EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005003189 (Gene tree)
Gene ID: 101467203
Gene Symbol: rpp38 (1 of many)
Alias: fc10d08|wu:fc10d08|zgc:92924
Full Name: ribonuclease P protein subunit p38
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 795 bases
Position: chrAGTA05000027.1:573299-574093
Accession: 101467203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005004120	Ribosomal_L7Ae	PF01248.26	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005004291	-	795	XM_014412030	ENSMZEP00005004120	264 (aa)	XP_014267516	-

Gene Model

Click here to download ENSMZEG00005003189's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG
mze03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005003189's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005003189	rpp38	97	42.806	ENSG00000152464	RPP38	99	48.256	Homo_sapiens
ENSMZEG00005003189	rpp38	96	70.221	ENSAPOG00000001240	rpp38	95	68.635	Acanthochromis_polyacanthus
ENSMZEG00005003189	rpp38	97	44.000	ENSAMEG00000018832	RPP38	94	42.336	Ailuropoda_melanoleuca
ENSMZEG00005003189	rpp38	96	80.524	ENSACIG00000011592	rpp38	97	82.772	Amphilophus_citrinellus
ENSMZEG00005003189	rpp38	96	69.231	ENSAOCG00000017293	rpp38	96	67.606	Amphiprion_ocellaris
ENSMZEG00005003189	rpp38	96	72.761	ENSAPEG00000002315	rpp38	95	71.910	Amphiprion_percula
ENSMZEG00005003189	rpp38	99	75.093	ENSATEG00000000731	rpp38	97	71.648	Anabas_testudineus
ENSMZEG00005003189	rpp38	90	42.023	ENSAPLG00000002054	RPP38	90	41.634	Anas_platyrhynchos
ENSMZEG00005003189	rpp38	100	98.864	ENSACLG00000016958	rpp38	100	98.864	Astatotilapia_calliptera
ENSMZEG00005003189	rpp38	100	98.864	ENSACLG00000016962	rpp38	100	98.864	Astatotilapia_calliptera
ENSMZEG00005003189	rpp38	96	46.094	ENSAMXG00000025023	rpp38	93	45.312	Astyanax_mexicanus
ENSMZEG00005003189	rpp38	97	41.259	ENSBTAG00000007702	RPP38	74	47.945	Bos_taurus
ENSMZEG00005003189	rpp38	97	44.364	ENSCAFG00000024373	RPP38	74	49.289	Canis_familiaris
ENSMZEG00005003189	rpp38	97	44.364	ENSCAFG00020008008	RPP38	74	49.289	Canis_lupus_dingo
ENSMZEG00005003189	rpp38	97	42.086	ENSCHIG00000012484	RPP38	74	48.402	Capra_hircus
ENSMZEG00005003189	rpp38	97	44.406	ENSCPOG00000003981	RPP38	73	49.545	Cavia_porcellus
ENSMZEG00005003189	rpp38	97	44.245	ENSCLAG00000010194	RPP38	94	43.173	Chinchilla_lanigera
ENSMZEG00005003189	rpp38	94	41.971	ENSCSAG00000019055	RPP38	94	41.786	Chlorocebus_sabaeus
ENSMZEG00005003189	rpp38	97	44.245	ENSCHOG00000004335	RPP38	94	42.545	Choloepus_hoffmanni
ENSMZEG00005003189	rpp38	97	42.652	ENSCGRG00001001395	Rpp38	72	50.244	Cricetulus_griseus_chok1gshd
ENSMZEG00005003189	rpp38	97	42.652	ENSCGRG00000017441	Rpp38	72	50.244	Cricetulus_griseus_crigri
ENSMZEG00005003189	rpp38	96	67.954	ENSCSEG00000001721	rpp38	96	67.181	Cynoglossus_semilaevis
ENSMZEG00005003189	rpp38	96	62.132	ENSCVAG00000001676	rpp38	95	61.397	Cyprinodon_variegatus
ENSMZEG00005003189	rpp38	96	51.515	ENSDARG00000040350	rpp38	94	50.763	Danio_rerio
ENSMZEG00005003189	rpp38	97	43.116	ENSDNOG00000040314	RPP38	94	41.241	Dasypus_novemcinctus
ENSMZEG00005003189	rpp38	97	42.446	ENSDORG00000009783	Rpp38	93	41.636	Dipodomys_ordii
ENSMZEG00005003189	rpp38	97	41.544	ENSETEG00000002839	RPP38	72	47.087	Echinops_telfairi
ENSMZEG00005003189	rpp38	99	43.686	ENSEASG00005019783	RPP38	73	47.706	Equus_asinus_asinus
ENSMZEG00005003189	rpp38	99	39.510	ENSEEUG00000014677	RPP38	94	39.286	Erinaceus_europaeus
ENSMZEG00005003189	rpp38	95	55.363	ENSELUG00000010160	rpp38	96	54.671	Esox_lucius
ENSMZEG00005003189	rpp38	97	42.500	ENSFCAG00000022449	RPP38	94	41.241	Felis_catus
ENSMZEG00005003189	rpp38	90	44.788	ENSFALG00000014804	RPP38	88	42.636	Ficedula_albicollis
ENSMZEG00005003189	rpp38	97	43.816	ENSFDAG00000018669	RPP38	73	48.611	Fukomys_damarensis
ENSMZEG00005003189	rpp38	96	64.982	ENSFHEG00000013741	rpp38	96	65.942	Fundulus_heteroclitus
ENSMZEG00005003189	rpp38	91	42.912	ENSGALG00000008794	RPP38	86	41.762	Gallus_gallus
ENSMZEG00005003189	rpp38	59	81.761	ENSGACG00000009258	rpp38	99	81.761	Gasterosteus_aculeatus
ENSMZEG00005003189	rpp38	100	98.485	ENSHBUG00000010937	rpp38	100	98.485	Haplochromis_burtoni
ENSMZEG00005003189	rpp38	97	42.160	ENSHGLG00000012144	RPP38	73	48.341	Heterocephalus_glaber_female
ENSMZEG00005003189	rpp38	96	50.593	ENSIPUG00000022879	rpp38	95	48.263	Ictalurus_punctatus
ENSMZEG00005003189	rpp38	97	42.456	ENSSTOG00000025699	RPP38	72	47.926	Ictidomys_tridecemlineatus
ENSMZEG00005003189	rpp38	97	43.214	ENSJJAG00000007523	Rpp38	94	42.029	Jaculus_jaculus
ENSMZEG00005003189	rpp38	91	68.093	ENSKMAG00000003986	rpp38	90	68.482	Kryptolebias_marmoratus
ENSMZEG00005003189	rpp38	99	71.533	ENSLBEG00000006853	rpp38	96	72.075	Labrus_bergylta
ENSMZEG00005003189	rpp38	95	44.366	ENSLACG00000006502	RPP38	69	50.962	Latimeria_chalumnae
ENSMZEG00005003189	rpp38	99	46.996	ENSLOCG00000018347	rpp38	93	47.970	Lepisosteus_oculatus
ENSMZEG00005003189	rpp38	97	42.086	ENSLAFG00000000509	RPP38	73	46.190	Loxodonta_africana
ENSMZEG00005003189	rpp38	94	41.606	ENSMMUG00000007679	RPP38	94	41.429	Macaca_mulatta
ENSMZEG00005003189	rpp38	97	75.954	ENSMAMG00000012774	rpp38	95	75.686	Mastacembelus_armatus
ENSMZEG00005003189	rpp38	100	98.864	ENSMZEG00005003200	rpp38	100	98.864	Maylandia_zebra
ENSMZEG00005003189	rpp38	91	43.678	ENSMGAG00000008217	RPP38	86	42.146	Meleagris_gallopavo
ENSMZEG00005003189	rpp38	97	43.223	ENSMAUG00000003644	Rpp38	72	49.268	Mesocricetus_auratus
ENSMZEG00005003189	rpp38	97	41.516	ENSMOCG00000007020	Rpp38	72	47.826	Microtus_ochrogaster
ENSMZEG00005003189	rpp38	99	67.537	ENSMMOG00000003446	rpp38	96	67.308	Mola_mola
ENSMZEG00005003189	rpp38	95	41.481	ENSMODG00000024091	RPP38	94	41.852	Monodelphis_domestica
ENSMZEG00005003189	rpp38	98	74.170	ENSMALG00000002356	rpp38	96	73.585	Monopterus_albus
ENSMZEG00005003189	rpp38	97	43.525	MGP_CAROLIEiJ_G0023133	Rpp38	94	43.382	Mus_caroli
ENSMZEG00005003189	rpp38	97	43.165	ENSMUSG00000049950	Rpp38	94	43.015	Mus_musculus
ENSMZEG00005003189	rpp38	97	44.043	MGP_PahariEiJ_G0019193	Rpp38	94	43.382	Mus_pahari
ENSMZEG00005003189	rpp38	97	41.971	MGP_SPRETEiJ_G0024051	Rpp38	94	42.647	Mus_spretus
ENSMZEG00005003189	rpp38	97	44.203	ENSMPUG00000018523	RPP38	74	48.815	Mustela_putorius_furo
ENSMZEG00005003189	rpp38	75	49.048	ENSMLUG00000002153	RPP38	94	42.336	Myotis_lucifugus
ENSMZEG00005003189	rpp38	97	46.099	ENSNGAG00000011066	Rpp38	94	44.364	Nannospalax_galili
ENSMZEG00005003189	rpp38	99	98.479	ENSNBRG00000006994	rpp38	100	98.479	Neolamprologus_brichardi
ENSMZEG00005003189	rpp38	99	96.198	ENSONIG00000020467	rpp38	98	96.198	Oreochromis_niloticus
ENSMZEG00005003189	rpp38	94	41.481	ENSOCUG00000022768	-	94	42.007	Oryctolagus_cuniculus
ENSMZEG00005003189	rpp38	94	41.852	ENSOCUG00000024367	-	94	42.379	Oryctolagus_cuniculus
ENSMZEG00005003189	rpp38	96	70.943	ENSORLG00000009219	rpp38	95	68.939	Oryzias_latipes
ENSMZEG00005003189	rpp38	96	70.301	ENSORLG00020011503	rpp38	92	69.434	Oryzias_latipes_hni
ENSMZEG00005003189	rpp38	96	69.549	ENSORLG00015017702	rpp38	92	68.679	Oryzias_latipes_hsok
ENSMZEG00005003189	rpp38	89	69.076	ENSOMEG00000005414	rpp38	95	68.165	Oryzias_melastigma
ENSMZEG00005003189	rpp38	97	41.176	ENSOGAG00000008059	RPP38	72	48.826	Otolemur_garnettii
ENSMZEG00005003189	rpp38	97	41.379	ENSOARG00000004534	RPP38	94	41.429	Ovis_aries
ENSMZEG00005003189	rpp38	97	43.525	ENSPPAG00000041577	RPP38	86	43.728	Pan_paniscus
ENSMZEG00005003189	rpp38	97	43.214	ENSPPRG00000015329	RPP38	94	42.029	Panthera_pardus
ENSMZEG00005003189	rpp38	97	42.857	ENSPTIG00000007188	RPP38	94	41.667	Panthera_tigris_altaica
ENSMZEG00005003189	rpp38	97	43.525	ENSPTRG00000002318	RPP38	86	43.223	Pan_troglodytes
ENSMZEG00005003189	rpp38	93	48.276	ENSPKIG00000025652	rpp38	91	48.289	Paramormyrops_kingsleyae
ENSMZEG00005003189	rpp38	92	39.850	ENSPSIG00000001527	RPP38	90	39.080	Pelodiscus_sinensis
ENSMZEG00005003189	rpp38	97	43.116	ENSPEMG00000008375	Rpp38	94	42.804	Peromyscus_maniculatus_bairdii
ENSMZEG00005003189	rpp38	97	45.091	ENSPCIG00000009096	RPP38	89	45.018	Phascolarctos_cinereus
ENSMZEG00005003189	rpp38	75	64.216	ENSPFOG00000016823	rpp38	95	64.948	Poecilia_formosa
ENSMZEG00005003189	rpp38	99	60.993	ENSPLAG00000007626	rpp38	96	61.765	Poecilia_latipinna
ENSMZEG00005003189	rpp38	96	55.639	ENSPMEG00000020392	rpp38	96	56.015	Poecilia_mexicana
ENSMZEG00005003189	rpp38	93	64.151	ENSPREG00000017744	rpp38	92	64.706	Poecilia_reticulata
ENSMZEG00005003189	rpp38	97	42.652	ENSPPYG00000002113	RPP38	94	42.701	Pongo_abelii
ENSMZEG00005003189	rpp38	94	43.066	ENSPVAG00000007155	RPP38	94	42.349	Pteropus_vampyrus
ENSMZEG00005003189	rpp38	100	99.621	ENSPNYG00000004293	rpp38	100	99.621	Pundamilia_nyererei
ENSMZEG00005003189	rpp38	90	47.083	ENSPNAG00000010633	rpp38	94	46.484	Pygocentrus_nattereri
ENSMZEG00005003189	rpp38	97	45.865	ENSRNOG00000038025	Rpp38	94	45.802	Rattus_norvegicus
ENSMZEG00005003189	rpp38	97	41.091	ENSSHAG00000015529	RPP38	94	42.963	Sarcophilus_harrisii
ENSMZEG00005003189	rpp38	95	73.541	ENSSMAG00000018276	rpp38	91	70.683	Scophthalmus_maximus
ENSMZEG00005003189	rpp38	95	77.043	ENSSDUG00000001651	rpp38	96	76.265	Seriola_dumerili
ENSMZEG00005003189	rpp38	95	77.220	ENSSLDG00000014355	rpp38	96	76.062	Seriola_lalandi_dorsalis
ENSMZEG00005003189	rpp38	97	41.132	ENSSARG00000012099	RPP38	69	44.000	Sorex_araneus
ENSMZEG00005003189	rpp38	92	41.573	ENSSPUG00000008560	-	66	46.701	Sphenodon_punctatus
ENSMZEG00005003189	rpp38	92	45.318	ENSSPUG00000005237	-	67	51.269	Sphenodon_punctatus
ENSMZEG00005003189	rpp38	92	45.318	ENSSPUG00000018363	-	67	50.761	Sphenodon_punctatus
ENSMZEG00005003189	rpp38	96	70.656	ENSSPAG00000020387	rpp38	95	68.482	Stegastes_partitus
ENSMZEG00005003189	rpp38	99	40.893	ENSSSCG00000027110	RPP38	72	44.907	Sus_scrofa
ENSMZEG00005003189	rpp38	90	43.846	ENSTGUG00000001366	RPP38	90	42.366	Taeniopygia_guttata
ENSMZEG00005003189	rpp38	100	66.790	ENSTNIG00000001334	rpp38	97	67.308	Tetraodon_nigroviridis
ENSMZEG00005003189	rpp38	97	41.844	ENSTTRG00000004420	RPP38	94	40.357	Tursiops_truncatus
ENSMZEG00005003189	rpp38	99	43.972	ENSUAMG00000002618	RPP38	94	43.066	Ursus_americanus
ENSMZEG00005003189	rpp38	97	44.765	ENSUMAG00000012382	RPP38	94	43.772	Ursus_maritimus
ENSMZEG00005003189	rpp38	97	44.000	ENSVVUG00000005272	RPP38	74	48.815	Vulpes_vulpes
ENSMZEG00005003189	rpp38	89	40.711	ENSXETG00000003419	rpp38	89	40.711	Xenopus_tropicalis