EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005002545 (Gene tree)
Gene ID: -
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1B
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 15675 bases
Position: chrLG19:5335437-5351111
Accession: 101472745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005003301	La	PF05383.17	2.4e-21	1	1
ENSMZEP00005003332	La	PF05383.17	3.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005003464	-	2292	XM_004554749	ENSMZEP00005003332	763 (aa)	XP_004554806	-
ENSMZET00005003433	-	2026	-	ENSMZEP00005003301	494 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005002545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005002545's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005002545	larp1b	94	60.733	ENSG00000138709	LARP1B	88	53.744	Homo_sapiens
ENSMZEG00005002545	larp1b	100	84.655	ENSAPOG00000020101	larp1b	76	84.527	Acanthochromis_polyacanthus
ENSMZEG00005002545	larp1b	90	55.408	ENSAMEG00000002748	LARP1B	79	54.967	Ailuropoda_melanoleuca
ENSMZEG00005002545	larp1b	100	88.818	ENSACIG00000023890	larp1b	76	88.818	Amphilophus_citrinellus
ENSMZEG00005002545	larp1b	86	81.591	ENSAOCG00000014268	larp1b	74	81.885	Amphiprion_ocellaris
ENSMZEG00005002545	larp1b	100	85.019	ENSAPEG00000004126	larp1b	76	84.891	Amphiprion_percula
ENSMZEG00005002545	larp1b	100	85.180	ENSATEG00000017849	larp1b	76	84.665	Anabas_testudineus
ENSMZEG00005002545	larp1b	91	59.603	ENSAPLG00000010129	LARP1B	75	62.248	Anas_platyrhynchos
ENSMZEG00005002545	larp1b	88	64.266	ENSACAG00000011338	LARP1B	68	64.232	Anolis_carolinensis
ENSMZEG00005002545	larp1b	89	54.120	ENSANAG00000034618	LARP1B	78	56.274	Aotus_nancymaae
ENSMZEG00005002545	larp1b	100	96.543	ENSACLG00000011948	larp1b	72	96.543	Astatotilapia_calliptera
ENSMZEG00005002545	larp1b	100	59.929	ENSAMXG00000006805	larp1b	69	65.369	Astyanax_mexicanus
ENSMZEG00005002545	larp1b	98	60.076	ENSBTAG00000012135	LARP1B	82	53.982	Bos_taurus
ENSMZEG00005002545	larp1b	96	59.686	ENSCJAG00000003338	LARP1B	77	63.385	Callithrix_jacchus
ENSMZEG00005002545	larp1b	98	60.660	ENSCAFG00000003831	LARP1B	80	65.414	Canis_familiaris
ENSMZEG00005002545	larp1b	98	60.506	ENSCAFG00020018899	LARP1B	75	63.558	Canis_lupus_dingo
ENSMZEG00005002545	larp1b	98	58.291	ENSCHIG00000023144	LARP1B	75	62.824	Capra_hircus
ENSMZEG00005002545	larp1b	55	53.929	ENSTSYG00000002037	-	84	55.738	Carlito_syrichta
ENSMZEG00005002545	larp1b	96	59.769	ENSCCAG00000021948	LARP1B	76	62.267	Cebus_capucinus
ENSMZEG00005002545	larp1b	94	59.764	ENSCATG00000013541	LARP1B	76	61.119	Cercocebus_atys
ENSMZEG00005002545	larp1b	52	54.887	ENSCLAG00000006448	-	83	55.372	Chinchilla_lanigera
ENSMZEG00005002545	larp1b	94	61.227	ENSCSAG00000003582	LARP1B	76	62.321	Chlorocebus_sabaeus
ENSMZEG00005002545	larp1b	94	58.530	ENSCHOG00000005354	LARP1B	75	59.456	Choloepus_hoffmanni
ENSMZEG00005002545	larp1b	98	60.737	ENSCPBG00000017480	LARP1B	67	62.074	Chrysemys_picta_bellii
ENSMZEG00005002545	larp1b	94	60.813	ENSCANG00000026958	LARP1B	88	53.521	Colobus_angolensis_palliatus
ENSMZEG00005002545	larp1b	54	55.185	ENSCGRG00001004660	-	84	55.785	Cricetulus_griseus_chok1gshd
ENSMZEG00005002545	larp1b	54	55.185	ENSCGRG00000001914	-	84	55.785	Cricetulus_griseus_crigri
ENSMZEG00005002545	larp1b	95	78.439	ENSCSEG00000013519	larp1b	69	78.856	Cynoglossus_semilaevis
ENSMZEG00005002545	larp1b	100	80.435	ENSCVAG00000005046	larp1b	77	77.695	Cyprinodon_variegatus
ENSMZEG00005002545	larp1b	98	67.427	ENSDARG00000061169	larp1b	65	68.207	Danio_rerio
ENSMZEG00005002545	larp1b	90	54.646	ENSDNOG00000018765	-	85	54.204	Dasypus_novemcinctus
ENSMZEG00005002545	larp1b	85	53.188	ENSETEG00000012497	LARP1B	72	54.600	Echinops_telfairi
ENSMZEG00005002545	larp1b	82	53.343	ENSEBUG00000003668	larp1b	71	53.203	Eptatretus_burgeri
ENSMZEG00005002545	larp1b	98	59.091	ENSEASG00005018106	LARP1B	92	52.899	Equus_asinus_asinus
ENSMZEG00005002545	larp1b	98	59.872	ENSECAG00000001088	LARP1B	62	63.358	Equus_caballus
ENSMZEG00005002545	larp1b	82	61.557	ENSELUG00000023774	larp1b	70	66.186	Esox_lucius
ENSMZEG00005002545	larp1b	90	54.746	ENSFCAG00000014650	-	83	54.525	Felis_catus
ENSMZEG00005002545	larp1b	97	57.534	ENSFALG00000008098	LARP1B	75	59.944	Ficedula_albicollis
ENSMZEG00005002545	larp1b	100	81.481	ENSFHEG00000010264	larp1b	73	80.843	Fundulus_heteroclitus
ENSMZEG00005002545	larp1b	84	69.408	ENSGMOG00000005207	larp1b	60	75.277	Gadus_morhua
ENSMZEG00005002545	larp1b	92	60.215	ENSGALG00000010207	LARP1B	66	61.988	Gallus_gallus
ENSMZEG00005002545	larp1b	100	81.306	ENSGAFG00000012012	larp1b	89	81.178	Gambusia_affinis
ENSMZEG00005002545	larp1b	96	72.914	ENSGACG00000004609	larp1b	70	73.582	Gasterosteus_aculeatus
ENSMZEG00005002545	larp1b	98	60.941	ENSGAGG00000017209	LARP1B	66	62.890	Gopherus_agassizii
ENSMZEG00005002545	larp1b	94	60.471	ENSGGOG00000015900	LARP1B	76	61.605	Gorilla_gorilla
ENSMZEG00005002545	larp1b	100	96.282	ENSHBUG00000009730	larp1b	76	96.282	Haplochromis_burtoni
ENSMZEG00005002545	larp1b	53	53.285	ENSHGLG00000006728	-	83	55.285	Heterocephalus_glaber_female
ENSMZEG00005002545	larp1b	56	53.521	ENSHGLG00100014041	-	79	56.250	Heterocephalus_glaber_male
ENSMZEG00005002545	larp1b	90	77.652	ENSHCOG00000000918	larp1b	95	80.271	Hippocampus_comes
ENSMZEG00005002545	larp1b	99	65.337	ENSIPUG00000012138	larp1b	65	68.902	Ictalurus_punctatus
ENSMZEG00005002545	larp1b	52	50.758	ENSSTOG00000021917	-	75	49.814	Ictidomys_tridecemlineatus
ENSMZEG00005002545	larp1b	53	51.673	ENSSTOG00000008596	-	83	52.282	Ictidomys_tridecemlineatus
ENSMZEG00005002545	larp1b	53	43.233	ENSSTOG00000034510	-	69	44.737	Ictidomys_tridecemlineatus
ENSMZEG00005002545	larp1b	54	55.185	ENSJJAG00000022360	Larp1b	80	57.328	Jaculus_jaculus
ENSMZEG00005002545	larp1b	95	79.296	ENSKMAG00000011589	larp1b	74	79.161	Kryptolebias_marmoratus
ENSMZEG00005002545	larp1b	100	80.485	ENSLBEG00000005655	larp1b	73	80.293	Labrus_bergylta
ENSMZEG00005002545	larp1b	94	64.754	ENSLACG00000015247	LARP1B	82	48.968	Latimeria_chalumnae
ENSMZEG00005002545	larp1b	95	65.490	ENSLOCG00000010684	larp1b	76	64.967	Lepisosteus_oculatus
ENSMZEG00005002545	larp1b	54	56.618	ENSLAFG00000008473	-	77	56.618	Loxodonta_africana
ENSMZEG00005002545	larp1b	94	61.075	ENSMFAG00000002218	LARP1B	76	62.410	Macaca_fascicularis
ENSMZEG00005002545	larp1b	94	61.075	ENSMMUG00000021347	LARP1B	76	62.410	Macaca_mulatta
ENSMZEG00005002545	larp1b	86	60.888	ENSMNEG00000030406	LARP1B	82	60.901	Macaca_nemestrina
ENSMZEG00005002545	larp1b	94	60.944	ENSMLEG00000009306	LARP1B	77	62.410	Mandrillus_leucophaeus
ENSMZEG00005002545	larp1b	95	83.311	ENSMAMG00000000081	larp1b	77	82.990	Mastacembelus_armatus
ENSMZEG00005002545	larp1b	80	60.606	ENSMGAG00000004809	LARP1B	73	59.610	Meleagris_gallopavo
ENSMZEG00005002545	larp1b	54	54.444	ENSMAUG00000007879	-	84	54.959	Mesocricetus_auratus
ENSMZEG00005002545	larp1b	94	62.983	ENSMICG00000036111	LARP1B	76	64.380	Microcebus_murinus
ENSMZEG00005002545	larp1b	57	46.690	ENSMICG00000037883	-	75	46.690	Microcebus_murinus
ENSMZEG00005002545	larp1b	77	44.619	ENSMICG00000028052	-	81	42.518	Microcebus_murinus
ENSMZEG00005002545	larp1b	55	54.480	ENSMOCG00000001490	Larp1b	92	55.805	Microtus_ochrogaster
ENSMZEG00005002545	larp1b	98	59.209	ENSMODG00000012300	LARP1B	62	62.994	Monodelphis_domestica
ENSMZEG00005002545	larp1b	100	82.759	ENSMALG00000003638	larp1b	77	82.949	Monopterus_albus
ENSMZEG00005002545	larp1b	55	53.791	MGP_CAROLIEiJ_G0024962	Larp1b	84	54.959	Mus_caroli
ENSMZEG00005002545	larp1b	55	54.152	ENSMUSG00000025762	Larp1b	84	55.785	Mus_musculus
ENSMZEG00005002545	larp1b	54	55.185	MGP_PahariEiJ_G0026403	Larp1b	84	55.785	Mus_pahari
ENSMZEG00005002545	larp1b	55	54.152	MGP_SPRETEiJ_G0025897	Larp1b	84	55.785	Mus_spretus
ENSMZEG00005002545	larp1b	98	60.660	ENSMPUG00000017365	LARP1B	61	64.327	Mustela_putorius_furo
ENSMZEG00005002545	larp1b	86	62.108	ENSMLUG00000010229	LARP1B	75	61.396	Myotis_lucifugus
ENSMZEG00005002545	larp1b	100	91.027	ENSNBRG00000023846	larp1b	81	91.027	Neolamprologus_brichardi
ENSMZEG00005002545	larp1b	96	59.383	ENSNLEG00000013819	LARP1B	76	61.516	Nomascus_leucogenys
ENSMZEG00005002545	larp1b	82	58.798	ENSMEUG00000010308	LARP1B	73	58.990	Notamacropus_eugenii
ENSMZEG00005002545	larp1b	96	51.729	ENSOPRG00000005478	LARP1B	76	54.077	Ochotona_princeps
ENSMZEG00005002545	larp1b	52	56.015	ENSODEG00000001292	-	84	55.785	Octodon_degus
ENSMZEG00005002545	larp1b	91	93.978	ENSONIG00000012386	larp1b	78	90.514	Oreochromis_niloticus
ENSMZEG00005002545	larp1b	98	58.228	ENSOCUG00000013330	LARP1B	74	61.370	Oryctolagus_cuniculus
ENSMZEG00005002545	larp1b	92	80.362	ENSORLG00000017954	larp1b	73	78.209	Oryzias_latipes
ENSMZEG00005002545	larp1b	96	79.144	ENSORLG00020013081	larp1b	69	78.209	Oryzias_latipes_hni
ENSMZEG00005002545	larp1b	96	79.545	ENSORLG00015009580	larp1b	73	78.610	Oryzias_latipes_hsok
ENSMZEG00005002545	larp1b	96	81.794	ENSOMEG00000004210	larp1b	73	80.991	Oryzias_melastigma
ENSMZEG00005002545	larp1b	91	63.324	ENSOGAG00000005771	LARP1B	76	65.269	Otolemur_garnettii
ENSMZEG00005002545	larp1b	93	60.502	ENSOARG00000015300	LARP1B	76	62.554	Ovis_aries
ENSMZEG00005002545	larp1b	94	60.733	ENSPPAG00000030439	LARP1B	76	62.267	Pan_paniscus
ENSMZEG00005002545	larp1b	90	54.746	ENSPPRG00000002743	-	83	54.525	Panthera_pardus
ENSMZEG00005002545	larp1b	90	54.746	ENSPTIG00000011225	LARP1B	83	54.525	Panthera_tigris_altaica
ENSMZEG00005002545	larp1b	94	60.733	ENSPTRG00000016437	LARP1B	76	61.891	Pan_troglodytes
ENSMZEG00005002545	larp1b	94	61.075	ENSPANG00000012488	LARP1B	76	62.410	Papio_anubis
ENSMZEG00005002545	larp1b	85	60.444	ENSPKIG00000014360	larp1b	72	60.121	Paramormyrops_kingsleyae
ENSMZEG00005002545	larp1b	92	62.450	ENSPSIG00000012885	LARP1B	75	62.465	Pelodiscus_sinensis
ENSMZEG00005002545	larp1b	94	75.951	ENSPMGG00000007207	larp1b	90	75.000	Periophthalmus_magnuspinnatus
ENSMZEG00005002545	larp1b	82	54.993	ENSPMAG00000002700	larp1b	75	54.345	Petromyzon_marinus
ENSMZEG00005002545	larp1b	98	60.283	ENSPCIG00000026516	LARP1B	91	64.029	Phascolarctos_cinereus
ENSMZEG00005002545	larp1b	94	78.678	ENSPFOG00000022837	-	67	78.224	Poecilia_formosa
ENSMZEG00005002545	larp1b	100	79.478	ENSPFOG00000019519	larp1b	72	79.602	Poecilia_formosa
ENSMZEG00005002545	larp1b	100	82.028	ENSPLAG00000007115	larp1b	72	81.772	Poecilia_latipinna
ENSMZEG00005002545	larp1b	100	82.028	ENSPMEG00000001224	larp1b	75	81.772	Poecilia_mexicana
ENSMZEG00005002545	larp1b	57	79.152	ENSPREG00000005955	-	91	79.152	Poecilia_reticulata
ENSMZEG00005002545	larp1b	96	58.718	ENSPCAG00000007546	LARP1B	76	60.832	Procavia_capensis
ENSMZEG00005002545	larp1b	92	54.957	ENSPCOG00000021874	LARP1B	72	67.544	Propithecus_coquereli
ENSMZEG00005002545	larp1b	96	57.274	ENSPVAG00000005373	LARP1B	76	60.761	Pteropus_vampyrus
ENSMZEG00005002545	larp1b	100	93.766	ENSPNYG00000017357	larp1b	100	93.766	Pundamilia_nyererei
ENSMZEG00005002545	larp1b	99	65.875	ENSPNAG00000008823	larp1b	71	69.346	Pygocentrus_nattereri
ENSMZEG00005002545	larp1b	54	55.926	ENSRNOG00000038366	Larp1b	77	55.556	Rattus_norvegicus
ENSMZEG00005002545	larp1b	52	51.527	ENSRBIG00000038568	-	70	50.958	Rhinopithecus_bieti
ENSMZEG00005002545	larp1b	90	53.422	ENSRBIG00000039982	-	85	52.980	Rhinopithecus_bieti
ENSMZEG00005002545	larp1b	94	61.075	ENSRROG00000030771	LARP1B	76	62.410	Rhinopithecus_roxellana
ENSMZEG00005002545	larp1b	90	54.505	ENSSHAG00000014474	LARP1B	71	56.879	Sarcophilus_harrisii
ENSMZEG00005002545	larp1b	93	84.828	ENSSMAG00000006347	larp1b	83	79.500	Scophthalmus_maximus
ENSMZEG00005002545	larp1b	100	83.567	ENSSDUG00000004182	larp1b	76	84.459	Seriola_dumerili
ENSMZEG00005002545	larp1b	94	80.668	ENSSLDG00000014613	larp1b	74	79.832	Seriola_lalandi_dorsalis
ENSMZEG00005002545	larp1b	98	59.764	ENSSPUG00000011837	LARP1B	77	63.540	Sphenodon_punctatus
ENSMZEG00005002545	larp1b	100	80.440	ENSSPAG00000017772	larp1b	77	80.708	Stegastes_partitus
ENSMZEG00005002545	larp1b	98	59.292	ENSSSCG00000034280	LARP1B	67	76.667	Sus_scrofa
ENSMZEG00005002545	larp1b	88	61.615	ENSTGUG00000002098	-	80	62.500	Taeniopygia_guttata
ENSMZEG00005002545	larp1b	95	79.048	ENSTRUG00000005612	larp1b	72	77.823	Takifugu_rubripes
ENSMZEG00005002545	larp1b	88	77.966	ENSTNIG00000012398	larp1b	74	80.781	Tetraodon_nigroviridis
ENSMZEG00005002545	larp1b	75	60.854	ENSTBEG00000004177	LARP1B	65	60.357	Tupaia_belangeri
ENSMZEG00005002545	larp1b	93	58.311	ENSTTRG00000012984	LARP1B	76	59.483	Tursiops_truncatus
ENSMZEG00005002545	larp1b	56	48.014	ENSUAMG00000016938	-	75	48.375	Ursus_americanus
ENSMZEG00005002545	larp1b	98	60.203	ENSUMAG00000007373	LARP1B	74	63.557	Ursus_maritimus
ENSMZEG00005002545	larp1b	86	54.986	ENSVPAG00000007223	LARP1B	76	55.252	Vicugna_pacos
ENSMZEG00005002545	larp1b	98	60.787	ENSVVUG00000011307	LARP1B	78	63.757	Vulpes_vulpes
ENSMZEG00005002545	larp1b	86	59.912	ENSXETG00000022512	larp1b	67	60.178	Xenopus_tropicalis
ENSMZEG00005002545	larp1b	100	73.462	ENSXCOG00000004435	larp1b	81	72.821	Xiphophorus_couchianus
ENSMZEG00005002545	larp1b	100	82.202	ENSXMAG00000008150	larp1b	76	80.025	Xiphophorus_maculatus