EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005001769 (Gene tree)
Gene ID: 101466135
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 9607 bases
Position: chrLG15:14353880-14363486
Accession: 101466135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005002269	Beta-Casp	PF10996.8	6.3e-21	1	1
ENSMZEP00005002269	Lactamase_B	PF00753.27	2.7e-06	1	1
ENSMZEP00005002269	RMMBL	PF07521.12	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005002370	-	3529	XM_004550464	ENSMZEP00005002269	787 (aa)	XP_004550521	UPI000329FCF8

Gene Model

Click here to download ENSMZEG00005001769's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005001769's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005001769	cpsf2	100	85.298	ENSG00000165934	CPSF2	100	85.298	Homo_sapiens
ENSMZEG00005001769	cpsf2	100	95.553	ENSAPOG00000001242	cpsf2	100	95.553	Acanthochromis_polyacanthus
ENSMZEG00005001769	cpsf2	100	96.574	ENSACIG00000009331	cpsf2	100	96.574	Amphilophus_citrinellus
ENSMZEG00005001769	cpsf2	100	95.934	ENSAOCG00000014095	cpsf2	100	95.934	Amphiprion_ocellaris
ENSMZEG00005001769	cpsf2	100	95.934	ENSAPEG00000009158	cpsf2	100	95.934	Amphiprion_percula
ENSMZEG00005001769	cpsf2	96	93.931	ENSATEG00000017644	cpsf2	99	93.624	Anabas_testudineus
ENSMZEG00005001769	cpsf2	100	85.443	ENSAPLG00000006330	CPSF2	100	85.443	Anas_platyrhynchos
ENSMZEG00005001769	cpsf2	100	84.791	ENSACAG00000009245	CPSF2	100	84.791	Anolis_carolinensis
ENSMZEG00005001769	cpsf2	100	85.425	ENSANAG00000022915	CPSF2	100	85.425	Aotus_nancymaae
ENSMZEG00005001769	cpsf2	100	89.227	ENSAMXG00000018696	cpsf2	100	89.227	Astyanax_mexicanus
ENSMZEG00005001769	cpsf2	100	85.425	ENSBTAG00000010227	CPSF2	100	85.425	Bos_taurus
ENSMZEG00005001769	cpsf2	100	41.647	WBGene00017313	cpsf-2	100	41.784	Caenorhabditis_elegans
ENSMZEG00005001769	cpsf2	100	85.425	ENSCJAG00000018069	CPSF2	100	85.425	Callithrix_jacchus
ENSMZEG00005001769	cpsf2	100	85.298	ENSCAFG00000010909	CPSF2	100	85.298	Canis_familiaris
ENSMZEG00005001769	cpsf2	100	85.298	ENSCAFG00020020670	CPSF2	100	85.298	Canis_lupus_dingo
ENSMZEG00005001769	cpsf2	100	85.425	ENSCHIG00000023848	CPSF2	100	85.425	Capra_hircus
ENSMZEG00005001769	cpsf2	100	85.298	ENSTSYG00000009036	CPSF2	100	85.298	Carlito_syrichta
ENSMZEG00005001769	cpsf2	100	85.425	ENSCPOG00000010899	CPSF2	100	85.425	Cavia_porcellus
ENSMZEG00005001769	cpsf2	100	85.425	ENSCCAG00000028088	CPSF2	100	85.425	Cebus_capucinus
ENSMZEG00005001769	cpsf2	100	85.425	ENSCATG00000030132	CPSF2	100	85.425	Cercocebus_atys
ENSMZEG00005001769	cpsf2	100	85.425	ENSCLAG00000012404	CPSF2	100	85.425	Chinchilla_lanigera
ENSMZEG00005001769	cpsf2	100	85.425	ENSCSAG00000011300	CPSF2	100	85.425	Chlorocebus_sabaeus
ENSMZEG00005001769	cpsf2	100	79.721	ENSCHOG00000012904	CPSF2	100	79.721	Choloepus_hoffmanni
ENSMZEG00005001769	cpsf2	100	85.298	ENSCPBG00000008766	CPSF2	97	85.298	Chrysemys_picta_bellii
ENSMZEG00005001769	cpsf2	100	53.234	ENSCING00000007881	-	100	52.736	Ciona_intestinalis
ENSMZEG00005001769	cpsf2	94	85.811	ENSCANG00000041651	CPSF2	100	85.792	Colobus_angolensis_palliatus
ENSMZEG00005001769	cpsf2	100	84.918	ENSCGRG00001006901	Cpsf2	100	84.918	Cricetulus_griseus_chok1gshd
ENSMZEG00005001769	cpsf2	100	84.918	ENSCGRG00000012416	Cpsf2	100	84.918	Cricetulus_griseus_crigri
ENSMZEG00005001769	cpsf2	100	92.640	ENSCSEG00000004116	cpsf2	100	92.640	Cynoglossus_semilaevis
ENSMZEG00005001769	cpsf2	100	93.520	ENSCVAG00000000095	cpsf2	100	93.520	Cyprinodon_variegatus
ENSMZEG00005001769	cpsf2	100	88.101	ENSDARG00000028971	cpsf2	100	88.101	Danio_rerio
ENSMZEG00005001769	cpsf2	100	85.425	ENSDNOG00000042757	CPSF2	100	85.425	Dasypus_novemcinctus
ENSMZEG00005001769	cpsf2	100	85.425	ENSDORG00000013709	Cpsf2	100	85.425	Dipodomys_ordii
ENSMZEG00005001769	cpsf2	100	53.646	FBgn0027873	Cpsf100	100	53.160	Drosophila_melanogaster
ENSMZEG00005001769	cpsf2	100	77.848	ENSETEG00000012123	CPSF2	100	77.848	Echinops_telfairi
ENSMZEG00005001769	cpsf2	52	77.262	ENSEBUG00000012098	cpsf2	93	77.262	Eptatretus_burgeri
ENSMZEG00005001769	cpsf2	89	90.444	ENSEASG00005021193	CPSF2	100	90.444	Equus_asinus_asinus
ENSMZEG00005001769	cpsf2	100	85.298	ENSECAG00000023935	CPSF2	100	85.298	Equus_caballus
ENSMZEG00005001769	cpsf2	100	88.317	ENSELUG00000008442	cpsf2	100	88.317	Esox_lucius
ENSMZEG00005001769	cpsf2	100	85.298	ENSFCAG00000007886	CPSF2	100	85.298	Felis_catus
ENSMZEG00005001769	cpsf2	100	85.406	ENSFALG00000002412	CPSF2	100	85.406	Ficedula_albicollis
ENSMZEG00005001769	cpsf2	100	85.298	ENSFDAG00000006327	CPSF2	100	85.298	Fukomys_damarensis
ENSMZEG00005001769	cpsf2	96	91.612	ENSFHEG00000015465	cpsf2	98	92.267	Fundulus_heteroclitus
ENSMZEG00005001769	cpsf2	100	90.013	ENSGMOG00000008761	cpsf2	100	90.013	Gadus_morhua
ENSMZEG00005001769	cpsf2	100	86.168	ENSGALG00000010783	CPSF2	100	86.168	Gallus_gallus
ENSMZEG00005001769	cpsf2	100	93.647	ENSGAFG00000001407	cpsf2	100	93.647	Gambusia_affinis
ENSMZEG00005001769	cpsf2	100	94.663	ENSGACG00000008418	cpsf2	100	94.663	Gasterosteus_aculeatus
ENSMZEG00005001769	cpsf2	100	85.171	ENSGAGG00000008287	CPSF2	100	85.171	Gopherus_agassizii
ENSMZEG00005001769	cpsf2	100	85.298	ENSGGOG00000011799	CPSF2	100	85.298	Gorilla_gorilla
ENSMZEG00005001769	cpsf2	100	99.873	ENSHBUG00000023466	cpsf2	100	99.873	Haplochromis_burtoni
ENSMZEG00005001769	cpsf2	100	85.425	ENSHGLG00000018311	CPSF2	100	85.425	Heterocephalus_glaber_female
ENSMZEG00005001769	cpsf2	100	85.425	ENSHGLG00100016460	CPSF2	100	85.425	Heterocephalus_glaber_male
ENSMZEG00005001769	cpsf2	100	92.503	ENSHCOG00000019527	cpsf2	98	92.503	Hippocampus_comes
ENSMZEG00005001769	cpsf2	100	89.987	ENSIPUG00000020857	cpsf2	100	89.987	Ictalurus_punctatus
ENSMZEG00005001769	cpsf2	100	85.425	ENSSTOG00000009528	CPSF2	100	85.425	Ictidomys_tridecemlineatus
ENSMZEG00005001769	cpsf2	100	85.171	ENSJJAG00000017925	Cpsf2	100	85.171	Jaculus_jaculus
ENSMZEG00005001769	cpsf2	100	92.884	ENSKMAG00000019429	cpsf2	100	92.884	Kryptolebias_marmoratus
ENSMZEG00005001769	cpsf2	95	93.557	ENSLBEG00000011585	cpsf2	99	93.557	Labrus_bergylta
ENSMZEG00005001769	cpsf2	100	84.137	ENSLACG00000019024	CPSF2	100	84.284	Latimeria_chalumnae
ENSMZEG00005001769	cpsf2	100	88.748	ENSLOCG00000014102	cpsf2	100	88.748	Lepisosteus_oculatus
ENSMZEG00005001769	cpsf2	100	85.082	ENSLAFG00000004891	CPSF2	100	85.082	Loxodonta_africana
ENSMZEG00005001769	cpsf2	100	85.425	ENSMFAG00000041212	CPSF2	100	85.425	Macaca_fascicularis
ENSMZEG00005001769	cpsf2	100	85.425	ENSMMUG00000000699	CPSF2	100	85.425	Macaca_mulatta
ENSMZEG00005001769	cpsf2	100	85.425	ENSMNEG00000031584	CPSF2	100	85.425	Macaca_nemestrina
ENSMZEG00005001769	cpsf2	100	85.425	ENSMLEG00000029394	CPSF2	100	85.425	Mandrillus_leucophaeus
ENSMZEG00005001769	cpsf2	100	95.044	ENSMAMG00000004235	cpsf2	100	95.044	Mastacembelus_armatus
ENSMZEG00005001769	cpsf2	100	85.932	ENSMGAG00000013122	CPSF2	100	85.932	Meleagris_gallopavo
ENSMZEG00005001769	cpsf2	100	84.918	ENSMAUG00000015160	Cpsf2	100	84.918	Mesocricetus_auratus
ENSMZEG00005001769	cpsf2	100	85.425	ENSMICG00000016441	CPSF2	100	85.425	Microcebus_murinus
ENSMZEG00005001769	cpsf2	100	84.918	ENSMOCG00000015372	Cpsf2	100	84.918	Microtus_ochrogaster
ENSMZEG00005001769	cpsf2	100	87.802	ENSMMOG00000015590	cpsf2	100	87.929	Mola_mola
ENSMZEG00005001769	cpsf2	100	85.425	ENSMODG00000002042	CPSF2	100	85.425	Monodelphis_domestica
ENSMZEG00005001769	cpsf2	100	91.233	ENSMALG00000022275	cpsf2	100	91.233	Monopterus_albus
ENSMZEG00005001769	cpsf2	100	85.044	ENSMUSG00000041781	Cpsf2	100	85.044	Mus_musculus
ENSMZEG00005001769	cpsf2	100	84.918	MGP_PahariEiJ_G0029791	Cpsf2	100	84.918	Mus_pahari
ENSMZEG00005001769	cpsf2	100	85.044	MGP_SPRETEiJ_G0018877	Cpsf2	100	85.044	Mus_spretus
ENSMZEG00005001769	cpsf2	100	85.551	ENSMPUG00000007617	CPSF2	98	85.551	Mustela_putorius_furo
ENSMZEG00005001769	cpsf2	100	85.298	ENSMLUG00000005570	CPSF2	100	85.298	Myotis_lucifugus
ENSMZEG00005001769	cpsf2	100	85.171	ENSNGAG00000020312	Cpsf2	100	85.171	Nannospalax_galili
ENSMZEG00005001769	cpsf2	100	99.492	ENSNBRG00000022402	cpsf2	100	99.492	Neolamprologus_brichardi
ENSMZEG00005001769	cpsf2	100	84.537	ENSNLEG00000017132	CPSF2	100	84.537	Nomascus_leucogenys
ENSMZEG00005001769	cpsf2	91	93.204	ENSMEUG00000008138	CPSF2	91	93.204	Notamacropus_eugenii
ENSMZEG00005001769	cpsf2	86	89.037	ENSOPRG00000008484	-	92	89.037	Ochotona_princeps
ENSMZEG00005001769	cpsf2	100	85.298	ENSODEG00000008682	CPSF2	100	85.298	Octodon_degus
ENSMZEG00005001769	cpsf2	100	98.348	ENSONIG00000005901	cpsf2	100	98.348	Oreochromis_niloticus
ENSMZEG00005001769	cpsf2	100	85.678	ENSOANG00000003822	CPSF2	100	85.678	Ornithorhynchus_anatinus
ENSMZEG00005001769	cpsf2	100	85.171	ENSOCUG00000005713	CPSF2	100	85.171	Oryctolagus_cuniculus
ENSMZEG00005001769	cpsf2	100	86.404	ENSORLG00000011628	cpsf2	100	86.404	Oryzias_latipes
ENSMZEG00005001769	cpsf2	100	92.122	ENSORLG00020016980	cpsf2	100	92.122	Oryzias_latipes_hni
ENSMZEG00005001769	cpsf2	100	92.122	ENSORLG00015011910	cpsf2	100	92.122	Oryzias_latipes_hsok
ENSMZEG00005001769	cpsf2	100	92.386	ENSOMEG00000022876	cpsf2	100	92.513	Oryzias_melastigma
ENSMZEG00005001769	cpsf2	100	82.427	ENSOARG00000012889	CPSF2	100	82.427	Ovis_aries
ENSMZEG00005001769	cpsf2	100	85.298	ENSPPAG00000039666	CPSF2	100	85.298	Pan_paniscus
ENSMZEG00005001769	cpsf2	99	85.279	ENSPPRG00000010869	CPSF2	100	85.279	Panthera_pardus
ENSMZEG00005001769	cpsf2	100	85.298	ENSPTIG00000021202	CPSF2	100	85.298	Panthera_tigris_altaica
ENSMZEG00005001769	cpsf2	100	85.298	ENSPTRG00000006651	CPSF2	100	85.298	Pan_troglodytes
ENSMZEG00005001769	cpsf2	100	85.425	ENSPANG00000017417	CPSF2	100	85.425	Papio_anubis
ENSMZEG00005001769	cpsf2	100	84.664	ENSPKIG00000021453	cpsf2	100	84.664	Paramormyrops_kingsleyae
ENSMZEG00005001769	cpsf2	100	84.791	ENSPSIG00000006289	CPSF2	100	84.791	Pelodiscus_sinensis
ENSMZEG00005001769	cpsf2	76	87.354	ENSPMGG00000002511	cpsf2	99	88.167	Periophthalmus_magnuspinnatus
ENSMZEG00005001769	cpsf2	100	85.044	ENSPEMG00000007917	Cpsf2	100	85.044	Peromyscus_maniculatus_bairdii
ENSMZEG00005001769	cpsf2	100	72.773	ENSPMAG00000006205	cpsf2	100	72.773	Petromyzon_marinus
ENSMZEG00005001769	cpsf2	100	85.425	ENSPCIG00000011393	CPSF2	100	85.425	Phascolarctos_cinereus
ENSMZEG00005001769	cpsf2	100	93.647	ENSPFOG00000018648	cpsf2	100	93.647	Poecilia_formosa
ENSMZEG00005001769	cpsf2	100	93.647	ENSPLAG00000019199	cpsf2	99	93.647	Poecilia_latipinna
ENSMZEG00005001769	cpsf2	96	93.659	ENSPMEG00000012100	cpsf2	99	93.557	Poecilia_mexicana
ENSMZEG00005001769	cpsf2	100	93.266	ENSPREG00000008960	cpsf2	100	93.266	Poecilia_reticulata
ENSMZEG00005001769	cpsf2	64	81.113	ENSPPYG00000029685	-	100	81.113	Pongo_abelii
ENSMZEG00005001769	cpsf2	100	85.298	ENSPCAG00000012477	CPSF2	100	85.298	Procavia_capensis
ENSMZEG00005001769	cpsf2	100	85.551	ENSPCOG00000026387	CPSF2	100	85.551	Propithecus_coquereli
ENSMZEG00005001769	cpsf2	64	91.327	ENSPVAG00000004223	CPSF2	65	91.327	Pteropus_vampyrus
ENSMZEG00005001769	cpsf2	100	99.365	ENSPNYG00000023356	cpsf2	100	99.365	Pundamilia_nyererei
ENSMZEG00005001769	cpsf2	100	90.494	ENSPNAG00000001849	cpsf2	100	90.494	Pygocentrus_nattereri
ENSMZEG00005001769	cpsf2	100	85.044	ENSRNOG00000005733	Cpsf2	100	85.044	Rattus_norvegicus
ENSMZEG00005001769	cpsf2	100	85.425	ENSRBIG00000044792	CPSF2	100	85.425	Rhinopithecus_bieti
ENSMZEG00005001769	cpsf2	100	85.425	ENSRROG00000034875	CPSF2	100	85.425	Rhinopithecus_roxellana
ENSMZEG00005001769	cpsf2	100	85.425	ENSSBOG00000024571	CPSF2	100	85.425	Saimiri_boliviensis_boliviensis
ENSMZEG00005001769	cpsf2	100	85.425	ENSSHAG00000010458	CPSF2	100	85.425	Sarcophilus_harrisii
ENSMZEG00005001769	cpsf2	100	90.748	ENSSFOG00015002117	cpsf2	100	91.001	Scleropages_formosus
ENSMZEG00005001769	cpsf2	100	93.147	ENSSMAG00000002001	cpsf2	100	93.909	Scophthalmus_maximus
ENSMZEG00005001769	cpsf2	100	95.426	ENSSDUG00000004084	cpsf2	100	95.426	Seriola_dumerili
ENSMZEG00005001769	cpsf2	100	95.044	ENSSLDG00000024330	cpsf2	100	95.044	Seriola_lalandi_dorsalis
ENSMZEG00005001769	cpsf2	58	95.050	ENSSARG00000009784	-	63	95.050	Sorex_araneus
ENSMZEG00005001769	cpsf2	100	85.044	ENSSPUG00000013485	CPSF2	100	85.044	Sphenodon_punctatus
ENSMZEG00005001769	cpsf2	100	95.172	ENSSPAG00000013284	cpsf2	100	95.172	Stegastes_partitus
ENSMZEG00005001769	cpsf2	100	85.171	ENSSSCG00000002447	CPSF2	100	85.171	Sus_scrofa
ENSMZEG00005001769	cpsf2	100	85.533	ENSTGUG00000012571	-	100	85.533	Taeniopygia_guttata
ENSMZEG00005001769	cpsf2	100	92.376	ENSTRUG00000003742	cpsf2	100	92.376	Takifugu_rubripes
ENSMZEG00005001769	cpsf2	100	91.128	ENSTNIG00000012228	cpsf2	100	92.142	Tetraodon_nigroviridis
ENSMZEG00005001769	cpsf2	91	83.478	ENSTBEG00000004530	CPSF2	94	83.478	Tupaia_belangeri
ENSMZEG00005001769	cpsf2	88	84.000	ENSTTRG00000008697	CPSF2	88	84.000	Tursiops_truncatus
ENSMZEG00005001769	cpsf2	100	85.425	ENSUAMG00000028071	CPSF2	100	85.425	Ursus_americanus
ENSMZEG00005001769	cpsf2	100	85.425	ENSUMAG00000005029	CPSF2	99	90.338	Ursus_maritimus
ENSMZEG00005001769	cpsf2	99	85.279	ENSVPAG00000003503	CPSF2	100	85.279	Vicugna_pacos
ENSMZEG00005001769	cpsf2	100	85.298	ENSVVUG00000024642	CPSF2	100	85.298	Vulpes_vulpes
ENSMZEG00005001769	cpsf2	100	84.284	ENSXETG00000010289	cpsf2	100	84.284	Xenopus_tropicalis
ENSMZEG00005001769	cpsf2	100	93.266	ENSXCOG00000001764	cpsf2	100	93.266	Xiphophorus_couchianus
ENSMZEG00005001769	cpsf2	100	93.901	ENSXMAG00000017048	cpsf2	100	93.901	Xiphophorus_maculatus