EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005002186 (Gene tree)
Gene ID: 101471233
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 4909 bases
Position: chrLG1:22548556-22553464
Accession: 101471233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005002790	RRM_1	PF00076.22	1.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005002906	PABPN1L-201	3016	XM_004543297	ENSMZEP00005002790	261 (aa)	XP_004543354	UPI00032A166F

Gene Model

Click here to download ENSMZEG00005002186's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005002186's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005002186	PABPN1L	71	50.746	ENSG00000205022	PABPN1L	72	50.249	Homo_sapiens
ENSMZEG00005002186	PABPN1L	91	92.083	ENSAPOG00000000685	PABPN1L	78	91.667	Acanthochromis_polyacanthus
ENSMZEG00005002186	PABPN1L	91	93.671	ENSACIG00000021400	PABPN1L	98	93.671	Amphilophus_citrinellus
ENSMZEG00005002186	PABPN1L	100	93.536	ENSAOCG00000019844	PABPN1L	100	92.395	Amphiprion_ocellaris
ENSMZEG00005002186	PABPN1L	100	93.156	ENSAPEG00000019534	PABPN1L	100	92.015	Amphiprion_percula
ENSMZEG00005002186	PABPN1L	93	89.754	ENSATEG00000011646	PABPN1L	98	89.344	Anabas_testudineus
ENSMZEG00005002186	PABPN1L	66	57.225	ENSACAG00000013250	PABPN1L	89	57.225	Anolis_carolinensis
ENSMZEG00005002186	PABPN1L	75	52.500	ENSANAG00000038178	PABPN1L	75	49.515	Aotus_nancymaae
ENSMZEG00005002186	PABPN1L	100	100.000	ENSACLG00000025147	PABPN1L	100	100.000	Astatotilapia_calliptera
ENSMZEG00005002186	PABPN1L	55	72.727	ENSAMXG00000010873	PABPN1L	54	74.648	Astyanax_mexicanus
ENSMZEG00005002186	PABPN1L	71	54.315	ENSCJAG00000045284	PABPN1L	72	53.500	Callithrix_jacchus
ENSMZEG00005002186	PABPN1L	70	48.936	ENSCAPG00000007240	PABPN1L	55	55.484	Cavia_aperea
ENSMZEG00005002186	PABPN1L	71	47.644	ENSCPOG00000025951	PABPN1L	73	46.269	Cavia_porcellus
ENSMZEG00005002186	PABPN1L	75	53.695	ENSCCAG00000027631	PABPN1L	70	52.736	Cebus_capucinus
ENSMZEG00005002186	PABPN1L	71	51.485	ENSCATG00000031060	PABPN1L	73	51.244	Cercocebus_atys
ENSMZEG00005002186	PABPN1L	58	50.955	ENSCLAG00000000704	PABPN1L	76	45.238	Chinchilla_lanigera
ENSMZEG00005002186	PABPN1L	71	49.309	ENSCSAG00000002881	PABPN1L	51	59.333	Chlorocebus_sabaeus
ENSMZEG00005002186	PABPN1L	71	49.261	ENSCANG00000039336	PABPN1L	56	56.410	Colobus_angolensis_palliatus
ENSMZEG00005002186	PABPN1L	72	48.768	ENSCGRG00001013211	Pabpn1l	78	45.116	Cricetulus_griseus_chok1gshd
ENSMZEG00005002186	PABPN1L	72	48.768	ENSCGRG00000015868	Pabpn1l	78	45.116	Cricetulus_griseus_crigri
ENSMZEG00005002186	PABPN1L	100	84.351	ENSCSEG00000001142	pabpn1l	100	84.351	Cynoglossus_semilaevis
ENSMZEG00005002186	PABPN1L	100	87.452	ENSCVAG00000015547	PABPN1L	100	86.692	Cyprinodon_variegatus
ENSMZEG00005002186	PABPN1L	66	51.163	ENSDNOG00000034677	PABPN1L	50	60.000	Dasypus_novemcinctus
ENSMZEG00005002186	PABPN1L	72	49.746	ENSEASG00005000777	PABPN1L	71	48.205	Equus_asinus_asinus
ENSMZEG00005002186	PABPN1L	72	48.718	ENSECAG00000000378	PABPN1L	71	49.239	Equus_caballus
ENSMZEG00005002186	PABPN1L	96	65.873	ENSELUG00000018385	PABPN1L	99	65.900	Esox_lucius
ENSMZEG00005002186	PABPN1L	62	52.047	ENSFCAG00000010465	PABPN1L	73	48.276	Felis_catus
ENSMZEG00005002186	PABPN1L	61	61.635	ENSFALG00000003319	PABPN1L	65	58.491	Ficedula_albicollis
ENSMZEG00005002186	PABPN1L	58	54.140	ENSFDAG00000021067	PABPN1L	62	51.479	Fukomys_damarensis
ENSMZEG00005002186	PABPN1L	100	88.550	ENSFHEG00000018295	PABPN1L	100	85.878	Fundulus_heteroclitus
ENSMZEG00005002186	PABPN1L	100	75.188	ENSGMOG00000001475	PABPN1L	100	75.188	Gadus_morhua
ENSMZEG00005002186	PABPN1L	55	61.538	ENSGALG00000006242	PABPN1L	73	61.538	Gallus_gallus
ENSMZEG00005002186	PABPN1L	100	87.833	ENSGAFG00000012565	PABPN1L	100	87.072	Gambusia_affinis
ENSMZEG00005002186	PABPN1L	100	85.393	ENSGACG00000015428	PABPN1L	100	85.393	Gasterosteus_aculeatus
ENSMZEG00005002186	PABPN1L	57	66.443	ENSGAGG00000010613	PABPN1L	50	62.416	Gopherus_agassizii
ENSMZEG00005002186	PABPN1L	71	50.990	ENSGGOG00000012670	PABPN1L	73	50.495	Gorilla_gorilla
ENSMZEG00005002186	PABPN1L	100	99.618	ENSHBUG00000002388	PABPN1L	100	99.618	Haplochromis_burtoni
ENSMZEG00005002186	PABPN1L	71	47.716	ENSHGLG00000014207	PABPN1L	55	56.164	Heterocephalus_glaber_female
ENSMZEG00005002186	PABPN1L	71	47.716	ENSHGLG00100005230	PABPN1L	55	56.164	Heterocephalus_glaber_male
ENSMZEG00005002186	PABPN1L	100	84.701	ENSHCOG00000004151	PABPN1L	99	85.075	Hippocampus_comes
ENSMZEG00005002186	PABPN1L	66	66.474	ENSIPUG00000023583	PABPN1L	87	68.208	Ictalurus_punctatus
ENSMZEG00005002186	PABPN1L	73	49.485	ENSJJAG00000006433	Pabpn1l	73	46.569	Jaculus_jaculus
ENSMZEG00005002186	PABPN1L	82	89.302	ENSKMAG00000001112	PABPN1L	94	90.141	Kryptolebias_marmoratus
ENSMZEG00005002186	PABPN1L	100	85.283	ENSLBEG00000011647	PABPN1L	97	88.679	Labrus_bergylta
ENSMZEG00005002186	PABPN1L	66	49.457	ENSLAFG00000025902	-	56	58.993	Loxodonta_africana
ENSMZEG00005002186	PABPN1L	71	51.741	ENSMFAG00000002924	PABPN1L	73	51.244	Macaca_fascicularis
ENSMZEG00005002186	PABPN1L	71	52.000	ENSMMUG00000012438	PABPN1L	73	51.500	Macaca_mulatta
ENSMZEG00005002186	PABPN1L	71	51.485	ENSMNEG00000044808	PABPN1L	73	51.244	Macaca_nemestrina
ENSMZEG00005002186	PABPN1L	71	50.746	ENSMLEG00000032667	PABPN1L	73	50.249	Mandrillus_leucophaeus
ENSMZEG00005002186	PABPN1L	73	47.980	ENSMAUG00000014032	Pabpn1l	55	53.020	Mesocricetus_auratus
ENSMZEG00005002186	PABPN1L	71	47.783	ENSMICG00000028179	PABPN1L	73	47.264	Microcebus_murinus
ENSMZEG00005002186	PABPN1L	72	44.949	ENSMOCG00000007955	Pabpn1l	57	50.980	Microtus_ochrogaster
ENSMZEG00005002186	PABPN1L	76	91.960	ENSMMOG00000017714	PABPN1L	86	91.960	Mola_mola
ENSMZEG00005002186	PABPN1L	100	89.313	ENSMALG00000016926	PABPN1L	100	88.550	Monopterus_albus
ENSMZEG00005002186	PABPN1L	68	44.928	MGP_CAROLIEiJ_G0031670	Pabpn1l	57	49.359	Mus_caroli
ENSMZEG00005002186	PABPN1L	76	45.755	ENSMUSG00000069867	Pabpn1l	58	50.617	Mus_musculus
ENSMZEG00005002186	PABPN1L	68	46.377	MGP_PahariEiJ_G0023268	Pabpn1l	57	51.282	Mus_pahari
ENSMZEG00005002186	PABPN1L	76	46.190	MGP_SPRETEiJ_G0032788	Pabpn1l	58	50.617	Mus_spretus
ENSMZEG00005002186	PABPN1L	76	43.602	ENSNGAG00000023992	Pabpn1l	53	54.110	Nannospalax_galili
ENSMZEG00005002186	PABPN1L	90	99.578	ENSNBRG00000017078	PABPN1L	100	99.578	Neolamprologus_brichardi
ENSMZEG00005002186	PABPN1L	70	50.980	ENSOPRG00000005597	PABPN1L	75	48.792	Ochotona_princeps
ENSMZEG00005002186	PABPN1L	72	53.723	ENSOANG00000013901	PABPN1L	70	53.646	Ornithorhynchus_anatinus
ENSMZEG00005002186	PABPN1L	100	82.824	ENSORLG00000026560	PABPN1L	100	82.061	Oryzias_latipes
ENSMZEG00005002186	PABPN1L	100	82.443	ENSORLG00020015068	PABPN1L	100	81.679	Oryzias_latipes_hni
ENSMZEG00005002186	PABPN1L	100	82.824	ENSORLG00015000397	PABPN1L	100	82.061	Oryzias_latipes_hsok
ENSMZEG00005002186	PABPN1L	100	80.608	ENSOMEG00000017896	PABPN1L	72	79.087	Oryzias_melastigma
ENSMZEG00005002186	PABPN1L	54	56.376	ENSOARG00000013682	PABPN1L	51	54.140	Ovis_aries
ENSMZEG00005002186	PABPN1L	71	51.244	ENSPPAG00000028866	PABPN1L	72	50.000	Pan_paniscus
ENSMZEG00005002186	PABPN1L	62	51.176	ENSPPRG00000015106	PABPN1L	73	47.783	Panthera_pardus
ENSMZEG00005002186	PABPN1L	62	52.761	ENSPTIG00000015606	PABPN1L	63	52.147	Panthera_tigris_altaica
ENSMZEG00005002186	PABPN1L	71	51.244	ENSPTRG00000031120	PABPN1L	72	50.000	Pan_troglodytes
ENSMZEG00005002186	PABPN1L	71	50.990	ENSPANG00000026039	PABPN1L	72	50.500	Papio_anubis
ENSMZEG00005002186	PABPN1L	61	64.596	ENSPSIG00000003404	PABPN1L	82	62.346	Pelodiscus_sinensis
ENSMZEG00005002186	PABPN1L	82	87.324	ENSPMGG00000013927	PABPN1L	94	87.324	Periophthalmus_magnuspinnatus
ENSMZEG00005002186	PABPN1L	72	45.894	ENSPEMG00000016624	Pabpn1l	55	55.128	Peromyscus_maniculatus_bairdii
ENSMZEG00005002186	PABPN1L	51	61.940	ENSPCIG00000007038	-	91	61.940	Phascolarctos_cinereus
ENSMZEG00005002186	PABPN1L	100	88.213	ENSPFOG00000007001	PABPN1L	100	87.452	Poecilia_formosa
ENSMZEG00005002186	PABPN1L	100	88.213	ENSPLAG00000018431	PABPN1L	100	87.452	Poecilia_latipinna
ENSMZEG00005002186	PABPN1L	100	88.213	ENSPMEG00000009108	PABPN1L	100	87.452	Poecilia_mexicana
ENSMZEG00005002186	PABPN1L	67	86.517	ENSPMEG00000000169	-	91	84.239	Poecilia_mexicana
ENSMZEG00005002186	PABPN1L	83	91.204	ENSPREG00000022533	PABPN1L	92	91.549	Poecilia_reticulata
ENSMZEG00005002186	PABPN1L	73	52.551	ENSPPYG00000007655	PABPN1L	72	50.249	Pongo_abelii
ENSMZEG00005002186	PABPN1L	71	48.276	ENSPCOG00000024077	PABPN1L	54	56.667	Propithecus_coquereli
ENSMZEG00005002186	PABPN1L	71	51.244	ENSPVAG00000002716	PABPN1L	72	49.261	Pteropus_vampyrus
ENSMZEG00005002186	PABPN1L	100	100.000	ENSPNYG00000004803	PABPN1L	100	100.000	Pundamilia_nyererei
ENSMZEG00005002186	PABPN1L	72	47.236	ENSRNOG00000029558	Pabpn1l	54	58.621	Rattus_norvegicus
ENSMZEG00005002186	PABPN1L	71	50.495	ENSRBIG00000030740	PABPN1L	73	49.751	Rhinopithecus_bieti
ENSMZEG00005002186	PABPN1L	71	50.495	ENSRROG00000032240	-	73	49.751	Rhinopithecus_roxellana
ENSMZEG00005002186	PABPN1L	71	51.741	ENSRROG00000035483	-	73	50.746	Rhinopithecus_roxellana
ENSMZEG00005002186	PABPN1L	71	52.239	ENSSBOG00000018410	PABPN1L	72	51.256	Saimiri_boliviensis_boliviensis
ENSMZEG00005002186	PABPN1L	100	87.266	ENSSMAG00000021348	PABPN1L	100	88.390	Scophthalmus_maximus
ENSMZEG00005002186	PABPN1L	100	92.395	ENSSDUG00000006986	PABPN1L	100	91.255	Seriola_dumerili
ENSMZEG00005002186	PABPN1L	100	92.776	ENSSLDG00000021845	PABPN1L	100	91.635	Seriola_lalandi_dorsalis
ENSMZEG00005002186	PABPN1L	68	43.646	ENSSARG00000005178	-	50	57.759	Sorex_araneus
ENSMZEG00005002186	PABPN1L	100	93.536	ENSSPAG00000017978	PABPN1L	100	92.395	Stegastes_partitus
ENSMZEG00005002186	PABPN1L	78	41.232	ENSSSCG00000036367	PABPN1L	76	46.009	Sus_scrofa
ENSMZEG00005002186	PABPN1L	100	79.008	ENSTRUG00000024725	PABPN1L	100	77.863	Takifugu_rubripes
ENSMZEG00005002186	PABPN1L	74	91.667	ENSTNIG00000009416	PABPN1L	100	91.667	Tetraodon_nigroviridis
ENSMZEG00005002186	PABPN1L	65	49.432	ENSTTRG00000004691	PABPN1L	52	56.552	Tursiops_truncatus
ENSMZEG00005002186	PABPN1L	60	53.254	ENSXETG00000011258	pabpn1l	86	50.000	Xenopus_tropicalis
ENSMZEG00005002186	PABPN1L	79	91.787	ENSXCOG00000003254	PABPN1L	92	91.080	Xiphophorus_couchianus
ENSMZEG00005002186	PABPN1L	82	87.793	ENSXMAG00000029090	PABPN1L	94	87.793	Xiphophorus_maculatus