EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005000987 (Gene tree)
Gene ID: 101477090
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: protein LSM14 homolog B-B
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 2398 bases
Position: chrAGTA05000116.1:185851-188248
Accession: 101477090
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005001143	FDF	PF09532.10	9.9e-08	1	1
ENSMZEP00005001143	SM-ATX	PF14438.6	2.8e-07	1	1
ENSMZEP00005001143	LSM14	PF12701.7	2.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005001231	-	1507	XM_004574141	ENSMZEP00005001143	365 (aa)	XP_004574198	UPI000329DF46

Gene Model

Click here to download ENSMZEG00005000987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005000987's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005000987	lsm14b	91	54.696	ENSG00000149657	LSM14B	80	65.556	Homo_sapiens
ENSMZEG00005000987	lsm14b	100	82.432	ENSAPOG00000001780	lsm14b	100	82.432	Acanthochromis_polyacanthus
ENSMZEG00005000987	lsm14b	92	47.395	ENSAMEG00000013430	LSM14B	91	44.198	Ailuropoda_melanoleuca
ENSMZEG00005000987	lsm14b	61	40.909	ENSACIG00000003147	LSM14B	87	36.975	Amphilophus_citrinellus
ENSMZEG00005000987	lsm14b	99	82.597	ENSACIG00000012266	lsm14b	99	82.597	Amphilophus_citrinellus
ENSMZEG00005000987	lsm14b	100	83.514	ENSAOCG00000012380	lsm14b	100	83.514	Amphiprion_ocellaris
ENSMZEG00005000987	lsm14b	93	47.721	ENSAOCG00000006667	LSM14B	89	47.429	Amphiprion_ocellaris
ENSMZEG00005000987	lsm14b	100	74.457	ENSAPEG00000023633	lsm14b	100	72.087	Amphiprion_percula
ENSMZEG00005000987	lsm14b	65	43.214	ENSATEG00000015895	LSM14B	87	41.786	Anabas_testudineus
ENSMZEG00005000987	lsm14b	100	72.193	ENSATEG00000016603	lsm14b	100	71.658	Anabas_testudineus
ENSMZEG00005000987	lsm14b	81	45.455	ENSAPLG00000013203	LSM14B	89	43.017	Anas_platyrhynchos
ENSMZEG00005000987	lsm14b	99	51.759	ENSACAG00000016195	LSM14B	99	50.758	Anolis_carolinensis
ENSMZEG00005000987	lsm14b	92	52.329	ENSANAG00000037915	LSM14B	89	49.591	Aotus_nancymaae
ENSMZEG00005000987	lsm14b	100	99.454	ENSACLG00000019663	lsm14b	100	99.454	Astatotilapia_calliptera
ENSMZEG00005000987	lsm14b	90	59.831	ENSAMXG00000002865	lsm14b	90	59.104	Astyanax_mexicanus
ENSMZEG00005000987	lsm14b	92	48.139	ENSBTAG00000021558	LSM14B	90	44.938	Bos_taurus
ENSMZEG00005000987	lsm14b	92	52.603	ENSCJAG00000014434	LSM14B	89	49.046	Callithrix_jacchus
ENSMZEG00005000987	lsm14b	81	45.055	ENSCAFG00000012518	LSM14B	89	42.340	Canis_familiaris
ENSMZEG00005000987	lsm14b	92	54.144	ENSCAFG00020022150	LSM14B	89	52.394	Canis_lupus_dingo
ENSMZEG00005000987	lsm14b	92	54.121	ENSCHIG00000010284	-	89	50.546	Capra_hircus
ENSMZEG00005000987	lsm14b	99	38.119	ENSCHIG00000022681	-	90	37.466	Capra_hircus
ENSMZEG00005000987	lsm14b	81	49.383	ENSTSYG00000031914	LSM14B	79	47.516	Carlito_syrichta
ENSMZEG00005000987	lsm14b	81	51.077	ENSCAPG00000013059	LSM14B	89	47.975	Cavia_aperea
ENSMZEG00005000987	lsm14b	81	51.385	ENSCPOG00000038080	LSM14B	89	48.125	Cavia_porcellus
ENSMZEG00005000987	lsm14b	92	52.603	ENSCCAG00000021267	LSM14B	89	48.649	Cebus_capucinus
ENSMZEG00005000987	lsm14b	91	37.950	ENSCCAG00000024900	-	74	35.753	Cebus_capucinus
ENSMZEG00005000987	lsm14b	91	54.420	ENSCATG00000036006	LSM14B	89	50.409	Cercocebus_atys
ENSMZEG00005000987	lsm14b	81	50.309	ENSCLAG00000003186	LSM14B	89	47.649	Chinchilla_lanigera
ENSMZEG00005000987	lsm14b	92	48.883	ENSCSAG00000015729	LSM14B	90	46.173	Chlorocebus_sabaeus
ENSMZEG00005000987	lsm14b	67	34.672	ENSCHOG00000006997	-	86	30.242	Choloepus_hoffmanni
ENSMZEG00005000987	lsm14b	92	48.878	ENSCPBG00000027065	LSM14B	91	46.954	Chrysemys_picta_bellii
ENSMZEG00005000987	lsm14b	81	50.926	ENSCANG00000036986	LSM14B	89	46.201	Colobus_angolensis_palliatus
ENSMZEG00005000987	lsm14b	92	54.017	ENSCGRG00001018399	Lsm14b	89	49.730	Cricetulus_griseus_chok1gshd
ENSMZEG00005000987	lsm14b	52	42.105	ENSCGRG00000002484	-	78	38.235	Cricetulus_griseus_crigri
ENSMZEG00005000987	lsm14b	60	39.927	ENSCGRG00000006111	-	90	34.354	Cricetulus_griseus_crigri
ENSMZEG00005000987	lsm14b	99	72.193	ENSCSEG00000004722	lsm14b	99	71.123	Cynoglossus_semilaevis
ENSMZEG00005000987	lsm14b	94	47.253	ENSCSEG00000020669	LSM14B	90	46.197	Cynoglossus_semilaevis
ENSMZEG00005000987	lsm14b	63	37.805	ENSCVAG00000012433	-	89	35.443	Cyprinodon_variegatus
ENSMZEG00005000987	lsm14b	99	55.754	ENSDARG00000025386	lsm14b	99	56.072	Danio_rerio
ENSMZEG00005000987	lsm14b	60	39.583	ENSDNOG00000025246	LSM14B	88	35.172	Dasypus_novemcinctus
ENSMZEG00005000987	lsm14b	81	49.848	ENSDORG00000016683	Lsm14b	78	46.769	Dipodomys_ordii
ENSMZEG00005000987	lsm14b	93	43.324	ENSETEG00000001869	-	90	42.061	Echinops_telfairi
ENSMZEG00005000987	lsm14b	56	39.167	ENSETEG00000011188	-	99	36.626	Echinops_telfairi
ENSMZEG00005000987	lsm14b	60	45.041	ENSEASG00005023218	LSM14B	85	41.772	Equus_asinus_asinus
ENSMZEG00005000987	lsm14b	92	54.396	ENSECAG00000010659	LSM14B	89	50.820	Equus_caballus
ENSMZEG00005000987	lsm14b	90	53.026	ENSELUG00000016299	LSM14B	90	52.738	Esox_lucius
ENSMZEG00005000987	lsm14b	99	60.995	ENSELUG00000005780	lsm14b	99	57.592	Esox_lucius
ENSMZEG00005000987	lsm14b	92	54.396	ENSFCAG00000003248	LSM14B	89	50.820	Felis_catus
ENSMZEG00005000987	lsm14b	81	44.565	ENSFALG00000010618	LSM14B	90	41.555	Ficedula_albicollis
ENSMZEG00005000987	lsm14b	81	50.462	ENSFDAG00000002214	LSM14B	89	46.855	Fukomys_damarensis
ENSMZEG00005000987	lsm14b	72	50.182	ENSFHEG00000003362	LSM14B	69	50.182	Fundulus_heteroclitus
ENSMZEG00005000987	lsm14b	100	72.849	ENSFHEG00000006237	lsm14b	100	72.849	Fundulus_heteroclitus
ENSMZEG00005000987	lsm14b	99	66.129	ENSGMOG00000017115	lsm14b	99	62.097	Gadus_morhua
ENSMZEG00005000987	lsm14b	92	50.270	ENSGALG00000005125	LSM14B	90	48.925	Gallus_gallus
ENSMZEG00005000987	lsm14b	100	67.560	ENSGAFG00000020318	lsm14b	100	67.560	Gambusia_affinis
ENSMZEG00005000987	lsm14b	65	40.800	ENSGAFG00000013723	LSM14B	85	39.556	Gambusia_affinis
ENSMZEG00005000987	lsm14b	99	71.850	ENSGACG00000009973	lsm14b	99	72.386	Gasterosteus_aculeatus
ENSMZEG00005000987	lsm14b	55	42.727	ENSGAGG00000004106	LSM14B	80	39.631	Gopherus_agassizii
ENSMZEG00005000987	lsm14b	82	50.606	ENSGGOG00000005630	LSM14B	85	45.970	Gorilla_gorilla
ENSMZEG00005000987	lsm14b	92	53.571	ENSHGLG00000015055	LSM14B	89	50.000	Heterocephalus_glaber_female
ENSMZEG00005000987	lsm14b	81	49.689	ENSHGLG00100015273	LSM14B	89	46.372	Heterocephalus_glaber_male
ENSMZEG00005000987	lsm14b	68	55.642	ENSHCOG00000004867	lsm14b	100	53.696	Hippocampus_comes
ENSMZEG00005000987	lsm14b	94	48.760	ENSHCOG00000018747	LSM14B	90	47.826	Hippocampus_comes
ENSMZEG00005000987	lsm14b	90	59.664	ENSIPUG00000014946	lsm14b	94	60.814	Ictalurus_punctatus
ENSMZEG00005000987	lsm14b	81	50.309	ENSSTOG00000020482	LSM14B	89	47.022	Ictidomys_tridecemlineatus
ENSMZEG00005000987	lsm14b	91	53.804	ENSJJAG00000012728	Lsm14b	89	50.409	Jaculus_jaculus
ENSMZEG00005000987	lsm14b	52	35.047	ENSKMAG00000012834	-	86	42.424	Kryptolebias_marmoratus
ENSMZEG00005000987	lsm14b	100	72.432	ENSKMAG00000017524	lsm14b	100	72.432	Kryptolebias_marmoratus
ENSMZEG00005000987	lsm14b	65	41.365	ENSLBEG00000007951	LSM14B	85	36.564	Labrus_bergylta
ENSMZEG00005000987	lsm14b	91	48.010	ENSLACG00000003849	LSM14B	91	47.727	Latimeria_chalumnae
ENSMZEG00005000987	lsm14b	99	56.959	ENSLOCG00000003746	lsm14b	99	56.701	Lepisosteus_oculatus
ENSMZEG00005000987	lsm14b	82	47.289	ENSLAFG00000007492	LSM14B	89	44.345	Loxodonta_africana
ENSMZEG00005000987	lsm14b	92	54.121	ENSMFAG00000041479	LSM14B	89	50.409	Macaca_fascicularis
ENSMZEG00005000987	lsm14b	92	54.121	ENSMMUG00000014084	LSM14B	89	50.409	Macaca_mulatta
ENSMZEG00005000987	lsm14b	92	54.121	ENSMNEG00000045573	LSM14B	89	50.409	Macaca_nemestrina
ENSMZEG00005000987	lsm14b	81	50.926	ENSMLEG00000040895	LSM14B	89	46.201	Mandrillus_leucophaeus
ENSMZEG00005000987	lsm14b	100	75.668	ENSMAMG00000020539	lsm14b	100	75.668	Mastacembelus_armatus
ENSMZEG00005000987	lsm14b	95	52.473	ENSMAMG00000024124	LSM14B	89	52.199	Mastacembelus_armatus
ENSMZEG00005000987	lsm14b	91	48.199	ENSMZEG00005026001	LSM14B	93	49.153	Maylandia_zebra
ENSMZEG00005000987	lsm14b	81	47.112	ENSMGAG00000005300	LSM14B	89	45.562	Meleagris_gallopavo
ENSMZEG00005000987	lsm14b	92	53.740	ENSMAUG00000020700	Lsm14b	89	49.194	Mesocricetus_auratus
ENSMZEG00005000987	lsm14b	92	53.261	ENSMICG00000014675	LSM14B	66	73.188	Microcebus_murinus
ENSMZEG00005000987	lsm14b	92	51.206	ENSMOCG00000020600	Lsm14b	89	49.457	Microtus_ochrogaster
ENSMZEG00005000987	lsm14b	61	39.777	ENSMOCG00000005119	-	91	34.182	Microtus_ochrogaster
ENSMZEG00005000987	lsm14b	92	68.144	ENSMMOG00000020042	lsm14b	95	68.144	Mola_mola
ENSMZEG00005000987	lsm14b	90	49.419	ENSMMOG00000017321	LSM14B	89	46.418	Mola_mola
ENSMZEG00005000987	lsm14b	60	40.000	ENSMODG00000016690	LSM14B	88	37.143	Monodelphis_domestica
ENSMZEG00005000987	lsm14b	99	76.374	ENSMALG00000004783	lsm14b	96	76.860	Monopterus_albus
ENSMZEG00005000987	lsm14b	91	46.006	ENSMALG00000022251	LSM14B	89	48.864	Monopterus_albus
ENSMZEG00005000987	lsm14b	92	53.846	MGP_CAROLIEiJ_G0024770	Lsm14b	89	50.270	Mus_caroli
ENSMZEG00005000987	lsm14b	92	53.846	ENSMUSG00000039108	Lsm14b	89	50.270	Mus_musculus
ENSMZEG00005000987	lsm14b	92	54.121	MGP_PahariEiJ_G0026214	Lsm14b	89	50.541	Mus_pahari
ENSMZEG00005000987	lsm14b	92	53.846	MGP_SPRETEiJ_G0025693	Lsm14b	89	50.270	Mus_spretus
ENSMZEG00005000987	lsm14b	86	43.832	ENSMPUG00000007584	LSM14B	91	41.223	Mustela_putorius_furo
ENSMZEG00005000987	lsm14b	90	53.352	ENSMLUG00000000304	LSM14B	89	50.137	Myotis_lucifugus
ENSMZEG00005000987	lsm14b	81	50.617	ENSNLEG00000015757	LSM14B	89	45.897	Nomascus_leucogenys
ENSMZEG00005000987	lsm14b	65	72.143	ENSMEUG00000008267	-	63	73.188	Notamacropus_eugenii
ENSMZEG00005000987	lsm14b	92	53.846	ENSODEG00000004099	LSM14B	89	50.273	Octodon_degus
ENSMZEG00005000987	lsm14b	100	96.995	ENSONIG00000020318	lsm14b	100	96.995	Oreochromis_niloticus
ENSMZEG00005000987	lsm14b	72	54.851	ENSOANG00000003370	LSM14B	91	53.558	Ornithorhynchus_anatinus
ENSMZEG00005000987	lsm14b	81	50.155	ENSOCUG00000006279	LSM14B	89	46.688	Oryctolagus_cuniculus
ENSMZEG00005000987	lsm14b	100	74.324	ENSORLG00000013525	lsm14b	100	76.216	Oryzias_latipes
ENSMZEG00005000987	lsm14b	93	46.648	ENSORLG00000028353	LSM14B	91	45.977	Oryzias_latipes
ENSMZEG00005000987	lsm14b	62	34.902	ENSORLG00020018191	-	85	33.333	Oryzias_latipes_hni
ENSMZEG00005000987	lsm14b	100	74.324	ENSORLG00020020553	lsm14b	100	76.216	Oryzias_latipes_hni
ENSMZEG00005000987	lsm14b	100	74.324	ENSORLG00015016862	lsm14b	100	76.216	Oryzias_latipes_hsok
ENSMZEG00005000987	lsm14b	93	46.648	ENSORLG00015013157	LSM14B	91	45.977	Oryzias_latipes_hsok
ENSMZEG00005000987	lsm14b	100	73.784	ENSOMEG00000023917	lsm14b	100	75.676	Oryzias_melastigma
ENSMZEG00005000987	lsm14b	63	37.449	ENSOMEG00000000171	-	83	34.071	Oryzias_melastigma
ENSMZEG00005000987	lsm14b	92	47.891	ENSOGAG00000003915	LSM14B	90	45.567	Otolemur_garnettii
ENSMZEG00005000987	lsm14b	83	44.744	ENSOARG00000014706	LSM14B	88	41.304	Ovis_aries
ENSMZEG00005000987	lsm14b	82	50.606	ENSPPAG00000035799	LSM14B	85	45.970	Pan_paniscus
ENSMZEG00005000987	lsm14b	92	54.670	ENSPPRG00000009197	LSM14B	89	51.093	Panthera_pardus
ENSMZEG00005000987	lsm14b	60	44.082	ENSPTIG00000021518	LSM14B	88	40.833	Panthera_tigris_altaica
ENSMZEG00005000987	lsm14b	91	54.696	ENSPTRG00000013696	LSM14B	89	50.681	Pan_troglodytes
ENSMZEG00005000987	lsm14b	91	54.144	ENSPANG00000011747	LSM14B	89	50.136	Papio_anubis
ENSMZEG00005000987	lsm14b	91	60.857	ENSPKIG00000003275	lsm14b	85	83.696	Paramormyrops_kingsleyae
ENSMZEG00005000987	lsm14b	81	52.322	ENSPSIG00000014762	LSM14B	89	50.000	Pelodiscus_sinensis
ENSMZEG00005000987	lsm14b	91	53.591	ENSPEMG00000017688	Lsm14b	90	49.730	Peromyscus_maniculatus_bairdii
ENSMZEG00005000987	lsm14b	92	54.848	ENSPCIG00000013405	LSM14B	89	51.240	Phascolarctos_cinereus
ENSMZEG00005000987	lsm14b	100	70.620	ENSPFOG00000005631	lsm14b	100	70.620	Poecilia_formosa
ENSMZEG00005000987	lsm14b	100	70.081	ENSPLAG00000002449	lsm14b	100	70.081	Poecilia_latipinna
ENSMZEG00005000987	lsm14b	90	48.127	ENSPLAG00000005793	LSM14B	90	47.353	Poecilia_latipinna
ENSMZEG00005000987	lsm14b	100	70.889	ENSPMEG00000000745	lsm14b	100	70.889	Poecilia_mexicana
ENSMZEG00005000987	lsm14b	90	47.989	ENSPMEG00000022953	LSM14B	90	48.680	Poecilia_mexicana
ENSMZEG00005000987	lsm14b	61	38.153	ENSPREG00000007828	LSM14B	85	38.174	Poecilia_reticulata
ENSMZEG00005000987	lsm14b	92	49.864	ENSPPYG00000011194	LSM14B	89	48.333	Pongo_abelii
ENSMZEG00005000987	lsm14b	92	53.571	ENSPCOG00000013625	LSM14B	89	50.000	Propithecus_coquereli
ENSMZEG00005000987	lsm14b	90	60.458	ENSPNAG00000012777	lsm14b	90	60.458	Pygocentrus_nattereri
ENSMZEG00005000987	lsm14b	92	48.762	ENSRNOG00000054557	Lsm14b	90	45.588	Rattus_norvegicus
ENSMZEG00005000987	lsm14b	81	50.462	ENSRBIG00000033461	LSM14B	88	46.061	Rhinopithecus_bieti
ENSMZEG00005000987	lsm14b	82	51.662	ENSRROG00000042949	LSM14B	81	47.321	Rhinopithecus_roxellana
ENSMZEG00005000987	lsm14b	81	48.949	ENSSBOG00000032820	LSM14B	89	45.427	Saimiri_boliviensis_boliviensis
ENSMZEG00005000987	lsm14b	81	51.852	ENSSHAG00000015528	LSM14B	86	48.903	Sarcophilus_harrisii
ENSMZEG00005000987	lsm14b	90	62.069	ENSSFOG00015004627	lsm14b	91	62.069	Scleropages_formosus
ENSMZEG00005000987	lsm14b	100	78.723	ENSSMAG00000012725	lsm14b	100	78.780	Scophthalmus_maximus
ENSMZEG00005000987	lsm14b	97	47.692	ENSSMAG00000000135	LSM14B	91	46.322	Scophthalmus_maximus
ENSMZEG00005000987	lsm14b	100	79.521	ENSSDUG00000020977	lsm14b	100	80.053	Seriola_dumerili
ENSMZEG00005000987	lsm14b	91	52.422	ENSSDUG00000022770	LSM14B	89	52.326	Seriola_dumerili
ENSMZEG00005000987	lsm14b	61	42.292	ENSSLDG00000011354	-	87	35.581	Seriola_lalandi_dorsalis
ENSMZEG00005000987	lsm14b	51	40.376	ENSSARG00000007749	-	96	36.818	Sorex_araneus
ENSMZEG00005000987	lsm14b	92	48.387	ENSSPUG00000014360	LSM14B	96	48.588	Sphenodon_punctatus
ENSMZEG00005000987	lsm14b	100	78.804	ENSSPAG00000020915	lsm14b	100	78.533	Stegastes_partitus
ENSMZEG00005000987	lsm14b	66	38.603	ENSSPAG00000018854	-	86	32.520	Stegastes_partitus
ENSMZEG00005000987	lsm14b	91	54.039	ENSSSCG00000026052	LSM14B	88	38.489	Sus_scrofa
ENSMZEG00005000987	lsm14b	81	49.544	ENSTGUG00000007884	LSM14B	89	45.373	Taeniopygia_guttata
ENSMZEG00005000987	lsm14b	91	51.507	ENSTRUG00000001529	LSM14B	90	50.838	Takifugu_rubripes
ENSMZEG00005000987	lsm14b	100	74.124	ENSTRUG00000011354	lsm14b	100	74.124	Takifugu_rubripes
ENSMZEG00005000987	lsm14b	100	65.903	ENSTNIG00000002445	lsm14b	100	65.903	Tetraodon_nigroviridis
ENSMZEG00005000987	lsm14b	74	82.051	ENSTTRG00000011043	LSM14B	89	35.230	Tursiops_truncatus
ENSMZEG00005000987	lsm14b	90	47.753	ENSUAMG00000025298	LSM14B	89	43.889	Ursus_americanus
ENSMZEG00005000987	lsm14b	90	47.753	ENSUMAG00000000480	LSM14B	89	43.889	Ursus_maritimus
ENSMZEG00005000987	lsm14b	81	50.154	ENSVVUG00000015920	LSM14B	88	47.188	Vulpes_vulpes
ENSMZEG00005000987	lsm14b	85	53.779	ENSXETG00000001997	lsm14b	99	51.613	Xenopus_tropicalis
ENSMZEG00005000987	lsm14b	100	70.811	ENSXMAG00000010013	lsm14b	100	70.811	Xiphophorus_maculatus