EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005003200 (Gene tree)
Gene ID: 106674462
Gene Symbol: rpp38 (1 of many)
Alias: fc10d08|wu:fc10d08|zgc:92924
Full Name: ribonuclease P protein subunit p38
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 795 bases
Position: chrAGTA05000027.1:590083-590877
Accession: 106674462
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005004124	Ribosomal_L7Ae	PF01248.26	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005004295	-	795	XM_014409882	ENSMZEP00005004124	264 (aa)	XP_014265368	-

Gene Model

Click here to download ENSMZEG00005003200's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG
mze03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005003200's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005003200	rpp38	99	42.958	ENSG00000152464	RPP38	99	48.256	Homo_sapiens
ENSMZEG00005003200	rpp38	96	69.485	ENSAPOG00000001240	rpp38	95	67.897	Acanthochromis_polyacanthus
ENSMZEG00005003200	rpp38	97	43.636	ENSAMEG00000018832	RPP38	94	42.336	Ailuropoda_melanoleuca
ENSMZEG00005003200	rpp38	96	79.775	ENSACIG00000011592	rpp38	97	82.022	Amphilophus_citrinellus
ENSMZEG00005003200	rpp38	96	68.531	ENSAOCG00000017293	rpp38	96	66.901	Amphiprion_ocellaris
ENSMZEG00005003200	rpp38	96	72.015	ENSAPEG00000002315	rpp38	95	71.161	Amphiprion_percula
ENSMZEG00005003200	rpp38	99	74.349	ENSATEG00000000731	rpp38	97	70.881	Anabas_testudineus
ENSMZEG00005003200	rpp38	90	41.634	ENSAPLG00000002054	RPP38	90	41.245	Anas_platyrhynchos
ENSMZEG00005003200	rpp38	100	100.000	ENSACLG00000016958	rpp38	100	100.000	Astatotilapia_calliptera
ENSMZEG00005003200	rpp38	100	98.485	ENSACLG00000016962	rpp38	100	98.485	Astatotilapia_calliptera
ENSMZEG00005003200	rpp38	96	45.312	ENSAMXG00000025023	rpp38	93	44.531	Astyanax_mexicanus
ENSMZEG00005003200	rpp38	99	41.438	ENSBTAG00000007702	RPP38	74	47.945	Bos_taurus
ENSMZEG00005003200	rpp38	97	43.636	ENSCAFG00000024373	RPP38	74	48.815	Canis_familiaris
ENSMZEG00005003200	rpp38	97	43.636	ENSCAFG00020008008	RPP38	74	48.815	Canis_lupus_dingo
ENSMZEG00005003200	rpp38	99	41.901	ENSCHIG00000012484	RPP38	74	47.945	Capra_hircus
ENSMZEG00005003200	rpp38	99	44.521	ENSCPOG00000003981	RPP38	73	49.545	Cavia_porcellus
ENSMZEG00005003200	rpp38	99	44.366	ENSCLAG00000010194	RPP38	94	43.173	Chinchilla_lanigera
ENSMZEG00005003200	rpp38	94	41.971	ENSCSAG00000019055	RPP38	94	41.786	Chlorocebus_sabaeus
ENSMZEG00005003200	rpp38	99	44.366	ENSCHOG00000004335	RPP38	94	42.545	Choloepus_hoffmanni
ENSMZEG00005003200	rpp38	99	42.807	ENSCGRG00001001395	Rpp38	72	50.244	Cricetulus_griseus_chok1gshd
ENSMZEG00005003200	rpp38	99	42.807	ENSCGRG00000017441	Rpp38	72	50.244	Cricetulus_griseus_crigri
ENSMZEG00005003200	rpp38	96	67.181	ENSCSEG00000001721	rpp38	96	66.409	Cynoglossus_semilaevis
ENSMZEG00005003200	rpp38	96	61.397	ENSCVAG00000001676	rpp38	95	60.662	Cyprinodon_variegatus
ENSMZEG00005003200	rpp38	96	51.136	ENSDARG00000040350	rpp38	94	50.382	Danio_rerio
ENSMZEG00005003200	rpp38	99	43.262	ENSDNOG00000040314	RPP38	94	41.241	Dasypus_novemcinctus
ENSMZEG00005003200	rpp38	99	42.254	ENSDORG00000009783	Rpp38	93	41.264	Dipodomys_ordii
ENSMZEG00005003200	rpp38	99	41.727	ENSETEG00000002839	RPP38	72	47.087	Echinops_telfairi
ENSMZEG00005003200	rpp38	99	43.686	ENSEASG00005019783	RPP38	73	47.706	Equus_asinus_asinus
ENSMZEG00005003200	rpp38	99	39.161	ENSEEUG00000014677	RPP38	94	39.286	Erinaceus_europaeus
ENSMZEG00005003200	rpp38	95	54.671	ENSELUG00000010160	rpp38	96	53.979	Esox_lucius
ENSMZEG00005003200	rpp38	97	42.143	ENSFCAG00000022449	RPP38	94	41.241	Felis_catus
ENSMZEG00005003200	rpp38	90	44.402	ENSFALG00000014804	RPP38	88	42.248	Ficedula_albicollis
ENSMZEG00005003200	rpp38	99	43.945	ENSFDAG00000018669	RPP38	73	48.611	Fukomys_damarensis
ENSMZEG00005003200	rpp38	96	64.260	ENSFHEG00000013741	rpp38	96	65.217	Fundulus_heteroclitus
ENSMZEG00005003200	rpp38	91	42.529	ENSGALG00000008794	RPP38	86	41.379	Gallus_gallus
ENSMZEG00005003200	rpp38	59	81.132	ENSGACG00000009258	rpp38	99	81.132	Gasterosteus_aculeatus
ENSMZEG00005003200	rpp38	100	97.348	ENSHBUG00000010937	rpp38	100	97.348	Haplochromis_burtoni
ENSMZEG00005003200	rpp38	99	42.254	ENSHGLG00000012144	RPP38	73	47.867	Heterocephalus_glaber_female
ENSMZEG00005003200	rpp38	96	50.198	ENSIPUG00000022879	rpp38	95	47.876	Ictalurus_punctatus
ENSMZEG00005003200	rpp38	99	42.612	ENSSTOG00000025699	RPP38	72	47.926	Ictidomys_tridecemlineatus
ENSMZEG00005003200	rpp38	99	43.357	ENSJJAG00000007523	Rpp38	94	42.029	Jaculus_jaculus
ENSMZEG00005003200	rpp38	91	67.704	ENSKMAG00000003986	rpp38	90	68.093	Kryptolebias_marmoratus
ENSMZEG00005003200	rpp38	99	70.438	ENSLBEG00000006853	rpp38	96	71.321	Labrus_bergylta
ENSMZEG00005003200	rpp38	95	44.014	ENSLACG00000006502	RPP38	69	50.481	Latimeria_chalumnae
ENSMZEG00005003200	rpp38	99	46.996	ENSLOCG00000018347	rpp38	93	47.970	Lepisosteus_oculatus
ENSMZEG00005003200	rpp38	99	42.254	ENSLAFG00000000509	RPP38	73	46.190	Loxodonta_africana
ENSMZEG00005003200	rpp38	94	41.606	ENSMMUG00000007679	RPP38	94	41.429	Macaca_mulatta
ENSMZEG00005003200	rpp38	97	74.809	ENSMAMG00000012774	rpp38	95	74.902	Mastacembelus_armatus
ENSMZEG00005003200	rpp38	100	98.864	ENSMZEG00005003189	rpp38	100	98.864	Maylandia_zebra
ENSMZEG00005003200	rpp38	91	43.295	ENSMGAG00000008217	RPP38	86	41.762	Meleagris_gallopavo
ENSMZEG00005003200	rpp38	99	43.369	ENSMAUG00000003644	Rpp38	72	49.268	Mesocricetus_auratus
ENSMZEG00005003200	rpp38	99	41.696	ENSMOCG00000007020	Rpp38	72	47.826	Microtus_ochrogaster
ENSMZEG00005003200	rpp38	99	67.164	ENSMMOG00000003446	rpp38	96	67.308	Mola_mola
ENSMZEG00005003200	rpp38	95	41.111	ENSMODG00000024091	RPP38	94	41.481	Monodelphis_domestica
ENSMZEG00005003200	rpp38	98	73.063	ENSMALG00000002356	rpp38	96	72.830	Monopterus_albus
ENSMZEG00005003200	rpp38	97	43.165	MGP_CAROLIEiJ_G0023133	Rpp38	94	43.382	Mus_caroli
ENSMZEG00005003200	rpp38	97	42.806	ENSMUSG00000049950	Rpp38	94	43.015	Mus_musculus
ENSMZEG00005003200	rpp38	97	43.321	MGP_PahariEiJ_G0019193	Rpp38	94	43.015	Mus_pahari
ENSMZEG00005003200	rpp38	97	41.606	MGP_SPRETEiJ_G0024051	Rpp38	94	42.647	Mus_spretus
ENSMZEG00005003200	rpp38	97	43.841	ENSMPUG00000018523	RPP38	74	48.815	Mustela_putorius_furo
ENSMZEG00005003200	rpp38	75	49.048	ENSMLUG00000002153	RPP38	94	42.336	Myotis_lucifugus
ENSMZEG00005003200	rpp38	97	45.745	ENSNGAG00000011066	Rpp38	94	44.364	Nannospalax_galili
ENSMZEG00005003200	rpp38	99	97.338	ENSNBRG00000006994	rpp38	100	97.338	Neolamprologus_brichardi
ENSMZEG00005003200	rpp38	96	95.276	ENSONIG00000020467	rpp38	95	94.882	Oreochromis_niloticus
ENSMZEG00005003200	rpp38	94	41.852	ENSOCUG00000024367	-	94	42.379	Oryctolagus_cuniculus
ENSMZEG00005003200	rpp38	94	41.481	ENSOCUG00000022768	-	94	42.007	Oryctolagus_cuniculus
ENSMZEG00005003200	rpp38	96	70.189	ENSORLG00000009219	rpp38	95	68.182	Oryzias_latipes
ENSMZEG00005003200	rpp38	96	69.549	ENSORLG00020011503	rpp38	92	68.679	Oryzias_latipes_hni
ENSMZEG00005003200	rpp38	96	68.797	ENSORLG00015017702	rpp38	92	67.925	Oryzias_latipes_hsok
ENSMZEG00005003200	rpp38	89	68.273	ENSOMEG00000005414	rpp38	95	67.416	Oryzias_melastigma
ENSMZEG00005003200	rpp38	97	40.972	ENSOGAG00000008059	RPP38	72	48.826	Otolemur_garnettii
ENSMZEG00005003200	rpp38	99	41.216	ENSOARG00000004534	RPP38	94	41.071	Ovis_aries
ENSMZEG00005003200	rpp38	99	43.662	ENSPPAG00000041577	RPP38	86	43.728	Pan_paniscus
ENSMZEG00005003200	rpp38	97	42.857	ENSPPRG00000015329	RPP38	94	42.029	Panthera_pardus
ENSMZEG00005003200	rpp38	97	42.500	ENSPTIG00000007188	RPP38	94	41.667	Panthera_tigris_altaica
ENSMZEG00005003200	rpp38	99	43.662	ENSPTRG00000002318	RPP38	86	43.728	Pan_troglodytes
ENSMZEG00005003200	rpp38	93	47.510	ENSPKIG00000025652	rpp38	91	47.909	Paramormyrops_kingsleyae
ENSMZEG00005003200	rpp38	95	40.074	ENSPSIG00000001527	RPP38	90	39.080	Pelodiscus_sinensis
ENSMZEG00005003200	rpp38	99	43.262	ENSPEMG00000008375	Rpp38	94	42.804	Peromyscus_maniculatus_bairdii
ENSMZEG00005003200	rpp38	97	44.364	ENSPCIG00000009096	RPP38	89	44.649	Phascolarctos_cinereus
ENSMZEG00005003200	rpp38	75	63.725	ENSPFOG00000016823	rpp38	95	63.918	Poecilia_formosa
ENSMZEG00005003200	rpp38	99	60.638	ENSPLAG00000007626	rpp38	96	61.029	Poecilia_latipinna
ENSMZEG00005003200	rpp38	96	55.263	ENSPMEG00000020392	rpp38	96	55.639	Poecilia_mexicana
ENSMZEG00005003200	rpp38	93	63.774	ENSPREG00000017744	rpp38	92	63.922	Poecilia_reticulata
ENSMZEG00005003200	rpp38	97	42.294	ENSPPYG00000002113	RPP38	94	42.701	Pongo_abelii
ENSMZEG00005003200	rpp38	94	42.701	ENSPVAG00000007155	RPP38	94	41.993	Pteropus_vampyrus
ENSMZEG00005003200	rpp38	100	99.242	ENSPNYG00000004293	rpp38	100	99.242	Pundamilia_nyererei
ENSMZEG00005003200	rpp38	90	46.250	ENSPNAG00000010633	rpp38	94	45.703	Pygocentrus_nattereri
ENSMZEG00005003200	rpp38	97	45.489	ENSRNOG00000038025	Rpp38	94	45.802	Rattus_norvegicus
ENSMZEG00005003200	rpp38	99	40.925	ENSSHAG00000015529	RPP38	94	42.593	Sarcophilus_harrisii
ENSMZEG00005003200	rpp38	95	73.152	ENSSMAG00000018276	rpp38	91	69.880	Scophthalmus_maximus
ENSMZEG00005003200	rpp38	95	76.265	ENSSDUG00000001651	rpp38	96	75.486	Seriola_dumerili
ENSMZEG00005003200	rpp38	95	76.448	ENSSLDG00000014355	rpp38	96	75.290	Seriola_lalandi_dorsalis
ENSMZEG00005003200	rpp38	99	41.328	ENSSARG00000012099	RPP38	69	44.000	Sorex_araneus
ENSMZEG00005003200	rpp38	92	44.944	ENSSPUG00000005237	-	67	51.269	Sphenodon_punctatus
ENSMZEG00005003200	rpp38	95	41.758	ENSSPUG00000008560	-	66	46.701	Sphenodon_punctatus
ENSMZEG00005003200	rpp38	95	45.421	ENSSPUG00000018363	-	67	50.761	Sphenodon_punctatus
ENSMZEG00005003200	rpp38	96	69.884	ENSSPAG00000020387	rpp38	95	67.704	Stegastes_partitus
ENSMZEG00005003200	rpp38	99	40.550	ENSSSCG00000027110	RPP38	72	44.907	Sus_scrofa
ENSMZEG00005003200	rpp38	90	43.462	ENSTGUG00000001366	RPP38	90	41.985	Taeniopygia_guttata
ENSMZEG00005003200	rpp38	99	66.418	ENSTNIG00000001334	rpp38	97	66.538	Tetraodon_nigroviridis
ENSMZEG00005003200	rpp38	99	42.014	ENSTTRG00000004420	RPP38	94	40.357	Tursiops_truncatus
ENSMZEG00005003200	rpp38	99	42.908	ENSUAMG00000002618	RPP38	94	43.066	Ursus_americanus
ENSMZEG00005003200	rpp38	97	44.404	ENSUMAG00000012382	RPP38	94	43.772	Ursus_maritimus
ENSMZEG00005003200	rpp38	99	43.772	ENSVVUG00000005272	RPP38	74	48.341	Vulpes_vulpes
ENSMZEG00005003200	rpp38	89	40.711	ENSXETG00000003419	rpp38	89	40.711	Xenopus_tropicalis