EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005003112 (Gene tree)
Gene ID: 101471703
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 13053 bases
Position: chrLG15:33055825-33068877
Accession: 101471703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005004029	SMN	PF06003.12	6.9e-31	1	2
ENSMZEP00005004029	SMN	PF06003.12	6.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005004191	-	1505	XM_014413706	ENSMZEP00005004029	352 (aa)	XP_014269192	UPI000D314E55

Gene Model

Click here to download ENSMZEG00005003112's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005003112's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005003112	-	100	59.783	ENSAOCG00000006124	-	99	58.967	Amphiprion_ocellaris
ENSMZEG00005003112	-	100	54.076	ENSATEG00000005614	-	99	54.076	Anabas_testudineus
ENSMZEG00005003112	-	100	99.716	ENSACLG00000002833	-	100	99.716	Astatotilapia_calliptera
ENSMZEG00005003112	-	97	54.118	ENSMAMG00000016192	-	95	53.936	Mastacembelus_armatus
ENSMZEG00005003112	-	100	48.343	ENSMALG00000020522	-	99	47.934	Monopterus_albus
ENSMZEG00005003112	-	77	35.192	ENSPKIG00000003398	-	74	35.069	Paramormyrops_kingsleyae
ENSMZEG00005003112	-	51	47.170	ENSPSIG00000012459	-	99	39.394	Pelodiscus_sinensis
ENSMZEG00005003112	-	72	46.544	ENSPFOG00000022021	-	89	44.144	Poecilia_formosa
ENSMZEG00005003112	-	96	33.051	ENSSFOG00015022042	-	87	30.685	Scleropages_formosus
ENSMZEG00005003112	-	96	56.851	ENSSDUG00000020881	-	99	55.827	Seriola_dumerili
ENSMZEG00005003112	-	94	57.270	ENSSLDG00000013900	-	95	55.432	Seriola_lalandi_dorsalis