EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005002081 (Gene tree)
Gene ID: 101473432
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 10901 bases
Position: chrLG4:28643193-28654093
Accession: 101473432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005002630	MMR_HSR1	PF01926.23	4.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005002756	-	639	-	ENSMZEP00005002641	212 (aa)	-	-
ENSMZET00005002744	-	4516	XM_004556425	ENSMZEP00005002630	209 (aa)	XP_004556482	UPI000D305C0A
ENSMZET00005002760	-	4790	XM_004556423	ENSMZEP00005002644	224 (aa)	XP_004556480	UPI000D313B69
ENSMZET00005002767	-	4665	XM_004556424	ENSMZEP00005002652	218 (aa)	XP_004556481	UPI000D30EC8E

Gene Model

Click here to download ENSMZEG00005002081's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005002081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005002081	si:dkey-16l2.16	100	94.258	ENSAPOG00000008263	si:dkey-16l2.16	100	94.258	Acanthochromis_polyacanthus
ENSMZEG00005002081	si:dkey-16l2.16	100	95.694	ENSAOCG00000016825	si:dkey-16l2.16	100	95.694	Amphiprion_ocellaris
ENSMZEG00005002081	si:dkey-16l2.16	100	95.694	ENSAPEG00000006500	si:dkey-16l2.16	100	95.694	Amphiprion_percula
ENSMZEG00005002081	si:dkey-16l2.16	100	94.258	ENSATEG00000019238	si:dkey-16l2.16	100	94.258	Anabas_testudineus
ENSMZEG00005002081	si:dkey-16l2.16	100	100.000	ENSACLG00000018721	si:dkey-16l2.16	100	100.000	Astatotilapia_calliptera
ENSMZEG00005002081	si:dkey-16l2.16	100	94.737	ENSAMXG00000038243	si:dkey-16l2.16	100	94.737	Astyanax_mexicanus
ENSMZEG00005002081	si:dkey-16l2.16	56	97.458	ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	Cynoglossus_semilaevis
ENSMZEG00005002081	si:dkey-16l2.16	100	94.258	ENSCVAG00000003537	si:dkey-16l2.16	100	94.258	Cyprinodon_variegatus
ENSMZEG00005002081	si:dkey-16l2.16	100	92.823	ENSDARG00000037967	si:dkey-16l2.16	99	98.305	Danio_rerio
ENSMZEG00005002081	si:dkey-16l2.16	99	87.500	ENSELUG00000023247	si:dkey-16l2.16	99	86.538	Esox_lucius
ENSMZEG00005002081	si:dkey-16l2.16	58	94.215	ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	Fundulus_heteroclitus
ENSMZEG00005002081	si:dkey-16l2.16	77	85.714	ENSGMOG00000015174	si:dkey-16l2.16	98	85.714	Gadus_morhua
ENSMZEG00005002081	si:dkey-16l2.16	100	88.038	ENSGAFG00000005388	si:dkey-16l2.16	100	88.038	Gambusia_affinis
ENSMZEG00005002081	si:dkey-16l2.16	100	94.737	ENSGACG00000014915	si:dkey-16l2.16	98	94.737	Gasterosteus_aculeatus
ENSMZEG00005002081	si:dkey-16l2.16	100	99.522	ENSHBUG00000019261	si:dkey-16l2.16	100	99.522	Haplochromis_burtoni
ENSMZEG00005002081	si:dkey-16l2.16	100	93.301	ENSHCOG00000006538	si:dkey-16l2.16	100	93.301	Hippocampus_comes
ENSMZEG00005002081	si:dkey-16l2.16	100	90.431	ENSKMAG00000003494	si:dkey-16l2.16	100	90.431	Kryptolebias_marmoratus
ENSMZEG00005002081	si:dkey-16l2.16	100	95.215	ENSLBEG00000007681	si:dkey-16l2.16	100	95.215	Labrus_bergylta
ENSMZEG00005002081	si:dkey-16l2.16	100	93.780	ENSMAMG00000019230	si:dkey-16l2.16	100	93.780	Mastacembelus_armatus
ENSMZEG00005002081	si:dkey-16l2.16	99	95.146	ENSMMOG00000020140	si:dkey-16l2.16	97	95.146	Mola_mola
ENSMZEG00005002081	si:dkey-16l2.16	100	93.301	ENSMALG00000014727	si:dkey-16l2.16	99	93.301	Monopterus_albus
ENSMZEG00005002081	si:dkey-16l2.16	100	98.565	ENSNBRG00000008930	si:dkey-16l2.16	100	98.565	Neolamprologus_brichardi
ENSMZEG00005002081	si:dkey-16l2.16	100	99.043	ENSONIG00000009443	si:dkey-16l2.16	100	99.043	Oreochromis_niloticus
ENSMZEG00005002081	si:dkey-16l2.16	100	88.995	ENSORLG00000001098	si:dkey-16l2.16	99	88.995	Oryzias_latipes
ENSMZEG00005002081	si:dkey-16l2.16	100	88.995	ENSORLG00020000867	si:dkey-16l2.16	99	88.995	Oryzias_latipes_hni
ENSMZEG00005002081	si:dkey-16l2.16	100	88.038	ENSOMEG00000015474	si:dkey-16l2.16	100	87.560	Oryzias_melastigma
ENSMZEG00005002081	si:dkey-16l2.16	100	94.737	ENSPKIG00000005686	-	100	94.737	Paramormyrops_kingsleyae
ENSMZEG00005002081	si:dkey-16l2.16	100	79.426	ENSPKIG00000018888	si:dkey-16l2.16	94	82.143	Paramormyrops_kingsleyae
ENSMZEG00005002081	si:dkey-16l2.16	100	93.301	ENSPMGG00000000751	si:dkey-16l2.16	100	93.301	Periophthalmus_magnuspinnatus
ENSMZEG00005002081	si:dkey-16l2.16	100	88.995	ENSPFOG00000004746	si:dkey-16l2.16	100	88.995	Poecilia_formosa
ENSMZEG00005002081	si:dkey-16l2.16	100	88.517	ENSPLAG00000021043	si:dkey-16l2.16	100	88.517	Poecilia_latipinna
ENSMZEG00005002081	si:dkey-16l2.16	100	88.995	ENSPMEG00000007165	si:dkey-16l2.16	100	88.995	Poecilia_mexicana
ENSMZEG00005002081	si:dkey-16l2.16	100	88.517	ENSPREG00000005323	si:dkey-16l2.16	100	88.517	Poecilia_reticulata
ENSMZEG00005002081	si:dkey-16l2.16	100	99.522	ENSPNYG00000009490	si:dkey-16l2.16	100	99.522	Pundamilia_nyererei
ENSMZEG00005002081	si:dkey-16l2.16	100	95.215	ENSPNAG00000018986	si:dkey-16l2.16	100	95.215	Pygocentrus_nattereri
ENSMZEG00005002081	si:dkey-16l2.16	100	92.823	ENSSFOG00015021448	-	100	92.823	Scleropages_formosus
ENSMZEG00005002081	si:dkey-16l2.16	99	81.731	ENSSFOG00015006414	-	85	84.746	Scleropages_formosus
ENSMZEG00005002081	si:dkey-16l2.16	100	90.909	ENSSMAG00000011769	si:dkey-16l2.16	94	90.909	Scophthalmus_maximus
ENSMZEG00005002081	si:dkey-16l2.16	100	95.694	ENSSDUG00000005719	si:dkey-16l2.16	100	95.694	Seriola_dumerili
ENSMZEG00005002081	si:dkey-16l2.16	100	95.694	ENSSLDG00000003631	si:dkey-16l2.16	100	95.694	Seriola_lalandi_dorsalis
ENSMZEG00005002081	si:dkey-16l2.16	100	95.694	ENSSPAG00000006302	si:dkey-16l2.16	100	95.694	Stegastes_partitus
ENSMZEG00005002081	si:dkey-16l2.16	100	93.780	ENSTRUG00000025076	si:dkey-16l2.16	100	93.780	Takifugu_rubripes
ENSMZEG00005002081	si:dkey-16l2.16	100	93.780	ENSTNIG00000011300	si:dkey-16l2.16	100	93.780	Tetraodon_nigroviridis
ENSMZEG00005002081	si:dkey-16l2.16	100	88.517	ENSXMAG00000021767	si:dkey-16l2.16	100	88.517	Xiphophorus_maculatus