EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005002360 (Gene tree)
Gene ID: 101486265
Gene Symbol: pop4
Alias: zgc:110597
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 4845 bases
Position: chrLG1:2840622-2845466
Accession: 101486265
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005003028	UPF0086	PF01868.16	5.6e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005003144	-	2769	XM_004565695	ENSMZEP00005003028	221 (aa)	XP_004565752	UPI000D2FE8DD

Gene Model

Click here to download ENSMZEG00005002360's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG
mze03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005002360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005002360	pop4	91	61.386	ENSG00000105171	POP4	100	70.833	Homo_sapiens
ENSMZEG00005002360	pop4	92	56.190	ENSAMEG00000003172	-	93	56.190	Ailuropoda_melanoleuca
ENSMZEG00005002360	pop4	99	57.658	ENSAMEG00000018329	-	99	57.658	Ailuropoda_melanoleuca
ENSMZEG00005002360	pop4	99	85.845	ENSACIG00000008358	pop4	99	85.845	Amphilophus_citrinellus
ENSMZEG00005002360	pop4	90	80.693	ENSAOCG00000010116	pop4	98	80.693	Amphiprion_ocellaris
ENSMZEG00005002360	pop4	99	79.186	ENSAPEG00000002829	pop4	93	79.186	Amphiprion_percula
ENSMZEG00005002360	pop4	99	77.828	ENSATEG00000013028	pop4	99	77.828	Anabas_testudineus
ENSMZEG00005002360	pop4	91	60.891	ENSAPLG00000014051	POP4	98	60.891	Anas_platyrhynchos
ENSMZEG00005002360	pop4	91	62.376	ENSANAG00000020295	POP4	92	62.376	Aotus_nancymaae
ENSMZEG00005002360	pop4	100	100.000	ENSACLG00000000526	pop4	100	100.000	Astatotilapia_calliptera
ENSMZEG00005002360	pop4	97	68.224	ENSAMXG00000002899	pop4	97	68.224	Astyanax_mexicanus
ENSMZEG00005002360	pop4	92	61.275	ENSBTAG00000002223	POP4	93	61.275	Bos_taurus
ENSMZEG00005002360	pop4	91	63.054	ENSCJAG00000046750	POP4	97	67.816	Callithrix_jacchus
ENSMZEG00005002360	pop4	78	64.162	ENSCAFG00000007630	POP4	95	65.714	Canis_familiaris
ENSMZEG00005002360	pop4	88	63.077	ENSCHIG00000016743	POP4	89	63.077	Capra_hircus
ENSMZEG00005002360	pop4	93	61.650	ENSTSYG00000003488	POP4	94	61.353	Carlito_syrichta
ENSMZEG00005002360	pop4	93	43.689	ENSCAPG00000011105	POP4	92	43.689	Cavia_aperea
ENSMZEG00005002360	pop4	93	60.194	ENSCPOG00000002992	POP4	92	60.194	Cavia_porcellus
ENSMZEG00005002360	pop4	86	52.910	ENSCCAG00000034244	-	87	52.910	Cebus_capucinus
ENSMZEG00005002360	pop4	91	61.386	ENSCCAG00000020285	-	92	62.745	Cebus_capucinus
ENSMZEG00005002360	pop4	91	61.881	ENSCATG00000036022	POP4	100	71.875	Cercocebus_atys
ENSMZEG00005002360	pop4	88	62.564	ENSCLAG00000013162	POP4	89	63.452	Chinchilla_lanigera
ENSMZEG00005002360	pop4	91	61.881	ENSCSAG00000004868	POP4	93	61.881	Chlorocebus_sabaeus
ENSMZEG00005002360	pop4	88	45.641	ENSCHOG00000002071	POP4	90	45.641	Choloepus_hoffmanni
ENSMZEG00005002360	pop4	99	55.708	ENSCPBG00000016132	POP4	99	57.466	Chrysemys_picta_bellii
ENSMZEG00005002360	pop4	55	34.959	ENSCING00000023871	-	95	30.412	Ciona_intestinalis
ENSMZEG00005002360	pop4	91	61.386	ENSCANG00000005924	POP4	100	61.386	Colobus_angolensis_palliatus
ENSMZEG00005002360	pop4	91	59.406	ENSCGRG00001017185	Pop4	89	61.111	Cricetulus_griseus_chok1gshd
ENSMZEG00005002360	pop4	91	59.406	ENSCGRG00000008155	Pop4	89	61.111	Cricetulus_griseus_crigri
ENSMZEG00005002360	pop4	99	69.863	ENSCSEG00000002946	pop4	99	69.863	Cynoglossus_semilaevis
ENSMZEG00005002360	pop4	99	56.109	ENSCVAG00000018602	POP4	95	56.109	Cyprinodon_variegatus
ENSMZEG00005002360	pop4	99	67.123	ENSDARG00000101472	pop4	99	67.123	Danio_rerio
ENSMZEG00005002360	pop4	88	62.564	ENSDNOG00000047663	POP4	78	63.452	Dasypus_novemcinctus
ENSMZEG00005002360	pop4	68	59.333	ENSDORG00000008577	Pop4	87	59.333	Dipodomys_ordii
ENSMZEG00005002360	pop4	67	31.169	FBgn0035831	CG8038	75	31.169	Drosophila_melanogaster
ENSMZEG00005002360	pop4	92	51.961	ENSETEG00000003607	POP4	94	51.961	Echinops_telfairi
ENSMZEG00005002360	pop4	90	45.024	ENSEBUG00000010447	pop4	82	46.445	Eptatretus_burgeri
ENSMZEG00005002360	pop4	98	39.130	ENSEBUG00000004305	pop4	98	40.435	Eptatretus_burgeri
ENSMZEG00005002360	pop4	98	41.553	ENSEBUG00000008575	pop4	98	41.553	Eptatretus_burgeri
ENSMZEG00005002360	pop4	92	65.385	ENSECAG00000020206	POP4	76	65.385	Equus_caballus
ENSMZEG00005002360	pop4	89	44.670	ENSEEUG00000013109	POP4	99	45.729	Erinaceus_europaeus
ENSMZEG00005002360	pop4	99	68.037	ENSELUG00000019812	pop4	99	68.037	Esox_lucius
ENSMZEG00005002360	pop4	88	62.051	ENSFCAG00000001619	POP4	89	62.051	Felis_catus
ENSMZEG00005002360	pop4	96	60.377	ENSFALG00000000206	POP4	95	60.377	Ficedula_albicollis
ENSMZEG00005002360	pop4	88	62.564	ENSFDAG00000017859	POP4	89	62.564	Fukomys_damarensis
ENSMZEG00005002360	pop4	96	67.757	ENSFHEG00000012745	pop4	96	67.757	Fundulus_heteroclitus
ENSMZEG00005002360	pop4	87	70.103	ENSGMOG00000000335	pop4	96	70.103	Gadus_morhua
ENSMZEG00005002360	pop4	99	59.817	ENSGALG00000041972	POP4	92	59.817	Gallus_gallus
ENSMZEG00005002360	pop4	80	69.274	ENSGAFG00000003571	pop4	99	69.274	Gambusia_affinis
ENSMZEG00005002360	pop4	100	73.094	ENSGACG00000014510	pop4	100	77.174	Gasterosteus_aculeatus
ENSMZEG00005002360	pop4	99	56.621	ENSGAGG00000024544	POP4	79	58.371	Gopherus_agassizii
ENSMZEG00005002360	pop4	99	57.339	ENSGGOG00000038346	POP4	99	57.339	Gorilla_gorilla
ENSMZEG00005002360	pop4	100	98.190	ENSHBUG00000021821	pop4	100	98.190	Haplochromis_burtoni
ENSMZEG00005002360	pop4	88	62.564	ENSHGLG00000015798	POP4	89	62.564	Heterocephalus_glaber_female
ENSMZEG00005002360	pop4	88	62.564	ENSHGLG00100009737	POP4	89	62.564	Heterocephalus_glaber_male
ENSMZEG00005002360	pop4	100	71.041	ENSHCOG00000020937	pop4	100	71.041	Hippocampus_comes
ENSMZEG00005002360	pop4	99	63.014	ENSIPUG00000013652	pop4	99	63.014	Ictalurus_punctatus
ENSMZEG00005002360	pop4	91	60.891	ENSSTOG00000011016	POP4	92	61.765	Ictidomys_tridecemlineatus
ENSMZEG00005002360	pop4	88	62.564	ENSJJAG00000013376	Pop4	92	62.500	Jaculus_jaculus
ENSMZEG00005002360	pop4	100	78.924	ENSKMAG00000012250	pop4	100	78.924	Kryptolebias_marmoratus
ENSMZEG00005002360	pop4	100	68.161	ENSLBEG00000018846	-	100	69.058	Labrus_bergylta
ENSMZEG00005002360	pop4	100	68.610	ENSLBEG00000014139	pop4	100	69.507	Labrus_bergylta
ENSMZEG00005002360	pop4	98	57.991	ENSLACG00000008581	POP4	98	57.991	Latimeria_chalumnae
ENSMZEG00005002360	pop4	99	62.557	ENSLOCG00000005597	pop4	99	63.348	Lepisosteus_oculatus
ENSMZEG00005002360	pop4	95	60.664	ENSLAFG00000000084	POP4	95	60.664	Loxodonta_africana
ENSMZEG00005002360	pop4	91	61.881	ENSMFAG00000029606	POP4	92	61.881	Macaca_fascicularis
ENSMZEG00005002360	pop4	91	62.069	ENSMMUG00000017424	POP4	92	62.069	Macaca_mulatta
ENSMZEG00005002360	pop4	91	62.069	ENSMNEG00000031374	POP4	92	62.069	Macaca_nemestrina
ENSMZEG00005002360	pop4	91	61.881	ENSMLEG00000043454	POP4	92	63.725	Mandrillus_leucophaeus
ENSMZEG00005002360	pop4	99	79.186	ENSMAMG00000011716	pop4	99	79.186	Mastacembelus_armatus
ENSMZEG00005002360	pop4	100	58.371	ENSMGAG00000005337	POP4	99	58.371	Meleagris_gallopavo
ENSMZEG00005002360	pop4	88	62.051	ENSMAUG00000020110	Pop4	89	62.051	Mesocricetus_auratus
ENSMZEG00005002360	pop4	92	59.804	ENSMICG00000035730	POP4	91	59.804	Microcebus_murinus
ENSMZEG00005002360	pop4	99	76.712	ENSMMOG00000015321	pop4	99	77.626	Mola_mola
ENSMZEG00005002360	pop4	92	63.235	ENSMODG00000029406	POP4	88	63.235	Monodelphis_domestica
ENSMZEG00005002360	pop4	100	78.733	ENSMALG00000012571	pop4	100	78.733	Monopterus_albus
ENSMZEG00005002360	pop4	91	61.084	MGP_CAROLIEiJ_G0029600	Pop4	92	61.084	Mus_caroli
ENSMZEG00005002360	pop4	91	61.576	ENSMUSG00000030423	Pop4	92	61.576	Mus_musculus
ENSMZEG00005002360	pop4	91	60.891	MGP_SPRETEiJ_G0030699	Pop4	92	62.069	Mus_spretus
ENSMZEG00005002360	pop4	92	60.294	ENSMPUG00000008041	-	92	61.244	Mustela_putorius_furo
ENSMZEG00005002360	pop4	94	52.885	ENSMPUG00000008063	-	92	52.885	Mustela_putorius_furo
ENSMZEG00005002360	pop4	99	43.836	ENSMLUG00000010774	POP4	99	45.495	Myotis_lucifugus
ENSMZEG00005002360	pop4	57	68.000	ENSMEUG00000003636	-	100	68.000	Notamacropus_eugenii
ENSMZEG00005002360	pop4	88	63.590	ENSOPRG00000004736	POP4	98	63.590	Ochotona_princeps
ENSMZEG00005002360	pop4	88	62.051	ENSODEG00000013025	POP4	92	62.944	Octodon_degus
ENSMZEG00005002360	pop4	99	95.890	ENSONIG00000003458	pop4	97	95.890	Oreochromis_niloticus
ENSMZEG00005002360	pop4	88	63.077	ENSOCUG00000015974	POP4	89	63.077	Oryctolagus_cuniculus
ENSMZEG00005002360	pop4	99	76.471	ENSORLG00000020317	pop4	99	76.471	Oryzias_latipes
ENSMZEG00005002360	pop4	100	77.130	ENSORLG00015011624	pop4	100	77.130	Oryzias_latipes_hsok
ENSMZEG00005002360	pop4	100	75.336	ENSOMEG00000002538	pop4	100	75.336	Oryzias_melastigma
ENSMZEG00005002360	pop4	92	61.765	ENSOGAG00000011168	POP4	93	63.592	Otolemur_garnettii
ENSMZEG00005002360	pop4	88	63.077	ENSOARG00000004041	POP4	88	63.077	Ovis_aries
ENSMZEG00005002360	pop4	91	61.386	ENSPPAG00000040372	POP4	92	61.386	Pan_paniscus
ENSMZEG00005002360	pop4	88	62.051	ENSPPRG00000010502	POP4	89	62.051	Panthera_pardus
ENSMZEG00005002360	pop4	88	62.051	ENSPTIG00000016598	POP4	89	62.051	Panthera_tigris_altaica
ENSMZEG00005002360	pop4	91	61.386	ENSPTRG00000010779	POP4	92	61.386	Pan_troglodytes
ENSMZEG00005002360	pop4	91	61.881	ENSPANG00000008546	POP4	92	61.881	Papio_anubis
ENSMZEG00005002360	pop4	90	67.662	ENSPKIG00000004468	pop4	88	67.662	Paramormyrops_kingsleyae
ENSMZEG00005002360	pop4	99	57.078	ENSPSIG00000015690	POP4	100	63.235	Pelodiscus_sinensis
ENSMZEG00005002360	pop4	90	63.415	ENSPMGG00000008608	pop4	98	64.390	Periophthalmus_magnuspinnatus
ENSMZEG00005002360	pop4	92	59.606	ENSPEMG00000014034	-	93	59.606	Peromyscus_maniculatus_bairdii
ENSMZEG00005002360	pop4	91	50.000	ENSPEMG00000019982	-	92	50.000	Peromyscus_maniculatus_bairdii
ENSMZEG00005002360	pop4	67	65.306	ENSPMAG00000006265	pop4	96	56.316	Petromyzon_marinus
ENSMZEG00005002360	pop4	100	59.729	ENSPCIG00000024738	POP4	95	59.729	Phascolarctos_cinereus
ENSMZEG00005002360	pop4	100	71.622	ENSPFOG00000000925	pop4	100	71.622	Poecilia_formosa
ENSMZEG00005002360	pop4	100	71.622	ENSPLAG00000003161	pop4	100	71.622	Poecilia_latipinna
ENSMZEG00005002360	pop4	100	71.622	ENSPMEG00000002475	pop4	100	71.622	Poecilia_mexicana
ENSMZEG00005002360	pop4	99	69.545	ENSPREG00000022403	pop4	93	69.545	Poecilia_reticulata
ENSMZEG00005002360	pop4	91	61.881	ENSPPYG00000009805	POP4	92	61.881	Pongo_abelii
ENSMZEG00005002360	pop4	99	56.818	ENSPCAG00000007737	POP4	99	56.818	Procavia_capensis
ENSMZEG00005002360	pop4	92	59.804	ENSPCOG00000018055	POP4	93	59.804	Propithecus_coquereli
ENSMZEG00005002360	pop4	92	62.621	ENSPVAG00000006069	POP4	93	62.621	Pteropus_vampyrus
ENSMZEG00005002360	pop4	100	98.643	ENSPNYG00000020038	pop4	100	98.643	Pundamilia_nyererei
ENSMZEG00005002360	pop4	99	64.384	ENSPNAG00000005591	pop4	99	64.384	Pygocentrus_nattereri
ENSMZEG00005002360	pop4	88	63.265	ENSRNOG00000027646	Pop4	89	63.265	Rattus_norvegicus
ENSMZEG00005002360	pop4	72	58.491	ENSRBIG00000044769	POP4	84	63.846	Rhinopithecus_bieti
ENSMZEG00005002360	pop4	91	61.881	ENSRROG00000028903	POP4	92	61.881	Rhinopithecus_roxellana
ENSMZEG00005002360	pop4	57	33.813	YBR257W	-	50	33.813	Saccharomyces_cerevisiae
ENSMZEG00005002360	pop4	91	61.881	ENSSBOG00000032445	POP4	92	61.881	Saimiri_boliviensis_boliviensis
ENSMZEG00005002360	pop4	99	58.716	ENSSHAG00000016888	POP4	99	58.716	Sarcophilus_harrisii
ENSMZEG00005002360	pop4	98	62.673	ENSSFOG00015014556	pop4	97	62.673	Scleropages_formosus
ENSMZEG00005002360	pop4	100	77.578	ENSSMAG00000016611	pop4	100	77.578	Scophthalmus_maximus
ENSMZEG00005002360	pop4	99	78.281	ENSSDUG00000019865	pop4	89	78.281	Seriola_dumerili
ENSMZEG00005002360	pop4	99	78.281	ENSSLDG00000001763	pop4	99	78.281	Seriola_lalandi_dorsalis
ENSMZEG00005002360	pop4	92	60.294	ENSSARG00000004748	POP4	94	62.136	Sorex_araneus
ENSMZEG00005002360	pop4	99	81.448	ENSSPAG00000014364	pop4	99	81.448	Stegastes_partitus
ENSMZEG00005002360	pop4	88	63.077	ENSSSCG00000002854	POP4	93	60.784	Sus_scrofa
ENSMZEG00005002360	pop4	90	61.500	ENSTGUG00000008953	POP4	100	61.500	Taeniopygia_guttata
ENSMZEG00005002360	pop4	91	70.443	ENSTNIG00000006401	pop4	100	70.443	Tetraodon_nigroviridis
ENSMZEG00005002360	pop4	88	64.286	ENSTBEG00000002194	POP4	89	64.646	Tupaia_belangeri
ENSMZEG00005002360	pop4	88	62.051	ENSTTRG00000005882	POP4	89	62.051	Tursiops_truncatus
ENSMZEG00005002360	pop4	88	62.814	ENSUAMG00000003049	-	89	62.814	Ursus_americanus
ENSMZEG00005002360	pop4	88	62.814	ENSUMAG00000007522	-	89	62.814	Ursus_maritimus
ENSMZEG00005002360	pop4	88	61.026	ENSVVUG00000016876	-	68	62.437	Vulpes_vulpes
ENSMZEG00005002360	pop4	96	58.019	ENSXETG00000017598	pop4	96	58.019	Xenopus_tropicalis
ENSMZEG00005002360	pop4	99	69.820	ENSXCOG00000017695	pop4	93	69.820	Xiphophorus_couchianus
ENSMZEG00005002360	pop4	99	69.820	ENSXMAG00000013862	pop4	93	69.820	Xiphophorus_maculatus