMS	98	94.886	ENSAMXG00000033491	rbpms	99	92.708	Astyanax_mexicanus
ENSMZEG00005000698	RBPMS	97	86.857	ENSBTAG00000033727	RBPMS	81	84.746	Bos_taurus
ENSMZEG00005000698	RBPMS	97	87.429	ENSCJAG00000012366	RBPMS	99	85.052	Callithrix_jacchus
ENSMZEG00005000698	RBPMS	90	85.876	ENSCAFG00000006503	RBPMS	81	85.876	Canis_familiaris
ENSMZEG00005000698	RBPMS	90	85.876	ENSCAFG00020001031	RBPMS	81	85.876	Canis_lupus_dingo
ENSMZEG00005000698	RBPMS	99	78.462	ENSCHIG00000027156	RBPMS	100	78.680	Capra_hircus
ENSMZEG00005000698	RBPMS	64	90.000	ENSTSYG00000013982	RBPMS	83	90.000	Carlito_syrichta
ENSMZEG00005000698	RBPMS	97	87.429	ENSCPOG00000038597	RBPMS	99	84.536	Cavia_porcellus
ENSMZEG00005000698	RBPMS	97	87.429	ENSCCAG00000033226	RBPMS	99	85.052	Cebus_capucinus
ENSMZEG00005000698	RBPMS	97	87.429	ENSCATG00000036486	RBPMS	99	85.052	Cercocebus_atys
ENSMZEG00005000698	RBPMS	97	87.931	ENSCLAG00000001518	RBPMS	100	87.931	Chinchilla_lanigera
ENSMZEG00005000698	RBPMS	90	85.876	ENSCSAG00000015838	RBPMS	81	85.876	Chlorocebus_sabaeus
ENSMZEG00005000698	RBPMS	85	89.610	ENSCHOG00000008745	RBPMS	79	89.032	Choloepus_hoffmanni
ENSMZEG00005000698	RBPMS	97	86.286	ENSCPBG00000013437	RBPMS	100	82.051	Chrysemys_picta_bellii
ENSMZEG00005000698	RBPMS	97	87.931	ENSCANG00000034997	RBPMS	100	87.931	Colobus_angolensis_palliatus
ENSMZEG00005000698	RBPMS	97	82.386	ENSCGRG00001002814	Rbpms	99	84.103	Cricetulus_griseus_chok1gshd
ENSMZEG00005000698	RBPMS	97	82.857	ENSCGRG00000006095	Rbpms	100	87.429	Cricetulus_griseus_crigri
ENSMZEG00005000698	RBPMS	100	97.423	ENSCSEG00000002777	rbpms	100	97.423	Cynoglossus_semilaevis
ENSMZEG00005000698	RBPMS	100	98.454	ENSCVAG00000013975	RBPMS	100	98.454	Cyprinodon_variegatus
ENSMZEG00005000698	RBPMS	94	71.598	ENSDARG00000099396	rbpms	100	71.598	Danio_rerio
ENSMZEG00005000698	RBPMS	86	89.032	ENSDNOG00000008126	RBPMS	81	84.746	Dasypus_novemcinctus
ENSMZEG00005000698	RBPMS	90	86.441	ENSETEG00000017582	RBPMS	81	86.441	Echinops_telfairi
ENSMZEG00005000698	RBPMS	85	89.610	ENSEASG00005016962	RBPMS	78	89.610	Equus_asinus_asinus
ENSMZEG00005000698	RBPMS	90	85.311	ENSECAG00000020735	RBPMS	78	89.610	Equus_caballus
ENSMZEG00005000698	RBPMS	100	93.299	ENSELUG00000009787	rbpms	100	93.299	Esox_lucius
ENSMZEG00005000698	RBPMS	97	87.429	ENSFCAG00000025639	-	99	84.536	Felis_catus
ENSMZEG00005000698	RBPMS	96	52.907	ENSFCAG00000022292	-	93	47.959	Felis_catus
ENSMZEG00005000698	RBPMS	97	87.931	ENSFDAG00000012078	RBPMS	100	87.931	Fukomys_damarensis
ENSMZEG00005000698	RBPMS	100	97.938	ENSFHEG00000000618	rbpms	100	97.938	Fundulus_heteroclitus
ENSMZEG00005000698	RBPMS	77	62.667	ENSGMOG00000009646	-	100	62.667	Gadus_morhua
ENSMZEG00005000698	RBPMS	100	98.969	ENSGAFG00000016566	RBPMS	100	98.969	Gambusia_affinis
ENSMZEG00005000698	RBPMS	100	87.629	ENSGACG00000019471	rbpms	100	87.629	Gasterosteus_aculeatus
ENSMZEG00005000698	RBPMS	63	89.908	ENSGAGG00000023634	RBPMS	53	83.740	Gopherus_agassizii
ENSMZEG00005000698	RBPMS	100	100.000	ENSHBUG00000005888	RBPMS	100	100.000	Haplochromis_burtoni
ENSMZEG00005000698	RBPMS	97	87.429	ENSHGLG00000002303	RBPMS	99	85.052	Heterocephalus_glaber_female
ENSMZEG00005000698	RBPMS	97	87.931	ENSHGLG00100008787	RBPMS	100	87.931	Heterocephalus_glaber_male
ENSMZEG00005000698	RBPMS	98	97.382	ENSHCOG00000005774	rbpms	99	97.382	Hippocampus_comes
ENSMZEG00005000698	RBPMS	99	89.503	ENSIPUG00000012459	RBPMS	98	89.418	Ictalurus_punctatus
ENSMZEG00005000698	RBPMS	97	87.429	ENSSTOG00000026546	RBPMS	99	84.536	Ictidomys_tridecemlineatus
ENSMZEG00005000698	RBPMS	97	87.429	ENSJJAG00000014024	Rbpms	99	85.052	Jaculus_jaculus
ENSMZEG00005000698	RBPMS	99	77.654	ENSKMAG00000006377	RBPMS	91	80.447	Kryptolebias_marmoratus
ENSMZEG00005000698	RBPMS	100	98.454	ENSLBEG00000027989	RBPMS	100	98.454	Labrus_bergylta
ENSMZEG00005000698	RBPMS	99	92.135	ENSLOCG00000013199	RBPMS	98	92.135	Lepisosteus_oculatus
ENSMZEG00005000698	RBPMS	90	85.876	ENSLAFG00000000209	RBPMS	81	85.876	Loxodonta_africana
ENSMZEG00005000698	RBPMS	97	87.429	ENSMFAG00000036911	RBPMS	99	85.052	Macaca_fascicularis
ENSMZEG00005000698	RBPMS	97	87.429	ENSMMUG00000000458	RBPMS	99	85.052	Macaca_mulatta
ENSMZEG00005000698	RBPMS	97	87.429	ENSMNEG00000043805	RBPMS	99	85.052	Macaca_nemestrina
ENSMZEG00005000698	RBPMS	97	87.931	ENSMLEG00000015635	RBPMS	100	87.931	Mandrillus_leucophaeus
ENSMZEG00005000698	RBPMS	76	98.473	ENSMAMG00000004604	RBPMS	94	76.757	Mastacembelus_armatus
ENSMZEG00005000698	RBPMS	97	85.143	ENSMGAG00000005088	RBPMS	90	85.143	Meleagris_gallopavo
ENSMZEG00005000698	RBPMS	97	82.386	ENSMAUG00000018892	Rbpms	99	84.103	Mesocricetus_auratus
ENSMZEG00005000698	RBPMS	97	82.857	ENSMICG00000001295	RBPMS	99	84.021	Microcebus_murinus
ENSMZEG00005000698	RBPMS	97	82.386	ENSMOCG00000014009	Rbpms	99	84.103	Microtus_ochrogaster
ENSMZEG00005000698	RBPMS	91	94.444	ENSMMOG00000012036	RBPMS	69	94.444	Mola_mola
ENSMZEG00005000698	RBPMS	97	88.000	ENSMODG00000019006	RBPMS	89	84.656	Monodelphis_domestica
ENSMZEG00005000698	RBPMS	100	96.392	ENSMALG00000003261	RBPMS	100	96.392	Monopterus_albus
ENSMZEG00005000698	RBPMS	97	81.818	MGP_CAROLIEiJ_G0030970	Rbpms	99	83.590	Mus_caroli
ENSMZEG00005000698	RBPMS	97	81.818	ENSMUSG00000031586	Rbpms	99	83.590	Mus_musculus
ENSMZEG00005000698	RBPMS	97	81.818	MGP_PahariEiJ_G0021439	Rbpms	99	83.590	Mus_pahari
ENSMZEG00005000698	RBPMS	97	81.818	MGP_SPRETEiJ_G0032087	Rbpms	99	83.590	Mus_spretus
ENSMZEG00005000698	RBPMS	86	89.032	ENSMPUG00000011314	RBPMS	75	85.455	Mustela_putorius_furo
ENSMZEG00005000698	RBPMS	100	84.694	ENSMLUG00000009391	RBPMS	100	86.076	Myotis_lucifugus
ENSMZEG00005000698	RBPMS	90	85.876	ENSNGAG00000011141	Rbpms	81	85.876	Nannospalax_galili
ENSMZEG00005000698	RBPMS	100	100.000	ENSNBRG00000003313	RBPMS	100	100.000	Neolamprologus_brichardi
ENSMZEG00005000698	RBPMS	97	87.429	ENSNLEG00000036183	-	99	84.536	Nomascus_leucogenys
ENSMZEG00005000698	RBPMS	76	85.606	ENSOPRG00000013151	RBPMS	60	85.606	Ochotona_princeps
ENSMZEG00005000698	RBPMS	97	87.429	ENSODEG00000006700	RBPMS	99	85.052	Octodon_degus
ENSMZEG00005000698	RBPMS	97	99.425	ENSONIG00000007546	RBPMS	100	99.425	Oreochromis_niloticus
ENSMZEG00005000698	RBPMS	90	85.876	ENSOCUG00000008572	RBPMS	81	85.876	Oryctolagus_cuniculus
ENSMZEG00005000698	RBPMS	100	97.938	ENSORLG00000004135	-	100	97.938	Oryzias_latipes
ENSMZEG00005000698	RBPMS	100	98.454	ENSORLG00020016179	RBPMS	100	98.454	Oryzias_latipes_hni
ENSMZEG00005000698	RBPMS	100	98.454	ENSORLG00015013770	RBPMS	100	98.454	Oryzias_latipes_hsok
ENSMZEG00005000698	RBPMS	100	97.938	ENSOMEG00000005044	RBPMS	100	97.938	Oryzias_melastigma
ENSMZEG00005000698	RBPMS	92	84.530	ENSOGAG00000030298	RBPMS	81	84.530	Otolemur_garnettii
ENSMZEG00005000698	RBPMS	73	84.252	ENSOARG00000010366	RBPMS	89	84.252	Ovis_aries
ENSMZEG00005000698	RBPMS	97	87.931	ENSPPAG00000033108	RBPMS	100	87.931	Pan_paniscus
ENSMZEG00005000698	RBPMS	97	87.429	ENSPPRG00000004836	RBPMS	99	84.536	Panthera_pardus
ENSMZEG00005000698	RBPMS	97	87.931	ENSPTIG00000015964	RBPMS	89	87.931	Panthera_tigris_altaica
ENSMZEG00005000698	RBPMS	97	87.429	ENSPTRG00000020135	RBPMS	99	85.052	Pan_troglodytes
ENSMZEG00005000698	RBPMS	97	87.429	ENSPANG00000008143	RBPMS	99	85.052	Papio_anubis
ENSMZEG00005000698	RBPMS	100	90.722	ENSPKIG00000000535	-	100	90.722	Paramormyrops_kingsleyae
ENSMZEG00005000698	RBPMS	97	91.379	ENSPKIG00000004836	rbpms	99	88.830	Paramormyrops_kingsleyae
ENSMZEG00005000698	RBPMS	97	86.207	ENSPSIG00000006136	RBPMS	99	86.207	Pelodiscus_sinensis
ENSMZEG00005000698	RBPMS	88	96.835	ENSPMGG00000018012	RBPMS	74	97.468	Periophthalmus_magnuspinnatus
ENSMZEG00005000698	RBPMS	97	82.486	ENSPEMG00000021130	Rbpms	99	83.673	Peromyscus_maniculatus_bairdii
ENSMZEG00005000698	RBPMS	97	86.857	ENSPCIG00000019298	-	71	83.041	Phascolarctos_cinereus
ENSMZEG00005000698	RBPMS	100	98.969	ENSPFOG00000017158	RBPMS	100	98.969	Poecilia_formosa
ENSMZEG00005000698	RBPMS	100	98.969	ENSPLAG00000010767	RBPMS	100	98.969	Poecilia_latipinna
ENSMZEG00005000698	RBPMS	100	98.969	ENSPMEG00000009788	RBPMS	100	98.969	Poecilia_mexicana
ENSMZEG00005000698	RBPMS	100	98.969	ENSPREG00000016959	RBPMS	100	98.969	Poecilia_reticulata
ENSMZEG00005000698	RBPMS	90	85.876	ENSPPYG00000018487	RBPMS	89	81.457	Pongo_abelii
ENSMZEG00005000698	RBPMS	64	90.000	ENSPCAG00000013493	-	100	90.000	Procavia_capensis
ENSMZEG00005000698	RBPMS	92	70.166	ENSPCOG00000015948	RBPMS	75	86.154	Propithecus_coquereli
ENSMZEG00005000698	RBPMS	90	85.311	ENSPVAG00000001661	RBPMS	81	85.311	Pteropus_vampyrus
ENSMZEG00005000698	RBPMS	100	100.000	ENSPNYG00000001172	RBPMS	100	100.000	Pundamilia_nyererei
ENSMZEG00005000698	RBPMS	99	95.833	ENSPNAG00000029160	RBPMS	99	95.833	Pygocentrus_nattereri
ENSMZEG00005000698	RBPMS	92	79.121	ENSRNOG00000013328	Rbpms	88	83.516	Rattus_norvegicus
ENSMZEG00005000698	RBPMS	97	87.931	ENSRBIG00000038218	RBPMS	100	87.931	Rhinopithecus_bieti
ENSMZEG00005000698	RBPMS	97	87.429	ENSRROG00000042518	RBPMS	99	85.052	Rhinopithecus_roxellana
ENSMZEG00005000698	RBPMS	97	86.857	ENSSBOG00000026670	RBPMS	99	84.536	Saimiri_boliviensis_boliviensis
ENSMZEG00005000698	RBPMS	98	86.441	ENSSHAG00000010114	RBPMS	92	86.517	Sarcophilus_harrisii
ENSMZEG00005000698	RBPMS	100	92.737	ENSSFOG00015000417	rbpms	100	90.206	Scleropages_formosus
ENSMZEG00005000698	RBPMS	97	90.173	ENSSFOG00015017481	-	99	86.702	Scleropages_formosus
ENSMZEG00005000698	RBPMS	100	96.907	ENSSMAG00000010871	rbpms	100	96.907	Scophthalmus_maximus
ENSMZEG00005000698	RBPMS	100	98.969	ENSSDUG00000010894	RBPMS	100	98.969	Seriola_dumerili
ENSMZEG00005000698	RBPMS	100	98.969	ENSSLDG00000012916	RBPMS	100	98.969	Seriola_lalandi_dorsalis
ENSMZEG00005000698	RBPMS	90	81.356	ENSSARG00000000274	RBPMS	81	81.356	Sorex_araneus
ENSMZEG00005000698	RBPMS	99	86.034	ENSSPUG00000017525	RBPMS	69	86.034	Sphenodon_punctatus
ENSMZEG00005000698	RBPMS	91	91.772	ENSSPAG00000004777	rbpms	96	91.772	Stegastes_partitus
ENSMZEG00005000698	RBPMS	97	87.429	ENSSSCG00000015846	RBPMS	99	84.536	Sus_scrofa
ENSMZEG00005000698	RBPMS	97	86.286	ENSTGUG00000001776	RBPMS	99	82.540	Taeniopygia_guttata
ENSMZEG00005000698	RBPMS	100	96.392	ENSTRUG00000000041	RBPMS	100	96.392	Takifugu_rubripes
ENSMZEG00005000698	RBPMS	90	85.227	ENSTTRG00000012451	RBPMS	81	85.227	Tursiops_truncatus
ENSMZEG00005000698	RBPMS	68	87.179	ENSUAMG00000026353	RBPMS	76	87.179	Ursus_americanus
ENSMZEG00005000698	RBPMS	91	86.585	ENSUMAG00000007347	RBPMS	75	89.677	Ursus_maritimus
ENSMZEG00005000698	RBPMS	85	89.610	ENSVPAG00000010991	RBPMS	79	89.032	Vicugna_pacos
ENSMZEG00005000698	RBPMS	97	87.429	ENSVVUG00000019770	RBPMS	99	85.052	Vulpes_vulpes
ENSMZEG00005000698	RBPMS	97	87.931	ENSXETG00000011290	rbpms	100	87.931	Xenopus_tropicalis
ENSMZEG00005000698	RBPMS	99	92.090	ENSXCOG00000002436	RBPMS	92	92.090	Xiphophorus_couchianus
ENSMZEG00005000698	RBPMS	100	98.969	ENSXMAG00000027637	RBPMS	100	98.969	Xiphophorus_maculatus