EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005001453 (Gene tree)
Gene ID: 101487256
Gene Symbol: rbm25b
Alias: fi03e10|rbm25|si:ch211-105d18.5|wu:fi03e10|zgc:56208
Full Name: RNA-binding protein 25
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 13288 bases
Position: chrLG15:13752051-13765338
Accession: 101487256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005001805	RRM_1	PF00076.22	3.7e-09	1	1
ENSMZEP00005001772	RRM_1	PF00076.22	3.8e-09	1	1
ENSMZEP00005001782	RRM_1	PF00076.22	3.9e-09	1	1
ENSMZEP00005001772	PWI	PF01480.17	1.5e-13	1	1
ENSMZEP00005001805	PWI	PF01480.17	2.9e-08	1	1
ENSMZEP00005001782	PWI	PF01480.17	3.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005001877	-	3221	-	ENSMZEP00005001782	818 (aa)	-	-
ENSMZET00005001900	-	2376	-	ENSMZEP00005001805	791 (aa)	-	-
ENSMZET00005001867	-	3206	XM_012918968	ENSMZEP00005001772	813 (aa)	XP_012774422	UPI000648C343

Gene Model

Click here to download ENSMZEG00005001453's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005001453's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005001453	rbm25b	57	94.433	ENSAPOG00000015321	rbm25b	58	94.433	Acanthochromis_polyacanthus
ENSMZEG00005001453	rbm25b	55	80.131	ENSAPOG00000017757	rbm25a	57	78.481	Acanthochromis_polyacanthus
ENSMZEG00005001453	rbm25b	55	79.075	ENSACIG00000019482	rbm25a	56	76.809	Amphilophus_citrinellus
ENSMZEG00005001453	rbm25b	57	93.148	ENSACIG00000014178	rbm25b	56	92.560	Amphilophus_citrinellus
ENSMZEG00005001453	rbm25b	55	77.582	ENSAOCG00000013695	rbm25a	55	75.839	Amphiprion_ocellaris
ENSMZEG00005001453	rbm25b	55	79.176	ENSAPEG00000007514	rbm25a	57	77.311	Amphiprion_percula
ENSMZEG00005001453	rbm25b	57	78.858	ENSATEG00000020676	rbm25a	63	77.297	Anabas_testudineus
ENSMZEG00005001453	rbm25b	58	93.206	ENSATEG00000017312	rbm25b	57	93.362	Anabas_testudineus
ENSMZEG00005001453	rbm25b	54	75.339	ENSAPLG00000006643	RBM25	55	74.359	Anas_platyrhynchos
ENSMZEG00005001453	rbm25b	92	73.006	ENSACLG00000027482	rbm25a	86	74.839	Astatotilapia_calliptera
ENSMZEG00005001453	rbm25b	100	100.000	ENSACLG00000024359	rbm25b	100	100.000	Astatotilapia_calliptera
ENSMZEG00005001453	rbm25b	51	68.868	ENSAMXG00000024525	rbm25b	61	63.380	Astyanax_mexicanus
ENSMZEG00005001453	rbm25b	55	34.956	WBGene00012245	W04D2.6	86	32.983	Caenorhabditis_elegans
ENSMZEG00005001453	rbm25b	60	94.000	ENSCHOG00000008903	RBM25	60	95.652	Choloepus_hoffmanni
ENSMZEG00005001453	rbm25b	63	62.439	ENSCGRG00001020817	Rbm25	100	63.636	Cricetulus_griseus_chok1gshd
ENSMZEG00005001453	rbm25b	56	74.892	ENSCSEG00000009430	rbm25a	61	71.313	Cynoglossus_semilaevis
ENSMZEG00005001453	rbm25b	58	69.691	ENSCVAG00000005498	rbm25a	99	74.112	Cyprinodon_variegatus
ENSMZEG00005001453	rbm25b	59	87.397	ENSCVAG00000003478	rbm25b	57	88.136	Cyprinodon_variegatus
ENSMZEG00005001453	rbm25b	54	65.753	ENSDARG00000039266	rbm25a	99	93.671	Danio_rerio
ENSMZEG00005001453	rbm25b	57	65.733	ENSELUG00000021847	rbm25a	52	64.693	Esox_lucius
ENSMZEG00005001453	rbm25b	58	78.395	ENSELUG00000007730	rbm25b	59	81.200	Esox_lucius
ENSMZEG00005001453	rbm25b	56	70.259	ENSFHEG00000005318	rbm25a	57	77.823	Fundulus_heteroclitus
ENSMZEG00005001453	rbm25b	57	90.638	ENSFHEG00000003513	rbm25b	59	90.638	Fundulus_heteroclitus
ENSMZEG00005001453	rbm25b	81	70.968	ENSGMOG00000014070	rbm25a	74	78.226	Gadus_morhua
ENSMZEG00005001453	rbm25b	87	79.556	ENSGMOG00000014097	rbm25b	63	79.556	Gadus_morhua
ENSMZEG00005001453	rbm25b	98	84.502	ENSGAFG00000001092	rbm25b	52	90.871	Gambusia_affinis
ENSMZEG00005001453	rbm25b	100	71.633	ENSGAFG00000018036	rbm25a	56	73.695	Gambusia_affinis
ENSMZEG00005001453	rbm25b	55	78.242	ENSHBUG00000016908	rbm25a	57	76.744	Haplochromis_burtoni
ENSMZEG00005001453	rbm25b	100	99.631	ENSHBUG00000018499	rbm25b	100	99.631	Haplochromis_burtoni
ENSMZEG00005001453	rbm25b	100	77.845	ENSHCOG00000000142	rbm25b	57	80.795	Hippocampus_comes
ENSMZEG00005001453	rbm25b	60	71.713	ENSKMAG00000016242	rbm25a	57	76.923	Kryptolebias_marmoratus
ENSMZEG00005001453	rbm25b	56	93.450	ENSKMAG00000018826	rbm25b	57	93.362	Kryptolebias_marmoratus
ENSMZEG00005001453	rbm25b	100	89.939	ENSLBEG00000010667	rbm25b	56	86.296	Labrus_bergylta
ENSMZEG00005001453	rbm25b	53	74.943	ENSMAMG00000000165	rbm25a	60	66.531	Mastacembelus_armatus
ENSMZEG00005001453	rbm25b	55	78.242	ENSMZEG00005011183	rbm25a	57	76.744	Maylandia_zebra
ENSMZEG00005001453	rbm25b	54	75.339	ENSMGAG00000011707	RBM25	52	74.359	Meleagris_gallopavo
ENSMZEG00005001453	rbm25b	57	75.424	ENSMMOG00000009065	rbm25a	56	73.885	Mola_mola
ENSMZEG00005001453	rbm25b	100	93.668	ENSMMOG00000015545	rbm25b	63	93.118	Mola_mola
ENSMZEG00005001453	rbm25b	58	92.453	ENSMALG00000020441	rbm25b	89	92.964	Monopterus_albus
ENSMZEG00005001453	rbm25b	55	78.462	ENSNBRG00000003761	rbm25a	57	76.956	Neolamprologus_brichardi
ENSMZEG00005001453	rbm25b	100	99.495	ENSNBRG00000022192	rbm25b	100	99.495	Neolamprologus_brichardi
ENSMZEG00005001453	rbm25b	100	61.036	ENSOCUG00000013737	RBM25	86	72.187	Oryctolagus_cuniculus
ENSMZEG00005001453	rbm25b	58	87.924	ENSORLG00000011874	rbm25b	57	88.462	Oryzias_latipes
ENSMZEG00005001453	rbm25b	58	88.136	ENSORLG00020016422	rbm25b	57	88.675	Oryzias_latipes_hni
ENSMZEG00005001453	rbm25b	71	67.647	ENSORLG00015022499	rbm25a	54	64.156	Oryzias_latipes_hsok
ENSMZEG00005001453	rbm25b	58	88.136	ENSORLG00015011269	rbm25b	57	88.675	Oryzias_latipes_hsok
ENSMZEG00005001453	rbm25b	84	69.163	ENSOMEG00000022138	rbm25a	58	73.320	Oryzias_melastigma
ENSMZEG00005001453	rbm25b	57	88.889	ENSOMEG00000023172	rbm25b	57	88.889	Oryzias_melastigma
ENSMZEG00005001453	rbm25b	58	78.316	ENSPKIG00000003203	rbm25b	57	77.966	Paramormyrops_kingsleyae
ENSMZEG00005001453	rbm25b	58	88.050	ENSPMGG00000015740	rbm25b	58	86.864	Periophthalmus_magnuspinnatus
ENSMZEG00005001453	rbm25b	53	63.953	ENSPMGG00000001791	rbm25a	100	63.575	Periophthalmus_magnuspinnatus
ENSMZEG00005001453	rbm25b	57	89.792	ENSPFOG00000018808	rbm25b	58	90.437	Poecilia_formosa
ENSMZEG00005001453	rbm25b	100	63.140	ENSPFOG00000017931	rbm25a	60	69.305	Poecilia_formosa
ENSMZEG00005001453	rbm25b	100	72.673	ENSPLAG00000018338	rbm25a	56	74.423	Poecilia_latipinna
ENSMZEG00005001453	rbm25b	100	72.554	ENSPMEG00000024470	rbm25a	62	69.305	Poecilia_mexicana
ENSMZEG00005001453	rbm25b	57	89.583	ENSPMEG00000019161	rbm25b	58	90.229	Poecilia_mexicana
ENSMZEG00005001453	rbm25b	55	76.535	ENSPREG00000009228	rbm25a	57	74.419	Poecilia_reticulata
ENSMZEG00005001453	rbm25b	57	89.627	ENSPREG00000008522	rbm25b	58	90.269	Poecilia_reticulata
ENSMZEG00005001453	rbm25b	54	66.667	ENSPCAG00000006226	RBM25	79	72.961	Procavia_capensis
ENSMZEG00005001453	rbm25b	100	100.000	ENSPNYG00000023303	rbm25b	100	100.000	Pundamilia_nyererei
ENSMZEG00005001453	rbm25b	57	75.914	ENSPNYG00000022596	rbm25a	54	74.839	Pundamilia_nyererei
ENSMZEG00005001453	rbm25b	54	72.336	ENSRNOG00000002871	Rbm25l1	54	72.651	Rattus_norvegicus
ENSMZEG00005001453	rbm25b	61	79.916	ENSSBOG00000034153	RBM25	54	52.759	Saimiri_boliviensis_boliviensis
ENSMZEG00005001453	rbm25b	57	76.596	ENSSFOG00015007093	rbm25	57	76.008	Scleropages_formosus
ENSMZEG00005001453	rbm25b	57	77.215	ENSSMAG00000009745	rbm25a	58	76.371	Scophthalmus_maximus
ENSMZEG00005001453	rbm25b	58	87.891	ENSSMAG00000002520	rbm25b	58	88.110	Scophthalmus_maximus
ENSMZEG00005001453	rbm25b	55	80.525	ENSSDUG00000017984	rbm25a	58	78.858	Seriola_dumerili
ENSMZEG00005001453	rbm25b	56	95.633	ENSSLDG00000024573	rbm25b	100	95.633	Seriola_lalandi_dorsalis
ENSMZEG00005001453	rbm25b	55	80.525	ENSSLDG00000010342	rbm25a	57	78.858	Seriola_lalandi_dorsalis
ENSMZEG00005001453	rbm25b	55	77.612	ENSSPAG00000011114	rbm25a	57	76.240	Stegastes_partitus
ENSMZEG00005001453	rbm25b	57	72.939	ENSTRUG00000003076	rbm25a	60	71.459	Takifugu_rubripes
ENSMZEG00005001453	rbm25b	58	92.751	ENSTRUG00000017964	rbm25b	58	92.934	Takifugu_rubripes
ENSMZEG00005001453	rbm25b	56	79.126	ENSTBEG00000010538	-	64	79.126	Tupaia_belangeri
ENSMZEG00005001453	rbm25b	90	65.678	ENSVPAG00000009052	RBM25	78	73.391	Vicugna_pacos
ENSMZEG00005001453	rbm25b	96	58.160	ENSXETG00000021857	rbm25	56	73.987	Xenopus_tropicalis
ENSMZEG00005001453	rbm25b	100	71.445	ENSXCOG00000004043	RBM25	57	73.347	Xiphophorus_couchianus
ENSMZEG00005001453	rbm25b	100	78.144	ENSXCOG00000002222	rbm25b	56	79.493	Xiphophorus_couchianus
ENSMZEG00005001453	rbm25b	100	84.958	ENSXMAG00000017290	rbm25b	58	90.289	Xiphophorus_maculatus
ENSMZEG00005001453	rbm25b	100	65.874	ENSXMAG00000009077	RBM25	59	70.866	Xiphophorus_maculatus