EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005002466 (Gene tree)
Gene ID: 101476588
Gene Symbol: cnot3b
Alias: cnot3|wu:fi20g07|zgc:55934
Full Name: CCR4-NOT transcription complex subunit 3
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 43887 bases
Position: chrLG22:4255915-4299801
Accession: 101476588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005003168	Not3	PF04065.15	2.3e-96	1	1
ENSMZEP00005003168	NOT2_3_5	PF04153.18	7.2e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005003296	-	7041	XM_004569766	ENSMZEP00005003168	918 (aa)	XP_004569823	UPI000329AC93

Gene Model

Click here to download ENSMZEG00005002466's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005002466's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005002466	cnot3b	67	92.763	ENSG00000088038	CNOT3	100	93.814	Homo_sapiens
ENSMZEG00005002466	cnot3b	57	83.871	ENSAPOG00000015499	CNOT3	87	83.871	Acanthochromis_polyacanthus
ENSMZEG00005002466	cnot3b	65	95.434	ENSAPOG00000015002	cnot3b	100	95.434	Acanthochromis_polyacanthus
ENSMZEG00005002466	cnot3b	67	93.092	ENSAMEG00000004528	CNOT3	85	92.787	Ailuropoda_melanoleuca
ENSMZEG00005002466	cnot3b	67	96.875	ENSACIG00000003652	cnot3b	99	96.875	Amphilophus_citrinellus
ENSMZEG00005002466	cnot3b	66	95.726	ENSACIG00000006635	cnot3a	100	95.726	Amphilophus_citrinellus
ENSMZEG00005002466	cnot3b	97	79.314	ENSAOCG00000018385	-	99	83.127	Amphiprion_ocellaris
ENSMZEG00005002466	cnot3b	97	82.483	ENSAPEG00000002640	cnot3b	99	97.619	Amphiprion_percula
ENSMZEG00005002466	cnot3b	100	65.991	ENSATEG00000022737	cnot3a	100	66.596	Anabas_testudineus
ENSMZEG00005002466	cnot3b	100	87.433	ENSATEG00000015777	cnot3b	100	87.327	Anabas_testudineus
ENSMZEG00005002466	cnot3b	83	70.021	ENSACAG00000016085	CNOT3	89	92.131	Anolis_carolinensis
ENSMZEG00005002466	cnot3b	67	92.763	ENSANAG00000025756	CNOT3	85	92.459	Aotus_nancymaae
ENSMZEG00005002466	cnot3b	100	99.349	ENSACLG00000016702	cnot3b	100	99.349	Astatotilapia_calliptera
ENSMZEG00005002466	cnot3b	100	70.457	ENSAMXG00000009447	cnot3b	98	88.710	Astyanax_mexicanus
ENSMZEG00005002466	cnot3b	100	67.230	ENSAMXG00000012359	cnot3a	100	68.365	Astyanax_mexicanus
ENSMZEG00005002466	cnot3b	67	92.763	ENSBTAG00000014900	CNOT3	86	92.459	Bos_taurus
ENSMZEG00005002466	cnot3b	67	92.763	ENSCJAG00000001094	CNOT3	85	92.459	Callithrix_jacchus
ENSMZEG00005002466	cnot3b	67	90.759	ENSCHIG00000015302	CNOT3	89	90.461	Capra_hircus
ENSMZEG00005002466	cnot3b	67	92.763	ENSTSYG00000008058	CNOT3	85	92.459	Carlito_syrichta
ENSMZEG00005002466	cnot3b	74	79.683	ENSCAPG00000009533	CNOT3	85	92.459	Cavia_aperea
ENSMZEG00005002466	cnot3b	74	79.683	ENSCPOG00000020741	CNOT3	97	92.459	Cavia_porcellus
ENSMZEG00005002466	cnot3b	67	92.763	ENSCCAG00000036290	CNOT3	85	92.459	Cebus_capucinus
ENSMZEG00005002466	cnot3b	75	76.396	ENSCATG00000030324	CNOT3	85	92.459	Cercocebus_atys
ENSMZEG00005002466	cnot3b	76	92.763	ENSCLAG00000003302	CNOT3	100	86.585	Chinchilla_lanigera
ENSMZEG00005002466	cnot3b	67	92.763	ENSCSAG00000001900	CNOT3	97	92.459	Chlorocebus_sabaeus
ENSMZEG00005002466	cnot3b	82	72.271	ENSCPBG00000011655	CNOT3	88	93.115	Chrysemys_picta_bellii
ENSMZEG00005002466	cnot3b	83	52.083	ENSCING00000000293	-	71	67.355	Ciona_intestinalis
ENSMZEG00005002466	cnot3b	67	92.763	ENSCANG00000013408	CNOT3	85	92.459	Colobus_angolensis_palliatus
ENSMZEG00005002466	cnot3b	100	63.119	ENSCSEG00000003574	cnot3a	100	65.377	Cynoglossus_semilaevis
ENSMZEG00005002466	cnot3b	98	82.589	ENSCSEG00000016892	cnot3b	100	66.918	Cynoglossus_semilaevis
ENSMZEG00005002466	cnot3b	100	78.902	ENSCVAG00000022122	cnot3b	100	81.163	Cyprinodon_variegatus
ENSMZEG00005002466	cnot3b	100	66.524	ENSCVAG00000008168	cnot3a	100	65.748	Cyprinodon_variegatus
ENSMZEG00005002466	cnot3b	100	69.556	ENSDARG00000019842	cnot3b	100	71.274	Danio_rerio
ENSMZEG00005002466	cnot3b	100	65.612	ENSDARG00000007135	cnot3a	100	67.548	Danio_rerio
ENSMZEG00005002466	cnot3b	67	92.434	ENSDNOG00000045972	CNOT3	85	92.131	Dasypus_novemcinctus
ENSMZEG00005002466	cnot3b	67	92.763	ENSDORG00000008021	Cnot3	100	81.609	Dipodomys_ordii
ENSMZEG00005002466	cnot3b	52	100.000	ENSETEG00000006305	CNOT3	59	100.000	Echinops_telfairi
ENSMZEG00005002466	cnot3b	67	71.753	ENSEBUG00000010437	cnot3a	96	69.156	Eptatretus_burgeri
ENSMZEG00005002466	cnot3b	100	72.679	ENSELUG00000000953	cnot3b	100	71.958	Esox_lucius
ENSMZEG00005002466	cnot3b	100	66.213	ENSELUG00000014743	cnot3a	100	66.181	Esox_lucius
ENSMZEG00005002466	cnot3b	67	92.763	ENSFCAG00000014042	CNOT3	85	92.459	Felis_catus
ENSMZEG00005002466	cnot3b	100	79.808	ENSFHEG00000001696	cnot3b	100	80.749	Fundulus_heteroclitus
ENSMZEG00005002466	cnot3b	100	64.833	ENSFHEG00000023166	cnot3a	97	96.154	Fundulus_heteroclitus
ENSMZEG00005002466	cnot3b	94	63.440	ENSGMOG00000005365	cnot3a	98	62.870	Gadus_morhua
ENSMZEG00005002466	cnot3b	100	80.475	ENSGAFG00000003459	cnot3b	100	80.496	Gambusia_affinis
ENSMZEG00005002466	cnot3b	80	69.444	ENSGAGG00000012677	CNOT3	87	92.202	Gopherus_agassizii
ENSMZEG00005002466	cnot3b	67	92.763	ENSGGOG00000012996	CNOT3	97	92.459	Gorilla_gorilla
ENSMZEG00005002466	cnot3b	99	88.865	ENSHBUG00000019699	cnot3b	99	88.865	Haplochromis_burtoni
ENSMZEG00005002466	cnot3b	67	92.763	ENSHGLG00000008821	CNOT3	100	81.609	Heterocephalus_glaber_female
ENSMZEG00005002466	cnot3b	59	83.908	ENSHGLG00100006181	CNOT3	100	81.609	Heterocephalus_glaber_male
ENSMZEG00005002466	cnot3b	93	78.151	ENSHCOG00000020968	cnot3a	100	65.126	Hippocampus_comes
ENSMZEG00005002466	cnot3b	100	69.081	ENSIPUG00000009046	cnot3b	100	67.206	Ictalurus_punctatus
ENSMZEG00005002466	cnot3b	100	63.961	ENSIPUG00000000167	cnot3	100	63.735	Ictalurus_punctatus
ENSMZEG00005002466	cnot3b	67	92.763	ENSSTOG00000028248	CNOT3	85	92.459	Ictidomys_tridecemlineatus
ENSMZEG00005002466	cnot3b	67	93.092	ENSJJAG00000014594	Cnot3	100	81.609	Jaculus_jaculus
ENSMZEG00005002466	cnot3b	100	84.301	ENSKMAG00000018723	cnot3b	100	86.129	Kryptolebias_marmoratus
ENSMZEG00005002466	cnot3b	100	65.705	ENSKMAG00000004863	cnot3a	100	80.100	Kryptolebias_marmoratus
ENSMZEG00005002466	cnot3b	97	82.210	ENSLBEG00000018278	cnot3b	99	81.878	Labrus_bergylta
ENSMZEG00005002466	cnot3b	51	91.732	ENSLBEG00000017296	cnot3a	64	91.732	Labrus_bergylta
ENSMZEG00005002466	cnot3b	68	92.763	ENSLACG00000009742	CNOT3	98	92.459	Latimeria_chalumnae
ENSMZEG00005002466	cnot3b	53	96.405	ENSLOCG00000000005	cnot3b	83	94.505	Lepisosteus_oculatus
ENSMZEG00005002466	cnot3b	67	91.803	ENSLAFG00000022133	CNOT3	85	91.503	Loxodonta_africana
ENSMZEG00005002466	cnot3b	75	76.396	ENSMFAG00000040073	CNOT3	97	92.459	Macaca_fascicularis
ENSMZEG00005002466	cnot3b	60	92.017	ENSMMUG00000009698	CNOT3	100	99.020	Macaca_mulatta
ENSMZEG00005002466	cnot3b	75	76.396	ENSMNEG00000036750	CNOT3	97	92.459	Macaca_nemestrina
ENSMZEG00005002466	cnot3b	75	76.396	ENSMLEG00000036579	CNOT3	84	92.459	Mandrillus_leucophaeus
ENSMZEG00005002466	cnot3b	100	86.126	ENSMAMG00000019357	cnot3b	100	87.407	Mastacembelus_armatus
ENSMZEG00005002466	cnot3b	88	77.215	ENSMAUG00000014996	Cnot3	85	92.787	Mesocricetus_auratus
ENSMZEG00005002466	cnot3b	67	92.763	ENSMICG00000002370	CNOT3	84	92.459	Microcebus_murinus
ENSMZEG00005002466	cnot3b	69	93.590	ENSMMOG00000013086	cnot3b	72	94.009	Mola_mola
ENSMZEG00005002466	cnot3b	81	90.598	ENSMMOG00000016446	cnot3a	100	65.426	Mola_mola
ENSMZEG00005002466	cnot3b	100	65.843	ENSMALG00000009204	cnot3a	100	66.631	Monopterus_albus
ENSMZEG00005002466	cnot3b	69	93.607	ENSMALG00000004936	cnot3b	77	92.929	Monopterus_albus
ENSMZEG00005002466	cnot3b	81	72.120	MGP_CAROLIEiJ_G0029095	Cnot3	100	97.000	Mus_caroli
ENSMZEG00005002466	cnot3b	81	72.120	ENSMUSG00000035632	Cnot3	100	97.000	Mus_musculus
ENSMZEG00005002466	cnot3b	81	72.581	MGP_PahariEiJ_G0020964	Cnot3	100	97.000	Mus_pahari
ENSMZEG00005002466	cnot3b	81	72.120	MGP_SPRETEiJ_G0030148	Cnot3	100	97.000	Mus_spretus
ENSMZEG00005002466	cnot3b	67	92.763	ENSMPUG00000010352	CNOT3	100	92.459	Mustela_putorius_furo
ENSMZEG00005002466	cnot3b	75	76.396	ENSNGAG00000013266	Cnot3	73	92.459	Nannospalax_galili
ENSMZEG00005002466	cnot3b	90	82.403	ENSNBRG00000003336	cnot3b	99	94.248	Neolamprologus_brichardi
ENSMZEG00005002466	cnot3b	67	92.763	ENSNLEG00000006272	CNOT3	67	92.459	Nomascus_leucogenys
ENSMZEG00005002466	cnot3b	84	75.063	ENSODEG00000000705	CNOT3	100	92.459	Octodon_degus
ENSMZEG00005002466	cnot3b	100	97.283	ENSONIG00000007047	cnot3b	100	97.283	Oreochromis_niloticus
ENSMZEG00005002466	cnot3b	67	92.763	ENSOCUG00000007691	CNOT3	85	92.459	Oryctolagus_cuniculus
ENSMZEG00005002466	cnot3b	100	82.093	ENSORLG00000005982	cnot3b	100	81.425	Oryzias_latipes
ENSMZEG00005002466	cnot3b	100	81.877	ENSORLG00020005779	cnot3b	100	80.583	Oryzias_latipes_hni
ENSMZEG00005002466	cnot3b	100	81.418	ENSORLG00015019021	cnot3b	100	81.525	Oryzias_latipes_hsok
ENSMZEG00005002466	cnot3b	55	91.489	ENSOMEG00000010309	cnot3a	100	66.631	Oryzias_melastigma
ENSMZEG00005002466	cnot3b	100	81.485	ENSOMEG00000015557	cnot3b	100	81.897	Oryzias_melastigma
ENSMZEG00005002466	cnot3b	67	92.763	ENSOGAG00000006945	CNOT3	85	92.459	Otolemur_garnettii
ENSMZEG00005002466	cnot3b	67	92.763	ENSPPAG00000002748	CNOT3	97	92.459	Pan_paniscus
ENSMZEG00005002466	cnot3b	67	92.763	ENSPPRG00000011705	CNOT3	85	92.459	Panthera_pardus
ENSMZEG00005002466	cnot3b	61	92.953	ENSPTIG00000008781	CNOT3	92	92.953	Panthera_tigris_altaica
ENSMZEG00005002466	cnot3b	67	92.763	ENSPTRG00000046717	-	97	92.459	Pan_troglodytes
ENSMZEG00005002466	cnot3b	67	92.763	ENSPTRG00000011444	CNOT3	97	92.459	Pan_troglodytes
ENSMZEG00005002466	cnot3b	75	76.396	ENSPANG00000009375	CNOT3	97	92.459	Papio_anubis
ENSMZEG00005002466	cnot3b	97	68.468	ENSPKIG00000015967	-	99	95.726	Paramormyrops_kingsleyae
ENSMZEG00005002466	cnot3b	100	68.096	ENSPKIG00000011733	CNOT3	100	66.875	Paramormyrops_kingsleyae
ENSMZEG00005002466	cnot3b	98	69.923	ENSPMGG00000022539	cnot3b	99	71.554	Periophthalmus_magnuspinnatus
ENSMZEG00005002466	cnot3b	84	76.962	ENSPEMG00000024185	Cnot3	85	92.787	Peromyscus_maniculatus_bairdii
ENSMZEG00005002466	cnot3b	68	92.434	ENSPCIG00000023018	CNOT3	90	92.131	Phascolarctos_cinereus
ENSMZEG00005002466	cnot3b	78	83.237	ENSPFOG00000008693	cnot3a	99	89.423	Poecilia_formosa
ENSMZEG00005002466	cnot3b	100	80.496	ENSPFOG00000007168	cnot3b	100	81.338	Poecilia_formosa
ENSMZEG00005002466	cnot3b	100	80.496	ENSPLAG00000013457	cnot3b	100	81.338	Poecilia_latipinna
ENSMZEG00005002466	cnot3b	100	81.789	ENSPMEG00000010184	cnot3b	100	81.446	Poecilia_mexicana
ENSMZEG00005002466	cnot3b	99	75.519	ENSPREG00000000662	cnot3b	97	76.393	Poecilia_reticulata
ENSMZEG00005002466	cnot3b	69	86.989	ENSPREG00000007592	cnot3a	100	89.844	Poecilia_reticulata
ENSMZEG00005002466	cnot3b	67	92.434	ENSPPYG00000010372	CNOT3	97	92.131	Pongo_abelii
ENSMZEG00005002466	cnot3b	67	92.763	ENSPCOG00000017673	CNOT3	89	92.459	Propithecus_coquereli
ENSMZEG00005002466	cnot3b	67	91.776	ENSPVAG00000015564	CNOT3	70	91.475	Pteropus_vampyrus
ENSMZEG00005002466	cnot3b	99	89.520	ENSPNYG00000003358	cnot3b	99	89.520	Pundamilia_nyererei
ENSMZEG00005002466	cnot3b	100	73.312	ENSPNAG00000027459	cnot3b	100	73.786	Pygocentrus_nattereri
ENSMZEG00005002466	cnot3b	70	84.859	ENSPNAG00000017679	cnot3a	100	67.653	Pygocentrus_nattereri
ENSMZEG00005002466	cnot3b	81	72.811	ENSRNOG00000053234	Cnot3	85	92.787	Rattus_norvegicus
ENSMZEG00005002466	cnot3b	67	92.763	ENSRBIG00000031025	CNOT3	85	92.459	Rhinopithecus_bieti
ENSMZEG00005002466	cnot3b	67	92.763	ENSRROG00000003872	CNOT3	85	92.459	Rhinopithecus_roxellana
ENSMZEG00005002466	cnot3b	80	92.763	ENSSBOG00000030268	CNOT3	85	92.459	Saimiri_boliviensis_boliviensis
ENSMZEG00005002466	cnot3b	100	71.168	ENSSFOG00015019203	-	100	70.043	Scleropages_formosus
ENSMZEG00005002466	cnot3b	100	71.888	ENSSFOG00015000248	cnot3	100	72.013	Scleropages_formosus
ENSMZEG00005002466	cnot3b	100	82.609	ENSSMAG00000016031	cnot3b	100	83.563	Scophthalmus_maximus
ENSMZEG00005002466	cnot3b	100	88.617	ENSSDUG00000003428	cnot3b	100	89.468	Seriola_dumerili
ENSMZEG00005002466	cnot3b	60	96.154	ENSSDUG00000008181	cnot3a	100	88.550	Seriola_dumerili
ENSMZEG00005002466	cnot3b	100	88.404	ENSSLDG00000014376	cnot3b	100	89.255	Seriola_lalandi_dorsalis
ENSMZEG00005002466	cnot3b	89	72.562	ENSSPUG00000008510	CNOT3	89	92.459	Sphenodon_punctatus
ENSMZEG00005002466	cnot3b	83	92.520	ENSSPAG00000003858	cnot3a	92	92.520	Stegastes_partitus
ENSMZEG00005002466	cnot3b	100	88.021	ENSSPAG00000001429	cnot3b	100	88.021	Stegastes_partitus
ENSMZEG00005002466	cnot3b	67	92.763	ENSSSCG00000003264	CNOT3	84	92.459	Sus_scrofa
ENSMZEG00005002466	cnot3b	80	77.315	ENSTRUG00000007248	cnot3b	91	92.670	Takifugu_rubripes
ENSMZEG00005002466	cnot3b	94	77.993	ENSTNIG00000005663	cnot3b	100	78.905	Tetraodon_nigroviridis
ENSMZEG00005002466	cnot3b	67	93.092	ENSUAMG00000005234	CNOT3	85	92.787	Ursus_americanus
ENSMZEG00005002466	cnot3b	59	91.398	ENSUMAG00000010934	CNOT3	91	91.398	Ursus_maritimus
ENSMZEG00005002466	cnot3b	67	92.763	ENSVVUG00000008239	CNOT3	96	92.459	Vulpes_vulpes
ENSMZEG00005002466	cnot3b	77	74.038	ENSXETG00000003166	cnot3	97	91.586	Xenopus_tropicalis
ENSMZEG00005002466	cnot3b	89	90.228	ENSXCOG00000019460	cnot3a	97	95.726	Xiphophorus_couchianus
ENSMZEG00005002466	cnot3b	97	76.392	ENSXCOG00000018976	cnot3b	99	76.451	Xiphophorus_couchianus
ENSMZEG00005002466	cnot3b	100	80.666	ENSXMAG00000014176	cnot3b	100	81.055	Xiphophorus_maculatus