EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005001680 (Gene tree)
Gene ID: 101465661
Gene Symbol: neil3
Alias: zgc:103553
Full Name: nei like DNA glycosylase 3
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 15584 bases
Position: chrLG2:5445595-5461178
Accession: 101465661
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005002130	zf-RanBP	PF00641.18	7.9e-07	1	1
ENSMZEP00005002081	zf-RanBP	PF00641.18	8.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005002181	-	3729	XM_004553628	ENSMZEP00005002081	579 (aa)	XP_004553685	UPI000D30D469
ENSMZET00005002230	-	3795	XM_004553627	ENSMZEP00005002130	581 (aa)	XP_004553684	UPI000D323237

Gene Model

Click here to download ENSMZEG00005001680's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005001680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005001680	neil3	100	51.613	ENSG00000109674	NEIL3	100	51.613	Homo_sapiens
ENSMZEG00005001680	neil3	100	87.822	ENSACIG00000002265	neil3	100	87.822	Amphilophus_citrinellus
ENSMZEG00005001680	neil3	100	80.239	ENSATEG00000004193	neil3	100	80.239	Anabas_testudineus
ENSMZEG00005001680	neil3	100	45.719	ENSANAG00000026464	NEIL3	100	45.719	Aotus_nancymaae
ENSMZEG00005001680	neil3	100	99.312	ENSACLG00000011270	neil3	100	99.312	Astatotilapia_calliptera
ENSMZEG00005001680	neil3	100	51.452	ENSBTAG00000005825	NEIL3	100	51.452	Bos_taurus
ENSMZEG00005001680	neil3	100	50.649	ENSCJAG00000005464	NEIL3	100	50.649	Callithrix_jacchus
ENSMZEG00005001680	neil3	100	51.212	ENSCHIG00000009157	NEIL3	100	51.212	Capra_hircus
ENSMZEG00005001680	neil3	100	50.997	ENSTSYG00000014680	NEIL3	100	50.997	Carlito_syrichta
ENSMZEG00005001680	neil3	88	51.336	ENSCAPG00000006333	NEIL3	98	51.336	Cavia_aperea
ENSMZEG00005001680	neil3	100	50.647	ENSCPOG00000003297	NEIL3	100	50.647	Cavia_porcellus
ENSMZEG00005001680	neil3	100	51.299	ENSCCAG00000018838	NEIL3	100	51.299	Cebus_capucinus
ENSMZEG00005001680	neil3	100	51.613	ENSCLAG00000015661	NEIL3	100	51.613	Chinchilla_lanigera
ENSMZEG00005001680	neil3	100	51.151	ENSCSAG00000003064	NEIL3	100	51.151	Chlorocebus_sabaeus
ENSMZEG00005001680	neil3	74	68.868	ENSCHOG00000008101	NEIL3	75	68.868	Choloepus_hoffmanni
ENSMZEG00005001680	neil3	100	50.656	ENSCANG00000043622	NEIL3	100	50.656	Colobus_angolensis_palliatus
ENSMZEG00005001680	neil3	100	81.443	ENSCSEG00000003828	neil3	99	81.443	Cynoglossus_semilaevis
ENSMZEG00005001680	neil3	100	60.959	ENSDARG00000020079	neil3	100	60.959	Danio_rerio
ENSMZEG00005001680	neil3	89	51.509	ENSDNOG00000012236	NEIL3	100	51.509	Dasypus_novemcinctus
ENSMZEG00005001680	neil3	100	52.512	ENSEASG00005022272	NEIL3	100	52.512	Equus_asinus_asinus
ENSMZEG00005001680	neil3	100	52.358	ENSECAG00000009121	NEIL3	100	52.358	Equus_caballus
ENSMZEG00005001680	neil3	78	44.060	ENSEEUG00000010848	NEIL3	100	44.060	Erinaceus_europaeus
ENSMZEG00005001680	neil3	100	51.400	ENSFCAG00000004956	NEIL3	100	51.400	Felis_catus
ENSMZEG00005001680	neil3	100	99.139	ENSHBUG00000023848	neil3	100	99.139	Haplochromis_burtoni
ENSMZEG00005001680	neil3	89	51.504	ENSHGLG00000006643	NEIL3	100	51.504	Heterocephalus_glaber_female
ENSMZEG00005001680	neil3	89	51.504	ENSHGLG00100006959	NEIL3	100	51.504	Heterocephalus_glaber_male
ENSMZEG00005001680	neil3	100	49.838	ENSSTOG00000016245	NEIL3	100	49.838	Ictidomys_tridecemlineatus
ENSMZEG00005001680	neil3	65	51.662	ENSLACG00000000308	NEIL3	99	51.662	Latimeria_chalumnae
ENSMZEG00005001680	neil3	100	50.656	ENSMFAG00000002547	NEIL3	100	50.656	Macaca_fascicularis
ENSMZEG00005001680	neil3	100	50.820	ENSMMUG00000007394	NEIL3	100	50.820	Macaca_mulatta
ENSMZEG00005001680	neil3	100	50.492	ENSMNEG00000036177	NEIL3	100	50.492	Macaca_nemestrina
ENSMZEG00005001680	neil3	100	84.708	ENSMAMG00000017052	neil3	100	84.708	Mastacembelus_armatus
ENSMZEG00005001680	neil3	90	46.667	ENSMODG00000003813	NEIL3	99	46.667	Monodelphis_domestica
ENSMZEG00005001680	neil3	100	50.812	MGP_CAROLIEiJ_G0031052	Neil3	100	50.812	Mus_caroli
ENSMZEG00005001680	neil3	100	50.487	ENSMUSG00000039396	Neil3	100	50.487	Mus_musculus
ENSMZEG00005001680	neil3	100	50.651	MGP_PahariEiJ_G0021518	Neil3	100	50.651	Mus_pahari
ENSMZEG00005001680	neil3	100	51.387	MGP_SPRETEiJ_G0032167	Neil3	100	51.387	Mus_spretus
ENSMZEG00005001680	neil3	100	88.985	ENSNBRG00000013229	neil3	100	88.985	Neolamprologus_brichardi
ENSMZEG00005001680	neil3	100	50.325	ENSNLEG00000016818	NEIL3	100	50.325	Nomascus_leucogenys
ENSMZEG00005001680	neil3	100	50.727	ENSODEG00000004102	NEIL3	100	50.727	Octodon_degus
ENSMZEG00005001680	neil3	100	97.762	ENSONIG00000001176	neil3	100	97.762	Oreochromis_niloticus
ENSMZEG00005001680	neil3	99	50.993	ENSOCUG00000001040	NEIL3	99	51.325	Oryctolagus_cuniculus
ENSMZEG00005001680	neil3	100	74.570	ENSOMEG00000014798	neil3	100	74.570	Oryzias_melastigma
ENSMZEG00005001680	neil3	100	48.792	ENSOGAG00000012624	NEIL3	100	48.792	Otolemur_garnettii
ENSMZEG00005001680	neil3	97	52.348	ENSOARG00000006852	NEIL3	99	53.393	Ovis_aries
ENSMZEG00005001680	neil3	100	51.290	ENSPPAG00000035318	NEIL3	100	51.290	Pan_paniscus
ENSMZEG00005001680	neil3	100	51.071	ENSPPRG00000003958	NEIL3	100	51.071	Panthera_pardus
ENSMZEG00005001680	neil3	100	51.400	ENSPTIG00000012966	NEIL3	100	51.400	Panthera_tigris_altaica
ENSMZEG00005001680	neil3	100	51.208	ENSPTRG00000016617	NEIL3	100	51.208	Pan_troglodytes
ENSMZEG00005001680	neil3	100	50.493	ENSPANG00000014727	NEIL3	100	50.669	Papio_anubis
ENSMZEG00005001680	neil3	100	81.959	ENSPFOG00000018858	neil3	100	81.959	Poecilia_formosa
ENSMZEG00005001680	neil3	100	81.787	ENSPLAG00000010685	neil3	100	81.787	Poecilia_latipinna
ENSMZEG00005001680	neil3	100	81.615	ENSPMEG00000013971	neil3	100	81.615	Poecilia_mexicana
ENSMZEG00005001680	neil3	100	78.351	ENSPREG00000009841	neil3	100	78.351	Poecilia_reticulata
ENSMZEG00005001680	neil3	69	66.981	ENSPCAG00000006386	NEIL3	78	66.981	Procavia_capensis
ENSMZEG00005001680	neil3	73	68.868	ENSPCOG00000010888	NEIL3	94	68.868	Propithecus_coquereli
ENSMZEG00005001680	neil3	99	51.071	ENSPVAG00000002255	NEIL3	99	51.071	Pteropus_vampyrus
ENSMZEG00005001680	neil3	100	95.009	ENSPNYG00000021276	neil3	100	95.009	Pundamilia_nyererei
ENSMZEG00005001680	neil3	98	55.497	ENSPNAG00000019983	neil3	100	55.846	Pygocentrus_nattereri
ENSMZEG00005001680	neil3	100	50.977	ENSRNOG00000011688	Neil3	100	50.977	Rattus_norvegicus
ENSMZEG00005001680	neil3	100	50.329	ENSRBIG00000023002	NEIL3	100	50.329	Rhinopithecus_bieti
ENSMZEG00005001680	neil3	100	50.329	ENSRROG00000000069	NEIL3	100	50.329	Rhinopithecus_roxellana
ENSMZEG00005001680	neil3	100	51.140	ENSSBOG00000032601	NEIL3	100	51.140	Saimiri_boliviensis_boliviensis
ENSMZEG00005001680	neil3	100	51.294	ENSSHAG00000007680	NEIL3	100	51.294	Sarcophilus_harrisii
ENSMZEG00005001680	neil3	100	84.021	ENSSMAG00000009621	neil3	100	84.021	Scophthalmus_maximus
ENSMZEG00005001680	neil3	100	51.792	ENSSSCG00000015771	NEIL3	100	51.792	Sus_scrofa
ENSMZEG00005001680	neil3	100	50.647	ENSTTRG00000013224	NEIL3	100	50.891	Tursiops_truncatus
ENSMZEG00005001680	neil3	100	47.249	ENSVPAG00000005020	NEIL3	100	47.249	Vicugna_pacos
ENSMZEG00005001680	neil3	92	74.248	ENSXCOG00000014831	neil3	97	74.248	Xiphophorus_couchianus
ENSMZEG00005001680	neil3	100	80.756	ENSXMAG00000028638	neil3	100	80.756	Xiphophorus_maculatus