EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005003055 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: rbfox3
Full Name: -
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 74155 bases
Position: chrLG8:107659-181813
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005004009	Fox-1_C	PF12414.8	1.2e-19	1	1
ENSMZEP00005003979	Fox-1_C	PF12414.8	1.6e-16	1	1
ENSMZEP00005003979	RRM_1	PF00076.22	1.6e-18	1	1
ENSMZEP00005004009	RRM_1	PF00076.22	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005004141	-	1152	-	ENSMZEP00005003979	383 (aa)	-	-
ENSMZET00005004171	-	693	-	ENSMZEP00005004009	230 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005003055's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005003055's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005003055	-	59	89.630	ENSG00000167281	RBFOX3	99	55.125	Homo_sapiens
ENSMZEG00005003055	-	81	62.500	ENSAPOG00000021630	rbfox3b	83	62.202	Acanthochromis_polyacanthus
ENSMZEG00005003055	-	80	65.803	ENSAPOG00000015658	-	75	65.064	Acanthochromis_polyacanthus
ENSMZEG00005003055	-	74	66.551	ENSAMEG00000014170	RBFOX3	85	59.885	Ailuropoda_melanoleuca
ENSMZEG00005003055	-	90	75.410	ENSACIG00000003768	-	97	75.410	Amphilophus_citrinellus
ENSMZEG00005003055	-	66	81.646	ENSACIG00000010817	rbfox3b	91	65.461	Amphilophus_citrinellus
ENSMZEG00005003055	-	81	62.500	ENSAOCG00000012358	rbfox3b	83	62.500	Amphiprion_ocellaris
ENSMZEG00005003055	-	81	74.534	ENSAOCG00000010786	-	79	75.316	Amphiprion_ocellaris
ENSMZEG00005003055	-	81	65.495	ENSAPEG00000019081	rbfox3b	80	66.230	Amphiprion_percula
ENSMZEG00005003055	-	80	75.938	ENSAPEG00000015891	-	80	77.116	Amphiprion_percula
ENSMZEG00005003055	-	73	71.958	ENSATEG00000023101	-	94	64.286	Anabas_testudineus
ENSMZEG00005003055	-	54	88.000	ENSATEG00000019945	rbfox3b	69	69.030	Anabas_testudineus
ENSMZEG00005003055	-	58	90.299	ENSACAG00000016093	RBFOX3	84	60.542	Anolis_carolinensis
ENSMZEG00005003055	-	59	88.889	ENSANAG00000023457	RBFOX3	95	57.273	Aotus_nancymaae
ENSMZEG00005003055	-	81	63.174	ENSACLG00000020011	rbfox3b	92	62.342	Astatotilapia_calliptera
ENSMZEG00005003055	-	81	77.448	ENSACLG00000025552	-	83	77.448	Astatotilapia_calliptera
ENSMZEG00005003055	-	85	58.592	ENSAMXG00000042841	rbfox3b	91	57.746	Astyanax_mexicanus
ENSMZEG00005003055	-	53	90.984	ENSAMXG00000037246	rbfox3a	91	64.565	Astyanax_mexicanus
ENSMZEG00005003055	-	58	91.045	ENSBTAG00000006280	RBFOX3	78	60.312	Bos_taurus
ENSMZEG00005003055	-	54	88.710	ENSCJAG00000009563	RBFOX3	88	59.810	Callithrix_jacchus
ENSMZEG00005003055	-	59	89.630	ENSCAFG00000005547	RBFOX3	76	61.066	Canis_familiaris
ENSMZEG00005003055	-	59	89.630	ENSCAFG00020008126	RBFOX3	64	65.185	Canis_lupus_dingo
ENSMZEG00005003055	-	54	90.323	ENSCHIG00000009124	RBFOX3	64	64.815	Capra_hircus
ENSMZEG00005003055	-	54	88.800	ENSTSYG00000029617	RBFOX3	66	65.672	Carlito_syrichta
ENSMZEG00005003055	-	54	88.800	ENSCPOG00000021703	RBFOX3	66	64.815	Cavia_porcellus
ENSMZEG00005003055	-	59	88.889	ENSCCAG00000028450	RBFOX3	95	57.273	Cebus_capucinus
ENSMZEG00005003055	-	59	89.630	ENSCATG00000018349	RBFOX3	95	58.485	Cercocebus_atys
ENSMZEG00005003055	-	54	88.800	ENSCLAG00000006449	RBFOX3	66	65.185	Chinchilla_lanigera
ENSMZEG00005003055	-	59	89.630	ENSCSAG00000002355	RBFOX3	95	58.485	Chlorocebus_sabaeus
ENSMZEG00005003055	-	58	89.552	ENSCPBG00000010904	RBFOX3	92	60.502	Chrysemys_picta_bellii
ENSMZEG00005003055	-	59	89.630	ENSCANG00000043120	RBFOX3	95	58.485	Colobus_angolensis_palliatus
ENSMZEG00005003055	-	59	87.407	ENSCGRG00001019476	Rbfox3	66	65.185	Cricetulus_griseus_chok1gshd
ENSMZEG00005003055	-	59	87.407	ENSCGRG00000003268	Rbfox3	66	65.185	Cricetulus_griseus_crigri
ENSMZEG00005003055	-	61	77.305	ENSCSEG00000020606	RBFOX3	81	53.395	Cynoglossus_semilaevis
ENSMZEG00005003055	-	81	72.755	ENSCSEG00000015567	RBFOX3	81	73.065	Cynoglossus_semilaevis
ENSMZEG00005003055	-	80	62.798	ENSCVAG00000006882	rbfox3b	83	62.500	Cyprinodon_variegatus
ENSMZEG00005003055	-	66	81.529	ENSDARG00000074310	rbfox3b	96	70.588	Danio_rerio
ENSMZEG00005003055	-	53	90.984	ENSDARG00000010083	rbfox3a	92	64.865	Danio_rerio
ENSMZEG00005003055	-	54	88.800	ENSDNOG00000039391	RBFOX3	64	56.458	Dasypus_novemcinctus
ENSMZEG00005003055	-	53	91.736	ENSDORG00000005352	Rbfox3	63	54.647	Dipodomys_ordii
ENSMZEG00005003055	-	74	47.619	ENSEBUG00000013559	RBFOX3	74	47.811	Eptatretus_burgeri
ENSMZEG00005003055	-	59	83.704	ENSEBUG00000002129	RBFOX3	88	54.303	Eptatretus_burgeri
ENSMZEG00005003055	-	59	90.370	ENSEASG00005005059	RBFOX3	95	58.912	Equus_asinus_asinus
ENSMZEG00005003055	-	59	90.370	ENSECAG00000023811	RBFOX3	95	58.610	Equus_caballus
ENSMZEG00005003055	-	66	80.745	ENSELUG00000017963	rbfox3b	93	65.000	Esox_lucius
ENSMZEG00005003055	-	50	61.979	ENSELUG00000009807	-	70	53.383	Esox_lucius
ENSMZEG00005003055	-	59	90.370	ENSFCAG00000002555	RBFOX3	95	57.879	Felis_catus
ENSMZEG00005003055	-	76	55.963	ENSFALG00000012288	RBFOX3	83	56.395	Ficedula_albicollis
ENSMZEG00005003055	-	54	75.200	ENSFDAG00000007489	RBFOX3	64	62.593	Fukomys_damarensis
ENSMZEG00005003055	-	76	53.774	ENSFHEG00000008550	rbfox3b	95	51.829	Fundulus_heteroclitus
ENSMZEG00005003055	-	54	84.000	ENSGMOG00000019304	-	59	57.143	Gadus_morhua
ENSMZEG00005003055	-	58	91.045	ENSGALG00000032889	RBFOX3	84	61.631	Gallus_gallus
ENSMZEG00005003055	-	66	82.166	ENSGAFG00000005025	rbfox3b	81	61.801	Gambusia_affinis
ENSMZEG00005003055	-	54	87.903	ENSGACG00000002138	-	63	71.481	Gasterosteus_aculeatus
ENSMZEG00005003055	-	58	89.552	ENSGAGG00000020025	RBFOX3	92	60.502	Gopherus_agassizii
ENSMZEG00005003055	-	59	89.630	ENSGGOG00000012546	RBFOX3	99	57.349	Gorilla_gorilla
ENSMZEG00005003055	-	81	63.174	ENSHBUG00000018099	rbfox3b	83	62.575	Haplochromis_burtoni
ENSMZEG00005003055	-	81	78.466	ENSHBUG00000023098	-	73	99.052	Haplochromis_burtoni
ENSMZEG00005003055	-	54	88.800	ENSHGLG00000008679	RBFOX3	65	65.185	Heterocephalus_glaber_female
ENSMZEG00005003055	-	54	80.952	ENSHGLG00100014739	RBFOX3	80	62.593	Heterocephalus_glaber_male
ENSMZEG00005003055	-	87	66.366	ENSHCOG00000001863	RBFOX3	100	65.982	Hippocampus_comes
ENSMZEG00005003055	-	54	87.903	ENSHCOG00000007444	RBFOX3	66	59.441	Hippocampus_comes
ENSMZEG00005003055	-	53	90.984	ENSIPUG00000012010	rbfox3a	91	62.462	Ictalurus_punctatus
ENSMZEG00005003055	-	54	86.290	ENSIPUG00000021966	rbfox3b	92	64.260	Ictalurus_punctatus
ENSMZEG00005003055	-	54	88.800	ENSJJAG00000014167	Rbfox3	66	65.556	Jaculus_jaculus
ENSMZEG00005003055	-	66	82.166	ENSKMAG00000006726	rbfox3b	83	62.500	Kryptolebias_marmoratus
ENSMZEG00005003055	-	81	70.833	ENSLBEG00000022508	-	90	72.256	Labrus_bergylta
ENSMZEG00005003055	-	66	81.646	ENSLBEG00000004030	rbfox3b	91	65.461	Labrus_bergylta
ENSMZEG00005003055	-	72	67.260	ENSLACG00000018409	-	91	58.197	Latimeria_chalumnae
ENSMZEG00005003055	-	72	72.500	ENSLOCG00000012267	rbfox3a	91	67.576	Lepisosteus_oculatus
ENSMZEG00005003055	-	54	90.323	ENSLAFG00000016623	RBFOX3	83	62.575	Loxodonta_africana
ENSMZEG00005003055	-	54	89.516	ENSMFAG00000002247	RBFOX3	67	65.556	Macaca_fascicularis
ENSMZEG00005003055	-	59	89.630	ENSMMUG00000023028	RBFOX3	95	58.485	Macaca_mulatta
ENSMZEG00005003055	-	59	89.630	ENSMNEG00000041147	RBFOX3	95	58.485	Macaca_nemestrina
ENSMZEG00005003055	-	59	89.630	ENSMLEG00000025686	RBFOX3	95	58.485	Mandrillus_leucophaeus
ENSMZEG00005003055	-	66	82.166	ENSMAMG00000019810	rbfox3b	90	61.589	Mastacembelus_armatus
ENSMZEG00005003055	-	79	71.914	ENSMAMG00000020600	-	91	68.713	Mastacembelus_armatus
ENSMZEG00005003055	-	81	63.174	ENSMZEG00005000781	rbfox3b	83	62.275	Maylandia_zebra
ENSMZEG00005003055	-	53	76.098	ENSMGAG00000005600	RBFOX3	77	77.073	Meleagris_gallopavo
ENSMZEG00005003055	-	59	88.148	ENSMAUG00000013543	Rbfox3	66	64.444	Mesocricetus_auratus
ENSMZEG00005003055	-	54	88.800	ENSMICG00000014898	RBFOX3	95	57.576	Microcebus_murinus
ENSMZEG00005003055	-	59	88.148	ENSMOCG00000015373	Rbfox3	66	65.926	Microtus_ochrogaster
ENSMZEG00005003055	-	74	68.905	ENSMMOG00000020193	rbfox3b	80	62.733	Mola_mola
ENSMZEG00005003055	-	58	90.299	ENSMODG00000002089	RBFOX3	83	60.725	Monodelphis_domestica
ENSMZEG00005003055	-	81	61.905	ENSMALG00000020407	rbfox3b	83	61.905	Monopterus_albus
ENSMZEG00005003055	-	78	73.822	ENSMALG00000018270	-	99	67.359	Monopterus_albus
ENSMZEG00005003055	-	59	87.407	MGP_CAROLIEiJ_G0017487	Rbfox3	92	88.060	Mus_caroli
ENSMZEG00005003055	-	59	87.407	ENSMUSG00000025576	Rbfox3	92	88.060	Mus_musculus
ENSMZEG00005003055	-	59	88.148	MGP_PahariEiJ_G0018614	Rbfox3	92	88.806	Mus_pahari
ENSMZEG00005003055	-	59	87.407	MGP_SPRETEiJ_G0018331	Rbfox3	92	88.060	Mus_spretus
ENSMZEG00005003055	-	74	64.883	ENSMPUG00000012319	RBFOX3	92	58.496	Mustela_putorius_furo
ENSMZEG00005003055	-	59	88.889	ENSNGAG00000018006	Rbfox3	66	65.556	Nannospalax_galili
ENSMZEG00005003055	-	87	77.889	ENSNBRG00000022885	-	75	82.230	Neolamprologus_brichardi
ENSMZEG00005003055	-	82	62.130	ENSNBRG00000010102	rbfox3b	74	68.327	Neolamprologus_brichardi
ENSMZEG00005003055	-	50	72.680	ENSNLEG00000000153	-	69	72.680	Nomascus_leucogenys
ENSMZEG00005003055	-	53	75.207	ENSMEUG00000004218	-	66	45.318	Notamacropus_eugenii
ENSMZEG00005003055	-	66	77.326	ENSODEG00000009433	RBFOX3	95	59.091	Octodon_degus
ENSMZEG00005003055	-	80	63.095	ENSONIG00000009549	rbfox3b	83	62.798	Oreochromis_niloticus
ENSMZEG00005003055	-	81	78.994	ENSONIG00000007282	-	91	78.994	Oreochromis_niloticus
ENSMZEG00005003055	-	81	62.798	ENSORLG00000000905	rbfox3b	65	61.310	Oryzias_latipes
ENSMZEG00005003055	-	81	62.798	ENSORLG00020018030	rbfox3b	82	61.310	Oryzias_latipes_hni
ENSMZEG00005003055	-	81	62.500	ENSORLG00015009200	rbfox3b	89	56.757	Oryzias_latipes_hsok
ENSMZEG00005003055	-	53	89.344	ENSOMEG00000014677	rbfox3b	72	64.026	Oryzias_melastigma
ENSMZEG00005003055	-	58	90.299	ENSOGAG00000029595	RBFOX3	84	57.429	Otolemur_garnettii
ENSMZEG00005003055	-	60	56.223	ENSOARG00000002908	RBFOX3	83	49.697	Ovis_aries
ENSMZEG00005003055	-	59	89.630	ENSPPAG00000025383	RBFOX3	100	60.502	Pan_paniscus
ENSMZEG00005003055	-	54	89.600	ENSPPRG00000007819	RBFOX3	67	65.299	Panthera_pardus
ENSMZEG00005003055	-	59	89.630	ENSPTRG00000009727	RBFOX3	95	58.485	Pan_troglodytes
ENSMZEG00005003055	-	59	89.630	ENSPANG00000019837	RBFOX3	95	58.485	Papio_anubis
ENSMZEG00005003055	-	80	67.901	ENSPKIG00000010299	rbfox3a	88	66.269	Paramormyrops_kingsleyae
ENSMZEG00005003055	-	66	69.591	ENSPKIG00000022633	-	85	51.765	Paramormyrops_kingsleyae
ENSMZEG00005003055	-	54	87.200	ENSPMGG00000008000	rbfox3b	80	67.018	Periophthalmus_magnuspinnatus
ENSMZEG00005003055	-	59	88.148	ENSPEMG00000010500	Rbfox3	66	65.556	Peromyscus_maniculatus_bairdii
ENSMZEG00005003055	-	50	75.200	ENSPMAG00000008689	rbfox3b	92	45.498	Petromyzon_marinus
ENSMZEG00005003055	-	59	89.630	ENSPCIG00000005766	RBFOX3	95	49.240	Phascolarctos_cinereus
ENSMZEG00005003055	-	80	62.798	ENSPFOG00000018294	rbfox3b	80	62.500	Poecilia_formosa
ENSMZEG00005003055	-	66	82.166	ENSPLAG00000000481	rbfox3b	51	81.935	Poecilia_latipinna
ENSMZEG00005003055	-	76	53.459	ENSPMEG00000022997	rbfox3b	95	51.524	Poecilia_mexicana
ENSMZEG00005003055	-	81	62.611	ENSPREG00000012886	rbfox3b	86	62.952	Poecilia_reticulata
ENSMZEG00005003055	-	73	63.475	ENSPPYG00000008704	RBFOX3	84	58.991	Pongo_abelii
ENSMZEG00005003055	-	54	90.400	ENSPCAG00000001401	RBFOX3	66	64.552	Procavia_capensis
ENSMZEG00005003055	-	54	88.800	ENSPCOG00000012689	RBFOX3	66	64.552	Propithecus_coquereli
ENSMZEG00005003055	-	54	72.000	ENSPVAG00000015243	RBFOX3	66	60.448	Pteropus_vampyrus
ENSMZEG00005003055	-	53	89.256	ENSPNYG00000010414	rbfox3b	74	68.327	Pundamilia_nyererei
ENSMZEG00005003055	-	66	97.351	ENSPNYG00000009079	-	69	83.571	Pundamilia_nyererei
ENSMZEG00005003055	-	53	90.984	ENSPNAG00000002889	rbfox3a	83	64.118	Pygocentrus_nattereri
ENSMZEG00005003055	-	81	50.625	ENSPNAG00000018173	rbfox3b	88	50.000	Pygocentrus_nattereri
ENSMZEG00005003055	-	59	88.148	ENSRNOG00000003386	Rbfox3	95	59.215	Rattus_norvegicus
ENSMZEG00005003055	-	58	90.299	ENSRBIG00000040449	RBFOX3	84	60.542	Rhinopithecus_bieti
ENSMZEG00005003055	-	59	89.630	ENSRROG00000000766	RBFOX3	95	58.485	Rhinopithecus_roxellana
ENSMZEG00005003055	-	59	88.889	ENSSBOG00000031591	RBFOX3	95	57.273	Saimiri_boliviensis_boliviensis
ENSMZEG00005003055	-	79	61.721	ENSSHAG00000016076	RBFOX3	95	49.240	Sarcophilus_harrisii
ENSMZEG00005003055	-	59	81.481	ENSSFOG00015004716	RBFOX3	85	56.667	Scleropages_formosus
ENSMZEG00005003055	-	53	92.623	ENSSFOG00015023260	rbfox3a	83	66.469	Scleropages_formosus
ENSMZEG00005003055	-	81	67.560	ENSSMAG00000019052	-	92	66.877	Scophthalmus_maximus
ENSMZEG00005003055	-	66	75.439	ENSSMAG00000012618	rbfox3b	73	59.207	Scophthalmus_maximus
ENSMZEG00005003055	-	76	53.774	ENSSDUG00000023183	rbfox3b	95	51.829	Seriola_dumerili
ENSMZEG00005003055	-	81	76.603	ENSSDUG00000015801	-	81	76.603	Seriola_dumerili
ENSMZEG00005003055	-	90	68.451	ENSSLDG00000016098	-	85	72.537	Seriola_lalandi_dorsalis
ENSMZEG00005003055	-	81	62.798	ENSSLDG00000000149	rbfox3b	83	62.798	Seriola_lalandi_dorsalis
ENSMZEG00005003055	-	59	91.111	ENSSPUG00000011733	RBFOX3	91	60.625	Sphenodon_punctatus
ENSMZEG00005003055	-	81	64.596	ENSSPAG00000017571	rbfox3b	81	64.286	Stegastes_partitus
ENSMZEG00005003055	-	71	67.213	ENSSPAG00000004898	-	90	64.024	Stegastes_partitus
ENSMZEG00005003055	-	59	90.370	ENSSSCG00000039498	RBFOX3	74	60.507	Sus_scrofa
ENSMZEG00005003055	-	54	88.710	ENSTRUG00000004894	rbfox3b	72	67.018	Takifugu_rubripes
ENSMZEG00005003055	-	89	57.951	ENSTNIG00000011278	rbfox3b	91	57.682	Tetraodon_nigroviridis
ENSMZEG00005003055	-	66	57.708	ENSTTRG00000003676	RBFOX3	66	58.955	Tursiops_truncatus
ENSMZEG00005003055	-	53	89.431	ENSUAMG00000004668	RBFOX3	95	58.788	Ursus_americanus
ENSMZEG00005003055	-	59	89.630	ENSVVUG00000017864	RBFOX3	95	58.182	Vulpes_vulpes
ENSMZEG00005003055	-	53	75.243	ENSXETG00000020236	rbfox3	82	55.325	Xenopus_tropicalis
ENSMZEG00005003055	-	68	77.301	ENSXCOG00000018262	rbfox3b	88	66.436	Xiphophorus_couchianus
ENSMZEG00005003055	-	81	62.798	ENSXMAG00000012939	rbfox3b	83	62.798	Xiphophorus_maculatus