EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005002662 (Gene tree)
Gene ID: 101478855
Gene Symbol: larsb
Alias: cb667|lars|wu:fb36b12
Full Name: leucyl-tRNA synthetase
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 22333 bases
Position: chrLG10:19450823-19473155
Accession: 101478855
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005003556	tRNA-synt_1g	PF09334.11	1.4e-17	1	2
ENSMZEP00005003556	tRNA-synt_1g	PF09334.11	1.4e-17	2	2
ENSMZEP00005003527	tRNA-synt_1g	PF09334.11	1.5e-17	1	2
ENSMZEP00005003527	tRNA-synt_1g	PF09334.11	1.5e-17	2	2
ENSMZEP00005003556	Anticodon_1	PF08264.13	3.7e-15	1	1
ENSMZEP00005003527	Anticodon_1	PF08264.13	3.8e-15	1	1
ENSMZEP00005003556	tRNA-synt_1	PF00133.22	6e-38	1	2
ENSMZEP00005003556	tRNA-synt_1	PF00133.22	6e-38	2	2
ENSMZEP00005003527	tRNA-synt_1	PF00133.22	1.1e-37	1	2
ENSMZEP00005003527	tRNA-synt_1	PF00133.22	1.1e-37	2	2
ENSMZEP00005003556	tRNA-synt_1e	PF01406.19	1.3e-06	1	1
ENSMZEP00005003527	tRNA-synt_1e	PF01406.19	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005003660	-	5051	XM_004550336	ENSMZEP00005003527	1184 (aa)	XP_004550393	UPI000D2FB604
ENSMZET00005003689	-	3534	-	ENSMZEP00005003556	1177 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005002662's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005002662's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005002662	larsb	100	78.463	ENSG00000133706	LARS	100	79.185	Homo_sapiens
ENSMZEG00005002662	larsb	100	93.423	ENSAPOG00000010585	larsb	100	93.929	Acanthochromis_polyacanthus
ENSMZEG00005002662	larsb	99	78.632	ENSAMEG00000017584	LARS	100	78.632	Ailuropoda_melanoleuca
ENSMZEG00005002662	larsb	100	93.676	ENSACIG00000014026	larsb	100	93.676	Amphilophus_citrinellus
ENSMZEG00005002662	larsb	100	94.257	ENSAOCG00000016931	larsb	100	94.257	Amphiprion_ocellaris
ENSMZEG00005002662	larsb	100	94.341	ENSAPEG00000017720	larsb	100	94.341	Amphiprion_percula
ENSMZEG00005002662	larsb	100	88.786	ENSATEG00000010441	larsb	99	89.191	Anabas_testudineus
ENSMZEG00005002662	larsb	97	78.998	ENSAPLG00000008145	LARS	100	79.174	Anas_platyrhynchos
ENSMZEG00005002662	larsb	100	77.703	ENSACAG00000013916	LARS	100	77.787	Anolis_carolinensis
ENSMZEG00005002662	larsb	100	70.270	ENSANAG00000014375	LARS	100	70.270	Aotus_nancymaae
ENSMZEG00005002662	larsb	100	99.916	ENSACLG00000010881	larsb	100	99.916	Astatotilapia_calliptera
ENSMZEG00005002662	larsb	100	86.835	ENSAMXG00000019979	larsb	100	86.835	Astyanax_mexicanus
ENSMZEG00005002662	larsb	100	77.449	ENSBTAG00000006765	LARS	100	77.449	Bos_taurus
ENSMZEG00005002662	larsb	99	55.631	WBGene00003073	lars-1	99	55.631	Caenorhabditis_elegans
ENSMZEG00005002662	larsb	100	78.463	ENSCJAG00000021314	LARS	100	79.097	Callithrix_jacchus
ENSMZEG00005002662	larsb	100	78.885	ENSCAFG00000006431	LARS	100	78.885	Canis_familiaris
ENSMZEG00005002662	larsb	99	78.934	ENSCAFG00020025009	LARS	99	78.934	Canis_lupus_dingo
ENSMZEG00005002662	larsb	100	77.703	ENSCHIG00000014949	LARS	100	77.703	Capra_hircus
ENSMZEG00005002662	larsb	100	77.872	ENSTSYG00000001253	LARS	100	77.872	Carlito_syrichta
ENSMZEG00005002662	larsb	96	61.876	ENSCAPG00000015676	LARS	97	62.051	Cavia_aperea
ENSMZEG00005002662	larsb	100	76.774	ENSCPOG00000012329	LARS	100	76.774	Cavia_porcellus
ENSMZEG00005002662	larsb	100	78.716	ENSCCAG00000020789	LARS	100	78.716	Cebus_capucinus
ENSMZEG00005002662	larsb	97	78.764	ENSCATG00000033463	LARS	100	79.097	Cercocebus_atys
ENSMZEG00005002662	larsb	100	77.365	ENSCLAG00000011193	LARS	100	77.365	Chinchilla_lanigera
ENSMZEG00005002662	larsb	99	78.480	ENSCSAG00000012280	LARS	97	78.480	Chlorocebus_sabaeus
ENSMZEG00005002662	larsb	90	72.067	ENSCHOG00000009309	LARS	90	72.067	Choloepus_hoffmanni
ENSMZEG00005002662	larsb	99	79.797	ENSCPBG00000008415	LARS	99	80.987	Chrysemys_picta_bellii
ENSMZEG00005002662	larsb	98	65.082	ENSCING00000008535	-	98	64.391	Ciona_intestinalis
ENSMZEG00005002662	larsb	99	63.421	ENSCSAVG00000009040	-	100	68.081	Ciona_savignyi
ENSMZEG00005002662	larsb	100	78.632	ENSCANG00000031137	LARS	100	78.632	Colobus_angolensis_palliatus
ENSMZEG00005002662	larsb	93	73.430	ENSCGRG00001004647	Lars	99	73.430	Cricetulus_griseus_chok1gshd
ENSMZEG00005002662	larsb	100	75.021	ENSCGRG00000007284	Lars	100	75.021	Cricetulus_griseus_crigri
ENSMZEG00005002662	larsb	100	91.821	ENSCSEG00000014984	larsb	100	91.821	Cynoglossus_semilaevis
ENSMZEG00005002662	larsb	100	93.412	ENSCVAG00000014685	larsb	100	93.412	Cyprinodon_variegatus
ENSMZEG00005002662	larsb	68	87.860	ENSDARG00000019280	larsb	100	87.860	Danio_rerio
ENSMZEG00005002662	larsb	97	77.564	ENSDNOG00000017963	LARS	100	78.098	Dasypus_novemcinctus
ENSMZEG00005002662	larsb	100	73.187	ENSDORG00000014913	Lars	100	73.187	Dipodomys_ordii
ENSMZEG00005002662	larsb	99	58.629	FBgn0284253	LeuRS	99	59.052	Drosophila_melanogaster
ENSMZEG00005002662	larsb	94	63.375	ENSETEG00000003145	LARS	100	63.375	Echinops_telfairi
ENSMZEG00005002662	larsb	92	60.074	ENSEBUG00000014985	larsb	97	60.074	Eptatretus_burgeri
ENSMZEG00005002662	larsb	100	78.378	ENSEASG00005020569	LARS	100	78.696	Equus_asinus_asinus
ENSMZEG00005002662	larsb	100	78.294	ENSECAG00000008963	LARS	100	79.097	Equus_caballus
ENSMZEG00005002662	larsb	92	62.350	ENSEEUG00000014854	LARS	92	62.350	Erinaceus_europaeus
ENSMZEG00005002662	larsb	100	86.571	ENSELUG00000023311	larsb	100	86.571	Esox_lucius
ENSMZEG00005002662	larsb	99	78.511	ENSFCAG00000008715	LARS	100	79.794	Felis_catus
ENSMZEG00005002662	larsb	100	79.072	ENSFALG00000003209	LARS	93	79.072	Ficedula_albicollis
ENSMZEG00005002662	larsb	100	77.111	ENSFDAG00000020764	LARS	100	77.027	Fukomys_damarensis
ENSMZEG00005002662	larsb	91	92.181	ENSFHEG00000010437	larsb	100	92.181	Fundulus_heteroclitus
ENSMZEG00005002662	larsb	99	87.479	ENSGMOG00000013645	larsb	99	87.479	Gadus_morhua
ENSMZEG00005002662	larsb	100	79.764	ENSGALG00000007494	LARS	100	79.764	Gallus_gallus
ENSMZEG00005002662	larsb	100	92.652	ENSGAFG00000005029	larsb	100	92.652	Gambusia_affinis
ENSMZEG00005002662	larsb	99	90.700	ENSGACG00000020720	larsb	99	90.700	Gasterosteus_aculeatus
ENSMZEG00005002662	larsb	99	79.036	ENSGAGG00000002353	LARS	99	79.036	Gopherus_agassizii
ENSMZEG00005002662	larsb	100	78.378	ENSGGOG00000004103	LARS	100	78.378	Gorilla_gorilla
ENSMZEG00005002662	larsb	100	98.131	ENSHBUG00000003051	larsb	100	99.637	Haplochromis_burtoni
ENSMZEG00005002662	larsb	100	77.365	ENSHGLG00000006937	LARS	100	77.365	Heterocephalus_glaber_female
ENSMZEG00005002662	larsb	100	77.365	ENSHGLG00100002801	LARS	100	77.365	Heterocephalus_glaber_male
ENSMZEG00005002662	larsb	99	91.209	ENSHCOG00000003651	larsb	100	91.209	Hippocampus_comes
ENSMZEG00005002662	larsb	99	85.934	ENSIPUG00000010756	lars	100	86.094	Ictalurus_punctatus
ENSMZEG00005002662	larsb	100	77.787	ENSSTOG00000002356	LARS	100	77.787	Ictidomys_tridecemlineatus
ENSMZEG00005002662	larsb	100	77.027	ENSJJAG00000015265	Lars	100	77.027	Jaculus_jaculus
ENSMZEG00005002662	larsb	100	93.502	ENSKMAG00000009903	larsb	100	93.586	Kryptolebias_marmoratus
ENSMZEG00005002662	larsb	100	92.827	ENSLBEG00000025237	larsb	100	92.827	Labrus_bergylta
ENSMZEG00005002662	larsb	100	79.209	ENSLACG00000009321	LARS	100	79.630	Latimeria_chalumnae
ENSMZEG00005002662	larsb	99	83.447	ENSLOCG00000010442	larsb	100	83.094	Lepisosteus_oculatus
ENSMZEG00005002662	larsb	99	78.041	ENSLAFG00000000318	LARS	100	78.003	Loxodonta_africana
ENSMZEG00005002662	larsb	100	78.547	ENSMFAG00000038685	LARS	100	78.547	Macaca_fascicularis
ENSMZEG00005002662	larsb	100	78.547	ENSMMUG00000029787	LARS	100	78.547	Macaca_mulatta
ENSMZEG00005002662	larsb	99	76.734	ENSMNEG00000044014	LARS	99	76.734	Macaca_nemestrina
ENSMZEG00005002662	larsb	99	78.596	ENSMLEG00000037563	LARS	99	78.596	Mandrillus_leucophaeus
ENSMZEG00005002662	larsb	100	93.919	ENSMAMG00000021385	larsb	100	93.919	Mastacembelus_armatus
ENSMZEG00005002662	larsb	97	80.228	ENSMGAG00000009388	LARS	100	80.228	Meleagris_gallopavo
ENSMZEG00005002662	larsb	99	67.851	ENSMAUG00000003063	Lars	95	73.333	Mesocricetus_auratus
ENSMZEG00005002662	larsb	100	65.034	ENSMICG00000035435	-	100	65.034	Microcebus_murinus
ENSMZEG00005002662	larsb	100	78.632	ENSMICG00000035589	-	100	78.632	Microcebus_murinus
ENSMZEG00005002662	larsb	100	76.793	ENSMOCG00000002092	Lars	100	76.793	Microtus_ochrogaster
ENSMZEG00005002662	larsb	100	89.085	ENSMMOG00000013802	larsb	100	89.085	Mola_mola
ENSMZEG00005002662	larsb	99	72.387	ENSMODG00000010231	LARS	99	72.387	Monodelphis_domestica
ENSMZEG00005002662	larsb	99	90.508	ENSMALG00000018444	larsb	99	90.508	Monopterus_albus
ENSMZEG00005002662	larsb	100	77.046	MGP_CAROLIEiJ_G0022225	Lars	100	77.046	Mus_caroli
ENSMZEG00005002662	larsb	100	76.709	ENSMUSG00000024493	Lars	100	76.709	Mus_musculus
ENSMZEG00005002662	larsb	100	76.878	MGP_PahariEiJ_G0018958	Lars	100	76.878	Mus_pahari
ENSMZEG00005002662	larsb	100	77.046	MGP_SPRETEiJ_G0023135	Lars	100	77.046	Mus_spretus
ENSMZEG00005002662	larsb	100	78.547	ENSMPUG00000007844	LARS	100	78.547	Mustela_putorius_furo
ENSMZEG00005002662	larsb	99	77.599	ENSMLUG00000001125	LARS	100	77.599	Myotis_lucifugus
ENSMZEG00005002662	larsb	100	76.436	ENSNGAG00000011596	Lars	100	76.436	Nannospalax_galili
ENSMZEG00005002662	larsb	100	98.902	ENSNBRG00000005764	larsb	100	98.902	Neolamprologus_brichardi
ENSMZEG00005002662	larsb	99	78.173	ENSNLEG00000009816	LARS	99	78.173	Nomascus_leucogenys
ENSMZEG00005002662	larsb	53	81.081	ENSMEUG00000002332	-	60	75.261	Notamacropus_eugenii
ENSMZEG00005002662	larsb	78	81.720	ENSOPRG00000003076	LARS	83	81.720	Ochotona_princeps
ENSMZEG00005002662	larsb	99	75.127	ENSODEG00000004882	LARS	100	75.127	Octodon_degus
ENSMZEG00005002662	larsb	100	98.564	ENSONIG00000008493	larsb	100	98.564	Oreochromis_niloticus
ENSMZEG00005002662	larsb	100	76.198	ENSOANG00000005755	LARS	100	76.198	Ornithorhynchus_anatinus
ENSMZEG00005002662	larsb	100	78.125	ENSOCUG00000015684	LARS	100	78.125	Oryctolagus_cuniculus
ENSMZEG00005002662	larsb	100	92.399	ENSORLG00000001622	larsb	100	92.399	Oryzias_latipes
ENSMZEG00005002662	larsb	100	92.399	ENSORLG00020019950	larsb	100	92.399	Oryzias_latipes_hni
ENSMZEG00005002662	larsb	100	92.568	ENSORLG00015003895	larsb	100	92.568	Oryzias_latipes_hsok
ENSMZEG00005002662	larsb	100	92.483	ENSOMEG00000005677	larsb	100	92.483	Oryzias_melastigma
ENSMZEG00005002662	larsb	97	76.419	ENSOGAG00000008750	LARS	100	76.435	Otolemur_garnettii
ENSMZEG00005002662	larsb	99	77.515	ENSOARG00000002454	-	100	77.515	Ovis_aries
ENSMZEG00005002662	larsb	100	77.449	ENSOARG00000015911	-	99	77.449	Ovis_aries
ENSMZEG00005002662	larsb	99	78.426	ENSPPAG00000027964	LARS	99	78.426	Pan_paniscus
ENSMZEG00005002662	larsb	100	78.632	ENSPPRG00000023492	LARS	100	78.632	Panthera_pardus
ENSMZEG00005002662	larsb	100	78.547	ENSPTIG00000013110	LARS	100	78.547	Panthera_tigris_altaica
ENSMZEG00005002662	larsb	100	78.294	ENSPTRG00000017372	LARS	100	78.294	Pan_troglodytes
ENSMZEG00005002662	larsb	100	78.547	ENSPANG00000002663	LARS	100	78.547	Papio_anubis
ENSMZEG00005002662	larsb	98	84.456	ENSPKIG00000006650	larsb	99	82.103	Paramormyrops_kingsleyae
ENSMZEG00005002662	larsb	99	79.459	ENSPSIG00000015641	LARS	100	79.459	Pelodiscus_sinensis
ENSMZEG00005002662	larsb	68	93.875	ENSPMGG00000019556	LARS	100	93.875	Periophthalmus_magnuspinnatus
ENSMZEG00005002662	larsb	100	73.333	ENSPEMG00000010933	Lars	100	73.333	Peromyscus_maniculatus_bairdii
ENSMZEG00005002662	larsb	51	61.194	ENSPMAG00000005301	larsb	99	61.194	Petromyzon_marinus
ENSMZEG00005002662	larsb	100	76.605	ENSPCIG00000030572	LARS	100	76.605	Phascolarctos_cinereus
ENSMZEG00005002662	larsb	100	93.412	ENSPFOG00000002361	larsb	100	93.412	Poecilia_formosa
ENSMZEG00005002662	larsb	100	93.412	ENSPLAG00000016550	larsb	100	93.412	Poecilia_latipinna
ENSMZEG00005002662	larsb	100	93.243	ENSPMEG00000018422	larsb	100	93.243	Poecilia_mexicana
ENSMZEG00005002662	larsb	100	93.159	ENSPREG00000005668	larsb	100	93.159	Poecilia_reticulata
ENSMZEG00005002662	larsb	99	76.650	ENSPPYG00000015908	LARS	97	76.650	Pongo_abelii
ENSMZEG00005002662	larsb	89	68.750	ENSPCAG00000005621	LARS	96	65.388	Procavia_capensis
ENSMZEG00005002662	larsb	100	77.280	ENSPCOG00000019325	LARS	100	77.280	Propithecus_coquereli
ENSMZEG00005002662	larsb	97	69.947	ENSPVAG00000011237	LARS	100	70.341	Pteropus_vampyrus
ENSMZEG00005002662	larsb	100	99.493	ENSPNYG00000015254	larsb	100	99.493	Pundamilia_nyererei
ENSMZEG00005002662	larsb	100	85.389	ENSPNAG00000027191	larsb	100	85.389	Pygocentrus_nattereri
ENSMZEG00005002662	larsb	100	76.540	ENSRNOG00000018304	Lars	100	76.540	Rattus_norvegicus
ENSMZEG00005002662	larsb	94	77.469	ENSRBIG00000043198	LARS	99	77.469	Rhinopithecus_bieti
ENSMZEG00005002662	larsb	90	45.750	YPL160W	CDC60	99	45.966	Saccharomyces_cerevisiae
ENSMZEG00005002662	larsb	99	76.227	ENSSBOG00000026661	LARS	100	79.047	Saimiri_boliviensis_boliviensis
ENSMZEG00005002662	larsb	100	78.059	ENSSHAG00000006084	LARS	100	78.059	Sarcophilus_harrisii
ENSMZEG00005002662	larsb	97	84.878	ENSSFOG00015018117	larsb	90	84.907	Scleropages_formosus
ENSMZEG00005002662	larsb	88	93.864	ENSSMAG00000004078	larsb	97	94.056	Scophthalmus_maximus
ENSMZEG00005002662	larsb	100	94.510	ENSSDUG00000021142	larsb	100	94.510	Seriola_dumerili
ENSMZEG00005002662	larsb	100	94.679	ENSSLDG00000007054	larsb	100	94.679	Seriola_lalandi_dorsalis
ENSMZEG00005002662	larsb	85	71.429	ENSSARG00000013481	LARS	85	70.370	Sorex_araneus
ENSMZEG00005002662	larsb	100	78.921	ENSSPUG00000013805	LARS	100	79.174	Sphenodon_punctatus
ENSMZEG00005002662	larsb	100	94.172	ENSSPAG00000012124	larsb	100	94.172	Stegastes_partitus
ENSMZEG00005002662	larsb	100	75.169	ENSSSCG00000014411	LARS	100	75.169	Sus_scrofa
ENSMZEG00005002662	larsb	99	78.961	ENSTGUG00000000092	-	99	78.961	Taeniopygia_guttata
ENSMZEG00005002662	larsb	100	89.443	ENSTRUG00000005358	larsb	100	89.443	Takifugu_rubripes
ENSMZEG00005002662	larsb	99	85.811	ENSTNIG00000018214	larsb	100	85.835	Tetraodon_nigroviridis
ENSMZEG00005002662	larsb	91	75.494	ENSTBEG00000003757	LARS	94	75.494	Tupaia_belangeri
ENSMZEG00005002662	larsb	97	75.616	ENSTTRG00000016712	LARS	96	75.635	Tursiops_truncatus
ENSMZEG00005002662	larsb	94	79.480	ENSUAMG00000019907	LARS	99	79.480	Ursus_americanus
ENSMZEG00005002662	larsb	100	78.547	ENSUMAG00000010585	LARS	100	78.547	Ursus_maritimus
ENSMZEG00005002662	larsb	92	78.356	ENSVPAG00000000557	LARS	92	78.356	Vicugna_pacos
ENSMZEG00005002662	larsb	100	78.885	ENSVVUG00000021124	LARS	100	78.885	Vulpes_vulpes
ENSMZEG00005002662	larsb	99	80.000	ENSXETG00000002320	lars	99	80.000	Xenopus_tropicalis
ENSMZEG00005002662	larsb	100	92.736	ENSXMAG00000001454	larsb	100	92.736	Xiphophorus_maculatus