EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005003185 (Gene tree)
Gene ID: 101476080
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 10645 bases
Position: chrLG15:225012-235656
Accession: 101476080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005004171	SAP	PF02037.27	3.3e-11	1	1
ENSMZEP00005004157	SAP	PF02037.27	3.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005004329	-	5739	XM_004542297	ENSMZEP00005004157	798 (aa)	XP_004542354	UPI000329B6BC
ENSMZET00005004344	-	2334	-	ENSMZEP00005004171	777 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005003185's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005003185's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005003185	hnrnpub	85	83.333	ENSG00000153187	HNRNPU	99	64.667	Homo_sapiens
ENSMZEG00005003185	hnrnpub	100	86.121	ENSAPOG00000017400	hnrnpub	100	85.608	Acanthochromis_polyacanthus
ENSMZEG00005003185	hnrnpub	85	83.333	ENSAMEG00000009145	HNRNPU	76	83.333	Ailuropoda_melanoleuca
ENSMZEG00005003185	hnrnpub	100	84.724	ENSACIG00000012138	hnrnpub	96	91.191	Amphilophus_citrinellus
ENSMZEG00005003185	hnrnpub	100	87.856	ENSAOCG00000015843	hnrnpub	100	86.849	Amphiprion_ocellaris
ENSMZEG00005003185	hnrnpub	100	87.856	ENSAPEG00000014679	hnrnpub	100	86.849	Amphiprion_percula
ENSMZEG00005003185	hnrnpub	98	87.218	ENSATEG00000016178	hnrnpub	97	85.804	Anabas_testudineus
ENSMZEG00005003185	hnrnpub	86	73.810	ENSACAG00000004511	HNRNPU	77	73.810	Anolis_carolinensis
ENSMZEG00005003185	hnrnpub	99	53.446	ENSANAG00000033895	-	80	83.333	Aotus_nancymaae
ENSMZEG00005003185	hnrnpub	100	99.871	ENSACLG00000008165	hnrnpub	100	99.871	Astatotilapia_calliptera
ENSMZEG00005003185	hnrnpub	85	83.333	ENSBTAG00000007606	HNRNPU	78	83.333	Bos_taurus
ENSMZEG00005003185	hnrnpub	85	83.333	ENSCJAG00000016914	HNRNPU	78	83.333	Callithrix_jacchus
ENSMZEG00005003185	hnrnpub	80	57.590	ENSCAFG00020000918	HNRNPU	74	59.236	Canis_lupus_dingo
ENSMZEG00005003185	hnrnpub	80	57.590	ENSCHIG00000004900	HNRNPU	80	83.333	Capra_hircus
ENSMZEG00005003185	hnrnpub	85	85.714	ENSCPOG00000011887	HNRNPU	78	85.714	Cavia_porcellus
ENSMZEG00005003185	hnrnpub	85	83.333	ENSCCAG00000037859	-	78	83.333	Cebus_capucinus
ENSMZEG00005003185	hnrnpub	85	83.333	ENSCATG00000035273	HNRNPU	78	83.333	Cercocebus_atys
ENSMZEG00005003185	hnrnpub	85	85.714	ENSCLAG00000007100	HNRNPU	78	85.714	Chinchilla_lanigera
ENSMZEG00005003185	hnrnpub	80	57.254	ENSCSAG00000009219	HNRNPU	74	59.425	Chlorocebus_sabaeus
ENSMZEG00005003185	hnrnpub	85	83.333	ENSCHOG00000001387	HNRNPU	76	83.333	Choloepus_hoffmanni
ENSMZEG00005003185	hnrnpub	96	56.449	ENSCPBG00000009415	HNRNPU	79	66.102	Chrysemys_picta_bellii
ENSMZEG00005003185	hnrnpub	85	83.333	ENSCANG00000022780	HNRNPU	77	83.333	Colobus_angolensis_palliatus
ENSMZEG00005003185	hnrnpub	86	78.723	ENSCGRG00001020525	Hnrnpu	77	78.723	Cricetulus_griseus_chok1gshd
ENSMZEG00005003185	hnrnpub	100	77.485	ENSCSEG00000010804	hnrnpub	100	78.922	Cynoglossus_semilaevis
ENSMZEG00005003185	hnrnpub	90	81.481	ENSCVAG00000004280	hnrnpub	100	70.809	Cyprinodon_variegatus
ENSMZEG00005003185	hnrnpub	100	61.097	ENSDARG00000015206	hnrnpua	100	59.181	Danio_rerio
ENSMZEG00005003185	hnrnpub	100	60.749	ENSDARG00000004735	hnrnpub	100	56.766	Danio_rerio
ENSMZEG00005003185	hnrnpub	84	83.333	ENSDNOG00000000215	HNRNPU	88	83.333	Dasypus_novemcinctus
ENSMZEG00005003185	hnrnpub	78	58.926	ENSDORG00000015491	Hnrnpu	76	59.271	Dipodomys_ordii
ENSMZEG00005003185	hnrnpub	85	83.333	ENSETEG00000014565	HNRNPU	78	83.333	Echinops_telfairi
ENSMZEG00005003185	hnrnpub	81	57.385	ENSEASG00005003017	HNRNPU	74	59.554	Equus_asinus_asinus
ENSMZEG00005003185	hnrnpub	81	57.231	ENSECAG00000007955	HNRNPU	74	59.395	Equus_caballus
ENSMZEG00005003185	hnrnpub	100	72.695	ENSELUG00000010733	hnrnpub	100	72.706	Esox_lucius
ENSMZEG00005003185	hnrnpub	74	83.333	ENSFCAG00000002156	HNRNPU	77	83.333	Felis_catus
ENSMZEG00005003185	hnrnpub	94	60.526	ENSFDAG00000006026	HNRNPU	99	85.714	Fukomys_damarensis
ENSMZEG00005003185	hnrnpub	100	80.145	ENSFHEG00000022639	hnrnpub	100	80.508	Fundulus_heteroclitus
ENSMZEG00005003185	hnrnpub	100	72.169	ENSGMOG00000001755	hnrnpub	99	71.515	Gadus_morhua
ENSMZEG00005003185	hnrnpub	83	68.966	ENSGALG00000010671	HNRNPU	78	68.966	Gallus_gallus
ENSMZEG00005003185	hnrnpub	100	80.144	ENSGAFG00000009369	hnrnpub	100	79.712	Gambusia_affinis
ENSMZEG00005003185	hnrnpub	100	75.633	ENSGACG00000004679	hnrnpub	99	76.357	Gasterosteus_aculeatus
ENSMZEG00005003185	hnrnpub	85	83.333	ENSGGOG00000004061	HNRNPU	78	83.333	Gorilla_gorilla
ENSMZEG00005003185	hnrnpub	100	99.499	ENSHBUG00000012290	hnrnpub	100	99.499	Haplochromis_burtoni
ENSMZEG00005003185	hnrnpub	85	85.714	ENSHGLG00000010594	-	76	85.714	Heterocephalus_glaber_female
ENSMZEG00005003185	hnrnpub	92	85.714	ENSHGLG00100015093	HNRNPU	99	74.138	Heterocephalus_glaber_male
ENSMZEG00005003185	hnrnpub	85	77.697	ENSHCOG00000020091	hnrnpub	100	74.548	Hippocampus_comes
ENSMZEG00005003185	hnrnpub	82	91.304	ENSIPUG00000007749	hnrnpu	96	78.947	Ictalurus_punctatus
ENSMZEG00005003185	hnrnpub	86	78.723	ENSJJAG00000011371	Hnrnpu	79	78.723	Jaculus_jaculus
ENSMZEG00005003185	hnrnpub	100	82.274	ENSKMAG00000004532	hnrnpub	100	82.274	Kryptolebias_marmoratus
ENSMZEG00005003185	hnrnpub	100	83.374	ENSLBEG00000022520	hnrnpub	100	85.086	Labrus_bergylta
ENSMZEG00005003185	hnrnpub	99	50.971	ENSLACG00000017463	HNRNPU	80	82.609	Latimeria_chalumnae
ENSMZEG00005003185	hnrnpub	88	93.478	ENSLOCG00000016652	hnrnpua	78	93.478	Lepisosteus_oculatus
ENSMZEG00005003185	hnrnpub	85	83.333	ENSLAFG00000021377	HNRNPU	81	83.333	Loxodonta_africana
ENSMZEG00005003185	hnrnpub	85	83.333	ENSMFAG00000037308	HNRNPU	78	83.333	Macaca_fascicularis
ENSMZEG00005003185	hnrnpub	80	57.254	ENSMMUG00000021098	HNRNPU	75	59.425	Macaca_mulatta
ENSMZEG00005003185	hnrnpub	85	83.333	ENSMNEG00000043645	HNRNPU	78	83.333	Macaca_nemestrina
ENSMZEG00005003185	hnrnpub	100	87.005	ENSMAMG00000007196	hnrnpub	100	86.881	Mastacembelus_armatus
ENSMZEG00005003185	hnrnpub	88	78.723	ENSMAUG00000008842	Hnrnpu	82	78.723	Mesocricetus_auratus
ENSMZEG00005003185	hnrnpub	85	83.333	ENSMICG00000004616	HNRNPU	78	83.333	Microcebus_murinus
ENSMZEG00005003185	hnrnpub	88	78.723	ENSMOCG00000015623	Hnrnpu	79	78.723	Microtus_ochrogaster
ENSMZEG00005003185	hnrnpub	85	83.333	ENSMODG00000006515	HNRNPU	77	83.333	Monodelphis_domestica
ENSMZEG00005003185	hnrnpub	96	86.934	ENSMALG00000018243	hnrnpub	98	86.122	Monopterus_albus
ENSMZEG00005003185	hnrnpub	86	78.723	MGP_CAROLIEiJ_G0014962	Hnrnpu	81	78.723	Mus_caroli
ENSMZEG00005003185	hnrnpub	86	78.723	ENSMUSG00000039630	Hnrnpu	79	78.723	Mus_musculus
ENSMZEG00005003185	hnrnpub	86	78.723	MGP_PahariEiJ_G0028193	Hnrnpu	74	59.040	Mus_pahari
ENSMZEG00005003185	hnrnpub	86	78.723	MGP_SPRETEiJ_G0015761	Hnrnpu	73	60.065	Mus_spretus
ENSMZEG00005003185	hnrnpub	85	80.952	ENSMLUG00000000475	HNRNPU	81	77.083	Myotis_lucifugus
ENSMZEG00005003185	hnrnpub	80	56.079	ENSNGAG00000019075	Hnrnpu	73	60.131	Nannospalax_galili
ENSMZEG00005003185	hnrnpub	100	99.123	ENSNBRG00000017855	hnrnpub	100	99.123	Neolamprologus_brichardi
ENSMZEG00005003185	hnrnpub	78	83.333	ENSMEUG00000000541	HNRNPU	90	83.333	Notamacropus_eugenii
ENSMZEG00005003185	hnrnpub	100	95.363	ENSONIG00000001260	hnrnpub	100	95.363	Oreochromis_niloticus
ENSMZEG00005003185	hnrnpub	83	83.333	ENSOCUG00000014469	HNRNPU	69	83.333	Oryctolagus_cuniculus
ENSMZEG00005003185	hnrnpub	100	82.077	ENSORLG00000016114	hnrnpub	100	82.447	Oryzias_latipes
ENSMZEG00005003185	hnrnpub	100	81.289	ENSORLG00020005363	hnrnpub	100	82.818	Oryzias_latipes_hni
ENSMZEG00005003185	hnrnpub	100	81.165	ENSORLG00015001190	hnrnpub	100	82.695	Oryzias_latipes_hsok
ENSMZEG00005003185	hnrnpub	100	81.908	ENSOMEG00000014951	hnrnpub	100	82.200	Oryzias_melastigma
ENSMZEG00005003185	hnrnpub	99	52.550	ENSOGAG00000014024	HNRNPU	80	83.333	Otolemur_garnettii
ENSMZEG00005003185	hnrnpub	85	83.333	ENSOARG00000004985	HNRNPU	87	83.333	Ovis_aries
ENSMZEG00005003185	hnrnpub	85	83.333	ENSPPAG00000038652	HNRNPU	81	83.333	Pan_paniscus
ENSMZEG00005003185	hnrnpub	87	83.333	ENSPPRG00000002662	HNRNPU	78	83.333	Panthera_pardus
ENSMZEG00005003185	hnrnpub	85	83.333	ENSPTRG00000002182	HNRNPU	81	83.333	Pan_troglodytes
ENSMZEG00005003185	hnrnpub	80	57.254	ENSPANG00000011643	HNRNPU	79	60.413	Papio_anubis
ENSMZEG00005003185	hnrnpub	100	66.910	ENSPKIG00000006885	hnrnpua	100	65.249	Paramormyrops_kingsleyae
ENSMZEG00005003185	hnrnpub	100	68.606	ENSPKIG00000022332	hnrnpub	100	67.319	Paramormyrops_kingsleyae
ENSMZEG00005003185	hnrnpub	85	83.333	ENSPCIG00000008657	HNRNPU	77	83.333	Phascolarctos_cinereus
ENSMZEG00005003185	hnrnpub	100	81.585	ENSPFOG00000002908	hnrnpub	100	82.195	Poecilia_formosa
ENSMZEG00005003185	hnrnpub	100	81.098	ENSPLAG00000004160	hnrnpub	100	81.951	Poecilia_latipinna
ENSMZEG00005003185	hnrnpub	80	56.495	ENSPCOG00000003883	-	75	58.682	Propithecus_coquereli
ENSMZEG00005003185	hnrnpub	85	83.333	ENSPCOG00000018655	-	80	83.333	Propithecus_coquereli
ENSMZEG00005003185	hnrnpub	85	83.333	ENSPVAG00000002581	HNRNPU	78	83.333	Pteropus_vampyrus
ENSMZEG00005003185	hnrnpub	100	99.624	ENSPNYG00000021642	hnrnpub	100	99.624	Pundamilia_nyererei
ENSMZEG00005003185	hnrnpub	100	66.707	ENSPNAG00000001055	hnrnpub	100	66.135	Pygocentrus_nattereri
ENSMZEG00005003185	hnrnpub	76	59.706	ENSRNOG00000033790	Hnrnpu	74	59.455	Rattus_norvegicus
ENSMZEG00005003185	hnrnpub	80	56.630	ENSRBIG00000031519	HNRNPU	78	59.725	Rhinopithecus_bieti
ENSMZEG00005003185	hnrnpub	82	56.259	ENSRROG00000041642	HNRNPU	76	61.552	Rhinopithecus_roxellana
ENSMZEG00005003185	hnrnpub	100	65.860	ENSSFOG00015019004	hnrnpu	99	63.364	Scleropages_formosus
ENSMZEG00005003185	hnrnpub	100	67.515	ENSSFOG00015001124	hnrnpub	82	72.901	Scleropages_formosus
ENSMZEG00005003185	hnrnpub	100	80.856	ENSSMAG00000003607	hnrnpub	100	82.283	Scophthalmus_maximus
ENSMZEG00005003185	hnrnpub	100	87.010	ENSSDUG00000005912	hnrnpub	100	87.745	Seriola_dumerili
ENSMZEG00005003185	hnrnpub	100	86.691	ENSSLDG00000004899	hnrnpub	100	86.569	Seriola_lalandi_dorsalis
ENSMZEG00005003185	hnrnpub	87	82.927	ENSSPUG00000011393	HNRNPU	89	58.182	Sphenodon_punctatus
ENSMZEG00005003185	hnrnpub	100	87.097	ENSSPAG00000011853	hnrnpub	100	86.725	Stegastes_partitus
ENSMZEG00005003185	hnrnpub	85	83.333	ENSSSCG00000010877	HNRNPU	78	83.333	Sus_scrofa
ENSMZEG00005003185	hnrnpub	100	78.250	ENSTRUG00000007759	hnrnpub	100	79.243	Takifugu_rubripes
ENSMZEG00005003185	hnrnpub	100	72.816	ENSTNIG00000009725	hnrnpub	99	76.923	Tetraodon_nigroviridis
ENSMZEG00005003185	hnrnpub	85	83.333	ENSUAMG00000021120	HNRNPU	78	83.333	Ursus_americanus
ENSMZEG00005003185	hnrnpub	85	74.419	ENSUMAG00000012322	HNRNPU	84	74.419	Ursus_maritimus
ENSMZEG00005003185	hnrnpub	78	83.333	ENSVPAG00000010520	HNRNPU	81	83.333	Vicugna_pacos
ENSMZEG00005003185	hnrnpub	80	57.590	ENSVVUG00000026524	HNRNPU	74	59.236	Vulpes_vulpes
ENSMZEG00005003185	hnrnpub	99	51.355	ENSXETG00000011386	hnrnpu	99	53.056	Xenopus_tropicalis
ENSMZEG00005003185	hnrnpub	100	83.049	ENSXMAG00000010356	hnrnpub	100	83.537	Xiphophorus_maculatus