EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005000884 (Gene tree)
Gene ID: 101464998
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 9130 bases
Position: chrLG4:27798155-27807284
Accession: 101464998
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005001019	tRNA_int_end_N2	PF12928.7	4.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005001099	-	4082	XM_004556393	ENSMZEP00005001019	512 (aa)	XP_004556450	UPI000D300F2B

Gene Model

Click here to download ENSMZEG00005000884's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005000884's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005000884	tsen54	96	46.139	ENSG00000182173	TSEN54	100	66.667	Homo_sapiens
ENSMZEG00005000884	tsen54	100	78.530	ENSAPOG00000009659	tsen54	100	77.273	Acanthochromis_polyacanthus
ENSMZEG00005000884	tsen54	96	44.487	ENSAMEG00000009414	TSEN54	96	44.747	Ailuropoda_melanoleuca
ENSMZEG00005000884	tsen54	100	79.691	ENSAOCG00000000152	tsen54	98	79.691	Amphiprion_ocellaris
ENSMZEG00005000884	tsen54	100	78.723	ENSAPEG00000018931	tsen54	98	79.304	Amphiprion_percula
ENSMZEG00005000884	tsen54	100	73.684	ENSATEG00000019860	tsen54	100	74.436	Anabas_testudineus
ENSMZEG00005000884	tsen54	86	45.969	ENSAPLG00000009419	TSEN54	99	45.259	Anas_platyrhynchos
ENSMZEG00005000884	tsen54	97	45.785	ENSACAG00000006714	TSEN54	98	46.023	Anolis_carolinensis
ENSMZEG00005000884	tsen54	96	46.214	ENSANAG00000024061	TSEN54	96	46.628	Aotus_nancymaae
ENSMZEG00005000884	tsen54	100	99.609	ENSACLG00000019800	tsen54	100	99.609	Astatotilapia_calliptera
ENSMZEG00005000884	tsen54	97	57.822	ENSAMXG00000006546	tsen54	97	58.250	Astyanax_mexicanus
ENSMZEG00005000884	tsen54	96	44.381	ENSBTAG00000000824	TSEN54	97	44.834	Bos_taurus
ENSMZEG00005000884	tsen54	96	45.631	ENSCJAG00000014278	TSEN54	96	46.050	Callithrix_jacchus
ENSMZEG00005000884	tsen54	96	45.000	ENSCAFG00000004798	TSEN54	97	45.155	Canis_familiaris
ENSMZEG00005000884	tsen54	96	45.000	ENSCAFG00020000312	TSEN54	97	45.155	Canis_lupus_dingo
ENSMZEG00005000884	tsen54	96	44.722	ENSCHIG00000019908	TSEN54	97	44.574	Capra_hircus
ENSMZEG00005000884	tsen54	86	44.589	ENSTSYG00000037439	TSEN54	99	44.372	Carlito_syrichta
ENSMZEG00005000884	tsen54	96	46.243	ENSCCAG00000036624	TSEN54	96	46.050	Cebus_capucinus
ENSMZEG00005000884	tsen54	96	46.435	ENSCATG00000042877	TSEN54	96	46.360	Cercocebus_atys
ENSMZEG00005000884	tsen54	96	45.315	ENSCLAG00000002924	TSEN54	96	45.315	Chinchilla_lanigera
ENSMZEG00005000884	tsen54	96	46.332	ENSCSAG00000004809	TSEN54	97	46.552	Chlorocebus_sabaeus
ENSMZEG00005000884	tsen54	97	47.104	ENSCPBG00000028071	TSEN54	98	47.081	Chrysemys_picta_bellii
ENSMZEG00005000884	tsen54	96	46.628	ENSCANG00000028053	TSEN54	97	46.743	Colobus_angolensis_palliatus
ENSMZEG00005000884	tsen54	96	44.595	ENSCGRG00001020029	Tsen54	97	44.595	Cricetulus_griseus_chok1gshd
ENSMZEG00005000884	tsen54	84	42.572	ENSCGRG00000016289	Tsen54	99	42.572	Cricetulus_griseus_crigri
ENSMZEG00005000884	tsen54	80	56.132	ENSCSEG00000020586	tsen54	99	56.132	Cynoglossus_semilaevis
ENSMZEG00005000884	tsen54	80	55.048	ENSDARG00000036844	tsen54	100	55.663	Danio_rerio
ENSMZEG00005000884	tsen54	96	44.359	ENSDNOG00000018452	TSEN54	97	45.124	Dasypus_novemcinctus
ENSMZEG00005000884	tsen54	96	46.471	ENSDORG00000004073	Tsen54	97	46.471	Dipodomys_ordii
ENSMZEG00005000884	tsen54	96	32.115	ENSEBUG00000005203	TSEN54	95	32.115	Eptatretus_burgeri
ENSMZEG00005000884	tsen54	96	45.243	ENSEASG00005000579	TSEN54	97	45.243	Equus_asinus_asinus
ENSMZEG00005000884	tsen54	96	45.243	ENSECAG00000004924	TSEN54	97	45.243	Equus_caballus
ENSMZEG00005000884	tsen54	86	43.601	ENSEEUG00000008467	TSEN54	99	43.167	Erinaceus_europaeus
ENSMZEG00005000884	tsen54	99	59.294	ENSELUG00000017703	tsen54	92	58.564	Esox_lucius
ENSMZEG00005000884	tsen54	96	45.192	ENSFCAG00000023712	TSEN54	97	45.714	Felis_catus
ENSMZEG00005000884	tsen54	93	45.639	ENSFALG00000001119	TSEN54	92	45.825	Ficedula_albicollis
ENSMZEG00005000884	tsen54	86	43.844	ENSFDAG00000019090	TSEN54	99	43.413	Fukomys_damarensis
ENSMZEG00005000884	tsen54	100	71.567	ENSFHEG00000005470	tsen54	100	71.567	Fundulus_heteroclitus
ENSMZEG00005000884	tsen54	83	57.868	ENSGMOG00000013146	tsen54	99	57.868	Gadus_morhua
ENSMZEG00005000884	tsen54	93	42.744	ENSGALG00000047163	TSEN54	96	42.231	Gallus_gallus
ENSMZEG00005000884	tsen54	100	67.562	ENSGAFG00000005111	tsen54	100	67.562	Gambusia_affinis
ENSMZEG00005000884	tsen54	96	65.606	ENSGACG00000014987	tsen54	100	65.010	Gasterosteus_aculeatus
ENSMZEG00005000884	tsen54	97	47.104	ENSGAGG00000006825	TSEN54	96	47.092	Gopherus_agassizii
ENSMZEG00005000884	tsen54	96	46.318	ENSGGOG00000009417	TSEN54	99	46.731	Gorilla_gorilla
ENSMZEG00005000884	tsen54	90	98.268	ENSHBUG00000018296	tsen54	92	98.268	Haplochromis_burtoni
ENSMZEG00005000884	tsen54	96	46.272	ENSHGLG00000007979	TSEN54	97	45.731	Heterocephalus_glaber_female
ENSMZEG00005000884	tsen54	96	45.315	ENSHGLG00100005497	TSEN54	97	44.782	Heterocephalus_glaber_male
ENSMZEG00005000884	tsen54	81	63.443	ENSHCOG00000007481	tsen54	100	63.679	Hippocampus_comes
ENSMZEG00005000884	tsen54	97	52.344	ENSIPUG00000000590	tsen54	97	51.758	Ictalurus_punctatus
ENSMZEG00005000884	tsen54	96	44.802	ENSSTOG00000012883	TSEN54	97	45.211	Ictidomys_tridecemlineatus
ENSMZEG00005000884	tsen54	96	45.472	ENSJJAG00000007365	Tsen54	97	45.472	Jaculus_jaculus
ENSMZEG00005000884	tsen54	100	69.476	ENSKMAG00000006944	tsen54	100	69.476	Kryptolebias_marmoratus
ENSMZEG00005000884	tsen54	100	70.152	ENSLBEG00000004199	tsen54	100	69.962	Labrus_bergylta
ENSMZEG00005000884	tsen54	96	43.186	ENSLACG00000009497	TSEN54	99	42.418	Latimeria_chalumnae
ENSMZEG00005000884	tsen54	99	55.618	ENSLOCG00000011191	tsen54	99	55.083	Lepisosteus_oculatus
ENSMZEG00005000884	tsen54	92	44.694	ENSLAFG00000011655	TSEN54	92	44.856	Loxodonta_africana
ENSMZEG00005000884	tsen54	96	46.332	ENSMFAG00000000712	TSEN54	89	54.938	Macaca_fascicularis
ENSMZEG00005000884	tsen54	96	46.332	ENSMNEG00000029199	TSEN54	89	54.938	Macaca_nemestrina
ENSMZEG00005000884	tsen54	86	44.565	ENSMLEG00000044168	TSEN54	88	44.685	Mandrillus_leucophaeus
ENSMZEG00005000884	tsen54	100	74.046	ENSMAMG00000019773	tsen54	100	74.046	Mastacembelus_armatus
ENSMZEG00005000884	tsen54	93	42.772	ENSMGAG00000009556	TSEN54	92	43.600	Meleagris_gallopavo
ENSMZEG00005000884	tsen54	96	44.933	ENSMAUG00000016838	Tsen54	97	44.595	Mesocricetus_auratus
ENSMZEG00005000884	tsen54	96	46.351	ENSMICG00000044012	TSEN54	96	47.525	Microcebus_murinus
ENSMZEG00005000884	tsen54	96	45.769	ENSMOCG00000021585	Tsen54	97	45.000	Microtus_ochrogaster
ENSMZEG00005000884	tsen54	96	65.191	ENSMMOG00000020189	tsen54	99	67.002	Mola_mola
ENSMZEG00005000884	tsen54	96	43.985	ENSMODG00000007438	TSEN54	95	43.879	Monodelphis_domestica
ENSMZEG00005000884	tsen54	99	73.954	ENSMALG00000020573	tsen54	99	74.525	Monopterus_albus
ENSMZEG00005000884	tsen54	96	45.665	MGP_CAROLIEiJ_G0017417	Tsen54	97	45.665	Mus_caroli
ENSMZEG00005000884	tsen54	96	46.050	ENSMUSG00000020781	Tsen54	97	46.050	Mus_musculus
ENSMZEG00005000884	tsen54	96	46.958	MGP_PahariEiJ_G0018547	Tsen54	97	46.516	Mus_pahari
ENSMZEG00005000884	tsen54	96	45.873	MGP_SPRETEiJ_G0018262	Tsen54	97	45.665	Mus_spretus
ENSMZEG00005000884	tsen54	96	43.182	ENSMPUG00000013870	TSEN54	97	43.939	Mustela_putorius_furo
ENSMZEG00005000884	tsen54	96	42.389	ENSMLUG00000015298	TSEN54	96	44.600	Myotis_lucifugus
ENSMZEG00005000884	tsen54	96	45.648	ENSNGAG00000015673	Tsen54	97	45.261	Nannospalax_galili
ENSMZEG00005000884	tsen54	88	41.176	ENSMEUG00000011908	TSEN54	99	41.176	Notamacropus_eugenii
ENSMZEG00005000884	tsen54	96	42.829	ENSOPRG00000012513	TSEN54	96	42.270	Ochotona_princeps
ENSMZEG00005000884	tsen54	100	95.127	ENSONIG00000009543	tsen54	100	95.127	Oreochromis_niloticus
ENSMZEG00005000884	tsen54	96	42.125	ENSOCUG00000009875	TSEN54	97	42.166	Oryctolagus_cuniculus
ENSMZEG00005000884	tsen54	100	64.854	ENSORLG00000000852	tsen54	100	64.912	Oryzias_latipes
ENSMZEG00005000884	tsen54	100	65.243	ENSORLG00020018221	tsen54	100	65.302	Oryzias_latipes_hni
ENSMZEG00005000884	tsen54	98	66.004	ENSORLG00015009413	tsen54	99	66.068	Oryzias_latipes_hsok
ENSMZEG00005000884	tsen54	100	65.887	ENSOMEG00000014402	tsen54	97	65.887	Oryzias_melastigma
ENSMZEG00005000884	tsen54	96	44.123	ENSOGAG00000001442	TSEN54	97	44.186	Otolemur_garnettii
ENSMZEG00005000884	tsen54	86	41.756	ENSOARG00000010361	TSEN54	99	41.978	Ovis_aries
ENSMZEG00005000884	tsen54	94	45.635	ENSPPAG00000043519	TSEN54	99	46.032	Pan_paniscus
ENSMZEG00005000884	tsen54	96	45.385	ENSPPRG00000009162	TSEN54	97	45.905	Panthera_pardus
ENSMZEG00005000884	tsen54	86	44.708	ENSPTIG00000019312	TSEN54	96	44.924	Panthera_tigris_altaica
ENSMZEG00005000884	tsen54	96	46.332	ENSPTRG00000009646	TSEN54	97	46.743	Pan_troglodytes
ENSMZEG00005000884	tsen54	96	46.332	ENSPANG00000020133	TSEN54	88	55.556	Papio_anubis
ENSMZEG00005000884	tsen54	99	53.552	ENSPKIG00000023018	tsen54	99	53.916	Paramormyrops_kingsleyae
ENSMZEG00005000884	tsen54	80	44.444	ENSPSIG00000012807	TSEN54	100	43.519	Pelodiscus_sinensis
ENSMZEG00005000884	tsen54	93	48.861	ENSPMGG00000019578	tsen54	100	48.861	Periophthalmus_magnuspinnatus
ENSMZEG00005000884	tsen54	96	45.315	ENSPEMG00000014857	Tsen54	97	45.507	Peromyscus_maniculatus_bairdii
ENSMZEG00005000884	tsen54	100	69.070	ENSPFOG00000022740	tsen54	100	69.070	Poecilia_formosa
ENSMZEG00005000884	tsen54	100	69.098	ENSPLAG00000014847	tsen54	100	69.098	Poecilia_latipinna
ENSMZEG00005000884	tsen54	100	68.906	ENSPMEG00000022876	tsen54	100	68.906	Poecilia_mexicana
ENSMZEG00005000884	tsen54	100	68.714	ENSPREG00000013090	tsen54	100	68.714	Poecilia_reticulata
ENSMZEG00005000884	tsen54	91	45.455	ENSPPYG00000008629	TSEN54	99	46.947	Pongo_abelii
ENSMZEG00005000884	tsen54	92	41.358	ENSPCAG00000002093	TSEN54	96	41.358	Procavia_capensis
ENSMZEG00005000884	tsen54	96	44.553	ENSPCOG00000027880	TSEN54	97	45.648	Propithecus_coquereli
ENSMZEG00005000884	tsen54	96	44.828	ENSPVAG00000008446	TSEN54	97	45.298	Pteropus_vampyrus
ENSMZEG00005000884	tsen54	94	97.113	ENSPNYG00000010217	tsen54	100	97.113	Pundamilia_nyererei
ENSMZEG00005000884	tsen54	98	54.808	ENSPNAG00000003770	tsen54	98	54.826	Pygocentrus_nattereri
ENSMZEG00005000884	tsen54	96	45.298	ENSRNOG00000004598	Tsen54	97	45.298	Rattus_norvegicus
ENSMZEG00005000884	tsen54	96	46.243	ENSRBIG00000043040	TSEN54	90	53.571	Rhinopithecus_bieti
ENSMZEG00005000884	tsen54	96	46.243	ENSRROG00000030797	TSEN54	97	46.169	Rhinopithecus_roxellana
ENSMZEG00005000884	tsen54	96	43.301	ENSSBOG00000013543	TSEN54	96	43.931	Saimiri_boliviensis_boliviensis
ENSMZEG00005000884	tsen54	96	44.340	ENSSHAG00000018127	TSEN54	96	44.340	Sarcophilus_harrisii
ENSMZEG00005000884	tsen54	80	53.302	ENSSFOG00015004093	tsen54	99	53.647	Scleropages_formosus
ENSMZEG00005000884	tsen54	97	70.485	ENSSMAG00000012449	tsen54	98	70.680	Scophthalmus_maximus
ENSMZEG00005000884	tsen54	100	76.091	ENSSDUG00000021506	tsen54	100	76.850	Seriola_dumerili
ENSMZEG00005000884	tsen54	100	75.901	ENSSLDG00000016303	tsen54	100	76.660	Seriola_lalandi_dorsalis
ENSMZEG00005000884	tsen54	79	42.923	ENSSPUG00000008988	TSEN54	98	42.369	Sphenodon_punctatus
ENSMZEG00005000884	tsen54	93	75.205	ENSSPAG00000008098	-	100	75.205	Stegastes_partitus
ENSMZEG00005000884	tsen54	81	68.794	ENSSPAG00000008047	tsen54	100	68.794	Stegastes_partitus
ENSMZEG00005000884	tsen54	96	45.472	ENSSSCG00000036852	TSEN54	97	45.472	Sus_scrofa
ENSMZEG00005000884	tsen54	86	45.033	ENSTGUG00000008548	TSEN54	99	45.033	Taeniopygia_guttata
ENSMZEG00005000884	tsen54	100	67.704	ENSTRUG00000004230	tsen54	100	67.704	Takifugu_rubripes
ENSMZEG00005000884	tsen54	96	64.870	ENSTNIG00000011281	tsen54	98	65.538	Tetraodon_nigroviridis
ENSMZEG00005000884	tsen54	86	42.672	ENSTTRG00000015828	TSEN54	99	42.950	Tursiops_truncatus
ENSMZEG00005000884	tsen54	80	41.876	ENSUAMG00000010045	TSEN54	99	41.591	Ursus_americanus
ENSMZEG00005000884	tsen54	83	43.237	ENSUMAG00000008979	TSEN54	99	43.018	Ursus_maritimus
ENSMZEG00005000884	tsen54	96	45.243	ENSVVUG00000011411	TSEN54	97	45.401	Vulpes_vulpes
ENSMZEG00005000884	tsen54	97	44.639	ENSXETG00000012532	tsen54	100	62.500	Xenopus_tropicalis
ENSMZEG00005000884	tsen54	97	60.643	ENSXCOG00000018245	tsen54	100	63.309	Xiphophorus_couchianus
ENSMZEG00005000884	tsen54	100	68.750	ENSXMAG00000018818	tsen54	100	68.750	Xiphophorus_maculatus