EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005003221 (Gene tree)
Gene ID: 101465980
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 26441 bases
Position: chrLG4:15518116-15544556
Accession: 101465980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005004241	Ribonuc_2-5A	PF06479.12	1.1e-40	1	1
ENSMZEP00005004222	Ribonuc_2-5A	PF06479.12	1.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005004400	-	5950	XM_004558330	ENSMZEP00005004222	1088 (aa)	XP_004558387	UPI00032A008D
ENSMZET00005004419	-	3255	-	ENSMZEP00005004241	1084 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005003221's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze04140	Autophagy - animal	KEGG
mze04141	Protein processing in endoplasmic reticulum	KEGG
mze04210	Apoptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005003221's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005003221	ern1	97	91.879	ENSAPOG00000009999	ern1	99	90.507	Acanthochromis_polyacanthus
ENSMZEG00005003221	ern1	100	94.761	ENSACIG00000021716	ern1	100	94.761	Amphilophus_citrinellus
ENSMZEG00005003221	ern1	99	91.060	ENSAOCG00000012309	ern1	99	91.060	Amphiprion_ocellaris
ENSMZEG00005003221	ern1	99	90.599	ENSAPEG00000011263	ern1	98	94.595	Amphiprion_percula
ENSMZEG00005003221	ern1	100	89.061	ENSATEG00000024468	ern1	100	89.061	Anabas_testudineus
ENSMZEG00005003221	ern1	100	100.000	ENSACLG00000027919	ern1	100	100.000	Astatotilapia_calliptera
ENSMZEG00005003221	ern1	92	82.786	ENSAMXG00000000944	ern1	96	82.786	Astyanax_mexicanus
ENSMZEG00005003221	ern1	94	88.954	ENSCSEG00000014500	ern1	99	89.247	Cynoglossus_semilaevis
ENSMZEG00005003221	ern1	97	86.433	ENSCVAG00000002988	ern1	99	87.199	Cyprinodon_variegatus
ENSMZEG00005003221	ern1	89	82.627	ENSDARG00000013997	ern1	100	82.627	Danio_rerio
ENSMZEG00005003221	ern1	89	82.635	ENSELUG00000005957	ern1	93	82.635	Esox_lucius
ENSMZEG00005003221	ern1	95	87.488	ENSFHEG00000005578	ern1	97	87.488	Fundulus_heteroclitus
ENSMZEG00005003221	ern1	87	87.979	ENSGMOG00000011232	ern1	100	87.979	Gadus_morhua
ENSMZEG00005003221	ern1	98	86.679	ENSGAFG00000020231	ern1	99	86.679	Gambusia_affinis
ENSMZEG00005003221	ern1	87	91.817	ENSGACG00000011700	ern1	98	91.817	Gasterosteus_aculeatus
ENSMZEG00005003221	ern1	99	98.514	ENSHBUG00000012581	ern1	99	99.250	Haplochromis_burtoni
ENSMZEG00005003221	ern1	99	84.123	ENSHCOG00000016199	ern1	99	84.476	Hippocampus_comes
ENSMZEG00005003221	ern1	89	84.135	ENSIPUG00000011083	ern1	93	84.135	Ictalurus_punctatus
ENSMZEG00005003221	ern1	100	85.780	ENSKMAG00000019499	ern1	100	85.780	Kryptolebias_marmoratus
ENSMZEG00005003221	ern1	98	85.847	ENSLBEG00000025907	ern1	100	85.688	Labrus_bergylta
ENSMZEG00005003221	ern1	100	88.483	ENSMAMG00000023439	ern1	100	88.483	Mastacembelus_armatus
ENSMZEG00005003221	ern1	90	91.385	ENSMMOG00000007650	ern1	97	91.385	Mola_mola
ENSMZEG00005003221	ern1	99	86.667	ENSMALG00000017775	ern1	98	86.667	Monopterus_albus
ENSMZEG00005003221	ern1	99	97.029	ENSNBRG00000002179	ern1	99	97.751	Neolamprologus_brichardi
ENSMZEG00005003221	ern1	87	97.246	ENSONIG00000017169	ern1	98	97.246	Oreochromis_niloticus
ENSMZEG00005003221	ern1	98	86.207	ENSORLG00000008940	ern1	99	86.207	Oryzias_latipes
ENSMZEG00005003221	ern1	99	86.216	ENSORLG00020018387	ern1	99	86.216	Oryzias_latipes_hni
ENSMZEG00005003221	ern1	99	86.124	ENSORLG00015007946	ern1	99	86.124	Oryzias_latipes_hsok
ENSMZEG00005003221	ern1	99	86.124	ENSOMEG00000011741	ern1	99	86.124	Oryzias_melastigma
ENSMZEG00005003221	ern1	89	82.341	ENSPKIG00000005593	ern1	98	82.341	Paramormyrops_kingsleyae
ENSMZEG00005003221	ern1	100	83.868	ENSPMGG00000020442	ern1	98	87.623	Periophthalmus_magnuspinnatus
ENSMZEG00005003221	ern1	96	88.506	ENSPFOG00000007378	ern1	97	88.506	Poecilia_formosa
ENSMZEG00005003221	ern1	96	88.506	ENSPLAG00000014780	ern1	97	88.506	Poecilia_latipinna
ENSMZEG00005003221	ern1	96	88.602	ENSPMEG00000016324	ern1	97	88.602	Poecilia_mexicana
ENSMZEG00005003221	ern1	96	88.027	ENSPREG00000006286	ern1	97	88.027	Poecilia_reticulata
ENSMZEG00005003221	ern1	100	99.449	ENSPNYG00000017929	ern1	100	99.449	Pundamilia_nyererei
ENSMZEG00005003221	ern1	97	79.755	ENSPNAG00000029447	ern1	99	79.944	Pygocentrus_nattereri
ENSMZEG00005003221	ern1	100	87.511	ENSSMAG00000015042	ern1	100	87.511	Scophthalmus_maximus
ENSMZEG00005003221	ern1	100	90.876	ENSSDUG00000009098	ern1	100	90.876	Seriola_dumerili
ENSMZEG00005003221	ern1	100	90.420	ENSSLDG00000023254	ern1	100	90.420	Seriola_lalandi_dorsalis
ENSMZEG00005003221	ern1	99	90.156	ENSSPAG00000017539	ern1	99	90.198	Stegastes_partitus
ENSMZEG00005003221	ern1	94	87.980	ENSTRUG00000001041	ern1	97	87.980	Takifugu_rubripes
ENSMZEG00005003221	ern1	86	92.283	ENSTNIG00000017990	ern1	99	91.186	Tetraodon_nigroviridis
ENSMZEG00005003221	ern1	91	91.066	ENSXCOG00000010330	ern1	97	91.066	Xiphophorus_couchianus
ENSMZEG00005003221	ern1	99	85.727	ENSXMAG00000001310	ern1	96	88.547	Xiphophorus_maculatus