EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005002850 (Gene tree)
Gene ID: 101487618
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 6899 bases
Position: chrLG2:25798284-25805182
Accession: 101487618
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005003690	Clp1	PF06807.14	2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005003843	-	3546	XM_004545479	ENSMZEP00005003690	441 (aa)	XP_004545536	UPI0003299F11

Gene Model

Click here to download ENSMZEG00005002850's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005002850's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005002850	clp1	99	75.172	ENSG00000172409	CLP1	99	75.638	Homo_sapiens
ENSMZEG00005002850	clp1	100	96.372	ENSAPOG00000008242	clp1	100	96.372	Acanthochromis_polyacanthus
ENSMZEG00005002850	clp1	99	74.943	ENSAMEG00000014551	CLP1	99	74.943	Ailuropoda_melanoleuca
ENSMZEG00005002850	clp1	100	98.413	ENSACIG00000006310	clp1	99	98.413	Amphilophus_citrinellus
ENSMZEG00005002850	clp1	100	96.825	ENSAOCG00000010681	clp1	100	96.825	Amphiprion_ocellaris
ENSMZEG00005002850	clp1	100	96.825	ENSAPEG00000012165	clp1	100	96.825	Amphiprion_percula
ENSMZEG00005002850	clp1	100	96.599	ENSATEG00000012374	clp1	100	96.599	Anabas_testudineus
ENSMZEG00005002850	clp1	98	75.231	ENSACAG00000007139	CLP1	99	75.231	Anolis_carolinensis
ENSMZEG00005002850	clp1	99	75.172	ENSANAG00000034935	CLP1	99	75.638	Aotus_nancymaae
ENSMZEG00005002850	clp1	100	100.000	ENSACLG00000013573	clp1	100	100.000	Astatotilapia_calliptera
ENSMZEG00005002850	clp1	95	87.972	ENSAMXG00000014194	clp1	98	87.972	Astyanax_mexicanus
ENSMZEG00005002850	clp1	98	75.174	ENSBTAG00000006493	CLP1	99	75.174	Bos_taurus
ENSMZEG00005002850	clp1	95	47.281	WBGene00010304	clpf-1	97	47.281	Caenorhabditis_elegans
ENSMZEG00005002850	clp1	99	75.172	ENSCJAG00000008748	CLP1	99	75.638	Callithrix_jacchus
ENSMZEG00005002850	clp1	98	75.174	ENSCAFG00000007815	CLP1	99	75.174	Canis_familiaris
ENSMZEG00005002850	clp1	98	75.174	ENSCAFG00020000903	CLP1	99	75.174	Canis_lupus_dingo
ENSMZEG00005002850	clp1	98	75.406	ENSCHIG00000023497	CLP1	99	75.406	Capra_hircus
ENSMZEG00005002850	clp1	99	75.172	ENSTSYG00000006824	CLP1	99	75.172	Carlito_syrichta
ENSMZEG00005002850	clp1	99	74.713	ENSCAPG00000009703	CLP1	99	74.713	Cavia_aperea
ENSMZEG00005002850	clp1	96	76.415	ENSCPOG00000012554	CLP1	99	76.415	Cavia_porcellus
ENSMZEG00005002850	clp1	99	74.943	ENSCCAG00000031957	CLP1	99	74.943	Cebus_capucinus
ENSMZEG00005002850	clp1	100	74.150	ENSCATG00000044628	CLP1	99	75.638	Cercocebus_atys
ENSMZEG00005002850	clp1	98	75.406	ENSCLAG00000004094	CLP1	99	75.406	Chinchilla_lanigera
ENSMZEG00005002850	clp1	98	75.638	ENSCSAG00000005994	CLP1	99	75.638	Chlorocebus_sabaeus
ENSMZEG00005002850	clp1	98	74.769	ENSCPBG00000016843	CLP1	99	74.769	Chrysemys_picta_bellii
ENSMZEG00005002850	clp1	95	62.768	ENSCING00000003779	-	96	62.768	Ciona_intestinalis
ENSMZEG00005002850	clp1	95	62.919	ENSCSAVG00000003437	-	96	62.919	Ciona_savignyi
ENSMZEG00005002850	clp1	99	75.172	ENSCANG00000034335	CLP1	99	75.638	Colobus_angolensis_palliatus
ENSMZEG00005002850	clp1	98	74.769	ENSCGRG00001002227	CLP1	99	74.769	Cricetulus_griseus_chok1gshd
ENSMZEG00005002850	clp1	98	74.769	ENSCGRG00000004328	CLP1	99	74.769	Cricetulus_griseus_crigri
ENSMZEG00005002850	clp1	100	93.197	ENSCSEG00000008614	clp1	100	93.197	Cynoglossus_semilaevis
ENSMZEG00005002850	clp1	100	93.878	ENSCVAG00000020101	clp1	100	93.878	Cyprinodon_variegatus
ENSMZEG00005002850	clp1	100	83.184	ENSDARG00000063663	clp1	100	83.632	Danio_rerio
ENSMZEG00005002850	clp1	98	75.058	ENSDNOG00000042415	CLP1	90	75.058	Dasypus_novemcinctus
ENSMZEG00005002850	clp1	98	74.942	ENSDORG00000014685	Clp1	99	74.942	Dipodomys_ordii
ENSMZEG00005002850	clp1	95	54.306	FBgn0033842	cbc	97	54.306	Drosophila_melanogaster
ENSMZEG00005002850	clp1	98	75.406	ENSETEG00000003009	CLP1	99	75.406	Echinops_telfairi
ENSMZEG00005002850	clp1	98	64.269	ENSEBUG00000011648	clp1	99	64.269	Eptatretus_burgeri
ENSMZEG00005002850	clp1	98	75.638	ENSEASG00005002093	CLP1	99	75.638	Equus_asinus_asinus
ENSMZEG00005002850	clp1	99	75.402	ENSECAG00000011597	CLP1	99	75.638	Equus_caballus
ENSMZEG00005002850	clp1	96	75.708	ENSEEUG00000012771	CLP1	98	75.708	Erinaceus_europaeus
ENSMZEG00005002850	clp1	100	86.099	ENSELUG00000024048	clp1	100	86.099	Esox_lucius
ENSMZEG00005002850	clp1	99	74.943	ENSFCAG00000006633	CLP1	99	75.174	Felis_catus
ENSMZEG00005002850	clp1	98	75.231	ENSFALG00000011145	CLP1	99	75.231	Ficedula_albicollis
ENSMZEG00005002850	clp1	98	75.406	ENSFDAG00000000234	CLP1	99	75.406	Fukomys_damarensis
ENSMZEG00005002850	clp1	100	94.558	ENSFHEG00000014760	CLP1	100	94.558	Fundulus_heteroclitus
ENSMZEG00005002850	clp1	100	89.342	ENSGMOG00000019340	clp1	100	89.342	Gadus_morhua
ENSMZEG00005002850	clp1	98	75.000	ENSGALG00000007370	CLP1	99	75.000	Gallus_gallus
ENSMZEG00005002850	clp1	100	93.878	ENSGAFG00000003020	clp1	100	93.878	Gambusia_affinis
ENSMZEG00005002850	clp1	100	96.145	ENSGACG00000017832	clp1	100	96.145	Gasterosteus_aculeatus
ENSMZEG00005002850	clp1	98	74.769	ENSGAGG00000013279	CLP1	99	74.769	Gopherus_agassizii
ENSMZEG00005002850	clp1	99	75.172	ENSGGOG00000023006	CLP1	99	75.638	Gorilla_gorilla
ENSMZEG00005002850	clp1	100	99.773	ENSHBUG00000010436	clp1	100	99.773	Haplochromis_burtoni
ENSMZEG00005002850	clp1	98	75.406	ENSHGLG00000009914	CLP1	99	75.406	Heterocephalus_glaber_female
ENSMZEG00005002850	clp1	98	75.406	ENSHGLG00100006105	CLP1	99	75.406	Heterocephalus_glaber_male
ENSMZEG00005002850	clp1	100	94.558	ENSHCOG00000010072	clp1	100	94.558	Hippocampus_comes
ENSMZEG00005002850	clp1	100	83.296	ENSIPUG00000016238	clp1	99	83.296	Ictalurus_punctatus
ENSMZEG00005002850	clp1	98	75.406	ENSSTOG00000029257	CLP1	99	75.406	Ictidomys_tridecemlineatus
ENSMZEG00005002850	clp1	98	74.942	ENSJJAG00000023691	Clp1	99	74.942	Jaculus_jaculus
ENSMZEG00005002850	clp1	100	94.558	ENSKMAG00000011990	clp1	100	94.558	Kryptolebias_marmoratus
ENSMZEG00005002850	clp1	100	96.145	ENSLBEG00000010201	clp1	100	96.145	Labrus_bergylta
ENSMZEG00005002850	clp1	96	75.000	ENSLACG00000003160	CLP1	98	75.000	Latimeria_chalumnae
ENSMZEG00005002850	clp1	71	85.404	ENSLOCG00000008074	clp1	100	85.404	Lepisosteus_oculatus
ENSMZEG00005002850	clp1	98	75.174	ENSLAFG00000014907	CLP1	99	75.174	Loxodonta_africana
ENSMZEG00005002850	clp1	99	75.172	ENSMFAG00000046074	CLP1	99	75.638	Macaca_fascicularis
ENSMZEG00005002850	clp1	99	75.172	ENSMMUG00000038007	CLP1	99	75.172	Macaca_mulatta
ENSMZEG00005002850	clp1	98	75.638	ENSMNEG00000000259	CLP1	99	75.638	Macaca_nemestrina
ENSMZEG00005002850	clp1	99	75.172	ENSMLEG00000043556	CLP1	99	75.638	Mandrillus_leucophaeus
ENSMZEG00005002850	clp1	100	96.372	ENSMAMG00000002149	clp1	100	96.372	Mastacembelus_armatus
ENSMZEG00005002850	clp1	98	75.000	ENSMGAG00000009643	CLP1	99	75.000	Meleagris_gallopavo
ENSMZEG00005002850	clp1	98	74.769	ENSMAUG00000016261	Clp1	99	74.769	Mesocricetus_auratus
ENSMZEG00005002850	clp1	99	74.487	ENSMICG00000004895	CLP1	99	75.174	Microcebus_murinus
ENSMZEG00005002850	clp1	98	75.000	ENSMOCG00000005498	Clp1	99	75.000	Microtus_ochrogaster
ENSMZEG00005002850	clp1	100	94.785	ENSMMOG00000003229	clp1	100	94.785	Mola_mola
ENSMZEG00005002850	clp1	98	74.769	ENSMODG00000024148	-	99	74.769	Monodelphis_domestica
ENSMZEG00005002850	clp1	98	74.769	ENSMODG00000020107	-	99	74.769	Monodelphis_domestica
ENSMZEG00005002850	clp1	100	95.918	ENSMALG00000014239	clp1	100	95.918	Monopterus_albus
ENSMZEG00005002850	clp1	98	74.769	MGP_CAROLIEiJ_G0023726	Clp1	99	74.769	Mus_caroli
ENSMZEG00005002850	clp1	98	74.769	ENSMUSG00000027079	Clp1	99	74.769	Mus_musculus
ENSMZEG00005002850	clp1	98	74.537	MGP_PahariEiJ_G0025177	Clp1	99	74.537	Mus_pahari
ENSMZEG00005002850	clp1	98	74.769	MGP_SPRETEiJ_G0024646	Clp1	99	74.769	Mus_spretus
ENSMZEG00005002850	clp1	98	75.174	ENSMPUG00000000268	CLP1	99	75.174	Mustela_putorius_furo
ENSMZEG00005002850	clp1	99	75.172	ENSMLUG00000007904	CLP1	99	75.172	Myotis_lucifugus
ENSMZEG00005002850	clp1	98	74.942	ENSNGAG00000006165	Clp1	99	74.942	Nannospalax_galili
ENSMZEG00005002850	clp1	100	99.546	ENSNBRG00000005225	clp1	100	99.546	Neolamprologus_brichardi
ENSMZEG00005002850	clp1	80	70.196	ENSNLEG00000012809	-	99	70.196	Nomascus_leucogenys
ENSMZEG00005002850	clp1	98	74.654	ENSMEUG00000010949	CLP1	100	74.654	Notamacropus_eugenii
ENSMZEG00005002850	clp1	69	77.228	ENSOPRG00000007329	CLP1	100	77.228	Ochotona_princeps
ENSMZEG00005002850	clp1	98	75.406	ENSODEG00000011410	CLP1	99	75.406	Octodon_degus
ENSMZEG00005002850	clp1	100	99.546	ENSONIG00000005089	clp1	100	99.546	Oreochromis_niloticus
ENSMZEG00005002850	clp1	99	74.943	ENSOCUG00000007045	CLP1	99	74.943	Oryctolagus_cuniculus
ENSMZEG00005002850	clp1	100	94.558	ENSORLG00000003647	clp1	100	94.558	Oryzias_latipes
ENSMZEG00005002850	clp1	100	94.331	ENSORLG00020016676	clp1	100	94.331	Oryzias_latipes_hni
ENSMZEG00005002850	clp1	100	94.558	ENSORLG00015019484	clp1	100	94.558	Oryzias_latipes_hsok
ENSMZEG00005002850	clp1	100	94.104	ENSOMEG00000021303	clp1	100	94.104	Oryzias_melastigma
ENSMZEG00005002850	clp1	98	75.174	ENSOGAG00000004508	CLP1	99	75.174	Otolemur_garnettii
ENSMZEG00005002850	clp1	98	74.194	ENSOARG00000010145	CLP1	99	74.194	Ovis_aries
ENSMZEG00005002850	clp1	99	75.172	ENSPPAG00000041519	CLP1	99	75.638	Pan_paniscus
ENSMZEG00005002850	clp1	98	75.174	ENSPPRG00000006135	CLP1	99	75.174	Panthera_pardus
ENSMZEG00005002850	clp1	98	75.174	ENSPTIG00000015866	CLP1	99	75.174	Panthera_tigris_altaica
ENSMZEG00005002850	clp1	98	75.638	ENSPTRG00000047318	CLP1	99	75.638	Pan_troglodytes
ENSMZEG00005002850	clp1	99	75.172	ENSPANG00000017078	CLP1	98	75.172	Papio_anubis
ENSMZEG00005002850	clp1	100	84.944	ENSPKIG00000007697	clp1	100	84.944	Paramormyrops_kingsleyae
ENSMZEG00005002850	clp1	93	72.127	ENSPSIG00000005468	CLP1	99	72.127	Pelodiscus_sinensis
ENSMZEG00005002850	clp1	100	92.971	ENSPMGG00000012171	clp1	100	92.971	Periophthalmus_magnuspinnatus
ENSMZEG00005002850	clp1	98	75.000	ENSPEMG00000011213	-	99	75.000	Peromyscus_maniculatus_bairdii
ENSMZEG00005002850	clp1	95	67.221	ENSPMAG00000006707	clp1	97	67.221	Petromyzon_marinus
ENSMZEG00005002850	clp1	98	75.000	ENSPCIG00000011899	CLP1	99	75.000	Phascolarctos_cinereus
ENSMZEG00005002850	clp1	100	94.331	ENSPFOG00000008169	clp1	100	94.331	Poecilia_formosa
ENSMZEG00005002850	clp1	100	94.331	ENSPLAG00000022388	clp1	100	94.331	Poecilia_latipinna
ENSMZEG00005002850	clp1	100	94.331	ENSPMEG00000021088	clp1	100	94.331	Poecilia_mexicana
ENSMZEG00005002850	clp1	100	94.331	ENSPREG00000017802	clp1	100	94.331	Poecilia_reticulata
ENSMZEG00005002850	clp1	52	74.236	ENSPPYG00000003266	-	100	74.236	Pongo_abelii
ENSMZEG00005002850	clp1	99	74.943	ENSPCOG00000000360	CLP1	99	74.943	Propithecus_coquereli
ENSMZEG00005002850	clp1	98	75.174	ENSPVAG00000016270	CLP1	99	75.174	Pteropus_vampyrus
ENSMZEG00005002850	clp1	100	99.773	ENSPNYG00000017274	clp1	99	99.773	Pundamilia_nyererei
ENSMZEG00005002850	clp1	100	84.821	ENSPNAG00000026460	clp1	100	85.491	Pygocentrus_nattereri
ENSMZEG00005002850	clp1	98	74.769	ENSRNOG00000007416	Clp1	99	74.769	Rattus_norvegicus
ENSMZEG00005002850	clp1	98	75.638	ENSRBIG00000018191	CLP1	99	75.638	Rhinopithecus_bieti
ENSMZEG00005002850	clp1	99	75.172	ENSRROG00000039265	CLP1	99	75.638	Rhinopithecus_roxellana
ENSMZEG00005002850	clp1	98	75.638	ENSSBOG00000032517	-	99	75.638	Saimiri_boliviensis_boliviensis
ENSMZEG00005002850	clp1	94	62.077	ENSSBOG00000010558	-	93	62.077	Saimiri_boliviensis_boliviensis
ENSMZEG00005002850	clp1	98	75.000	ENSSHAG00000015695	CLP1	99	75.000	Sarcophilus_harrisii
ENSMZEG00005002850	clp1	100	83.885	ENSSFOG00015000628	clp1	100	84.768	Scleropages_formosus
ENSMZEG00005002850	clp1	100	96.372	ENSSMAG00000019423	clp1	99	96.372	Scophthalmus_maximus
ENSMZEG00005002850	clp1	100	97.052	ENSSDUG00000014495	clp1	100	97.052	Seriola_dumerili
ENSMZEG00005002850	clp1	100	96.825	ENSSLDG00000000937	clp1	100	96.825	Seriola_lalandi_dorsalis
ENSMZEG00005002850	clp1	52	74.123	ENSSARG00000002459	CLP1	100	74.123	Sorex_araneus
ENSMZEG00005002850	clp1	98	74.537	ENSSPUG00000016811	CLP1	99	74.537	Sphenodon_punctatus
ENSMZEG00005002850	clp1	100	96.599	ENSSPAG00000016052	clp1	100	96.599	Stegastes_partitus
ENSMZEG00005002850	clp1	98	75.174	ENSSSCG00000031442	CLP1	99	75.174	Sus_scrofa
ENSMZEG00005002850	clp1	98	74.769	ENSTGUG00000007002	CLP1	99	74.769	Taeniopygia_guttata
ENSMZEG00005002850	clp1	100	92.290	ENSTRUG00000012602	clp1	100	92.290	Takifugu_rubripes
ENSMZEG00005002850	clp1	100	91.610	ENSTNIG00000013125	clp1	100	91.610	Tetraodon_nigroviridis
ENSMZEG00005002850	clp1	98	74.710	ENSTBEG00000009975	CLP1	99	74.710	Tupaia_belangeri
ENSMZEG00005002850	clp1	98	75.174	ENSTTRG00000002096	CLP1	99	75.174	Tursiops_truncatus
ENSMZEG00005002850	clp1	98	75.174	ENSUAMG00000011388	CLP1	99	75.174	Ursus_americanus
ENSMZEG00005002850	clp1	98	75.174	ENSUMAG00000018317	CLP1	99	75.174	Ursus_maritimus
ENSMZEG00005002850	clp1	100	74.150	ENSVVUG00000017138	CLP1	99	74.150	Vulpes_vulpes
ENSMZEG00005002850	clp1	100	69.752	ENSXETG00000007088	clp1	100	69.977	Xenopus_tropicalis
ENSMZEG00005002850	clp1	100	94.104	ENSXCOG00000002287	clp1	100	94.104	Xiphophorus_couchianus
ENSMZEG00005002850	clp1	100	94.104	ENSXMAG00000009783	clp1	100	94.104	Xiphophorus_maculatus