EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005003241 (Gene tree)
Gene ID: 101475578
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 12522 bases
Position: chrLG13:17569677-17582198
Accession: 101475578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005004312	NUC173	PF08161.12	2e-73	1	1
ENSMZEP00005004293	NUC173	PF08161.12	2.2e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005004498	-	3870	-	ENSMZEP00005004312	1289 (aa)	-	-
ENSMZET00005004474	-	5537	XM_004555860	ENSMZEP00005004293	1288 (aa)	XP_004555917	UPI000D2F9823

Gene Model

Click here to download ENSMZEG00005003241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005003241's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005003241	rrp12	99	63.308	ENSG00000052749	RRP12	100	75.000	Homo_sapiens
ENSMZEG00005003241	rrp12	99	87.082	ENSAPOG00000013355	rrp12	99	87.082	Acanthochromis_polyacanthus
ENSMZEG00005003241	rrp12	99	62.903	ENSAMEG00000000134	RRP12	99	63.109	Ailuropoda_melanoleuca
ENSMZEG00005003241	rrp12	99	94.601	ENSACIG00000022673	rrp12	99	94.601	Amphilophus_citrinellus
ENSMZEG00005003241	rrp12	99	90.000	ENSAOCG00000016149	rrp12	99	90.000	Amphiprion_ocellaris
ENSMZEG00005003241	rrp12	99	88.318	ENSAPEG00000016023	rrp12	99	88.318	Amphiprion_percula
ENSMZEG00005003241	rrp12	99	88.066	ENSATEG00000022627	rrp12	99	87.988	Anabas_testudineus
ENSMZEG00005003241	rrp12	97	60.734	ENSAPLG00000014387	RRP12	99	61.013	Anas_platyrhynchos
ENSMZEG00005003241	rrp12	99	60.031	ENSACAG00000002175	RRP12	99	59.891	Anolis_carolinensis
ENSMZEG00005003241	rrp12	92	76.974	ENSANAG00000037485	RRP12	99	76.974	Aotus_nancymaae
ENSMZEG00005003241	rrp12	100	99.767	ENSACLG00000007354	rrp12	100	99.767	Astatotilapia_calliptera
ENSMZEG00005003241	rrp12	99	75.758	ENSAMXG00000012852	rrp12	99	75.606	Astyanax_mexicanus
ENSMZEG00005003241	rrp12	99	63.000	ENSBTAG00000002191	RRP12	99	74.026	Bos_taurus
ENSMZEG00005003241	rrp12	85	61.126	ENSCJAG00000016549	-	99	61.461	Callithrix_jacchus
ENSMZEG00005003241	rrp12	99	62.826	ENSCAFG00000009043	RRP12	99	63.109	Canis_familiaris
ENSMZEG00005003241	rrp12	99	62.826	ENSCAFG00020005991	RRP12	99	63.109	Canis_lupus_dingo
ENSMZEG00005003241	rrp12	99	60.870	ENSCHIG00000011876	RRP12	99	60.829	Capra_hircus
ENSMZEG00005003241	rrp12	53	55.747	ENSTSYG00000030210	-	98	56.168	Carlito_syrichta
ENSMZEG00005003241	rrp12	97	57.394	ENSCAPG00000008991	RRP12	97	57.615	Cavia_aperea
ENSMZEG00005003241	rrp12	100	62.809	ENSCPOG00000004215	RRP12	99	63.064	Cavia_porcellus
ENSMZEG00005003241	rrp12	70	57.912	ENSCCAG00000033123	-	82	58.057	Cebus_capucinus
ENSMZEG00005003241	rrp12	80	66.370	ENSCCAG00000024088	RRP12	98	69.466	Cebus_capucinus
ENSMZEG00005003241	rrp12	99	59.122	ENSCATG00000045310	RRP12	99	59.457	Cercocebus_atys
ENSMZEG00005003241	rrp12	100	62.202	ENSCLAG00000003753	RRP12	99	62.393	Chinchilla_lanigera
ENSMZEG00005003241	rrp12	88	61.498	ENSCSAG00000005877	RRP12	99	61.896	Chlorocebus_sabaeus
ENSMZEG00005003241	rrp12	59	70.549	ENSCHOG00000003095	-	60	71.048	Choloepus_hoffmanni
ENSMZEG00005003241	rrp12	94	65.157	ENSCPBG00000011935	RRP12	96	65.054	Chrysemys_picta_bellii
ENSMZEG00005003241	rrp12	64	40.898	ENSCSAVG00000006059	-	99	40.980	Ciona_savignyi
ENSMZEG00005003241	rrp12	92	75.658	ENSCANG00000031653	RRP12	99	75.658	Colobus_angolensis_palliatus
ENSMZEG00005003241	rrp12	90	63.396	ENSCGRG00001004338	Rrp12	99	63.636	Cricetulus_griseus_chok1gshd
ENSMZEG00005003241	rrp12	99	63.089	ENSCGRG00000011965	Rrp12	99	63.150	Cricetulus_griseus_crigri
ENSMZEG00005003241	rrp12	99	84.341	ENSCSEG00000007799	rrp12	99	84.399	Cynoglossus_semilaevis
ENSMZEG00005003241	rrp12	99	86.562	ENSCVAG00000003418	rrp12	99	86.719	Cyprinodon_variegatus
ENSMZEG00005003241	rrp12	99	73.701	ENSDARG00000022410	rrp12	99	73.984	Danio_rerio
ENSMZEG00005003241	rrp12	99	62.914	ENSDNOG00000005120	RRP12	99	63.109	Dasypus_novemcinctus
ENSMZEG00005003241	rrp12	99	62.769	ENSDORG00000009199	Rrp12	99	63.129	Dipodomys_ordii
ENSMZEG00005003241	rrp12	93	56.818	ENSETEG00000002455	RRP12	92	64.384	Echinops_telfairi
ENSMZEG00005003241	rrp12	85	55.000	ENSEBUG00000006555	rrp12	96	74.359	Eptatretus_burgeri
ENSMZEG00005003241	rrp12	99	63.279	ENSEASG00005008693	RRP12	99	63.488	Equus_asinus_asinus
ENSMZEG00005003241	rrp12	94	63.063	ENSECAG00000010892	RRP12	99	63.372	Equus_caballus
ENSMZEG00005003241	rrp12	64	57.647	ENSEEUG00000005447	-	64	57.353	Erinaceus_europaeus
ENSMZEG00005003241	rrp12	99	78.433	ENSELUG00000010510	rrp12	99	77.986	Esox_lucius
ENSMZEG00005003241	rrp12	97	75.658	ENSFCAG00000028639	RRP12	99	75.658	Felis_catus
ENSMZEG00005003241	rrp12	94	63.210	ENSFALG00000008458	RRP12	98	63.826	Ficedula_albicollis
ENSMZEG00005003241	rrp12	99	62.654	ENSFDAG00000019108	RRP12	95	62.937	Fukomys_damarensis
ENSMZEG00005003241	rrp12	99	78.159	ENSFHEG00000004148	rrp12	99	77.691	Fundulus_heteroclitus
ENSMZEG00005003241	rrp12	96	81.481	ENSGMOG00000004188	rrp12	95	81.481	Gadus_morhua
ENSMZEG00005003241	rrp12	99	63.904	ENSGALG00000041331	RRP12	96	64.439	Gallus_gallus
ENSMZEG00005003241	rrp12	99	86.105	ENSGAFG00000009038	rrp12	99	86.105	Gambusia_affinis
ENSMZEG00005003241	rrp12	99	84.272	ENSGACG00000007175	rrp12	99	84.272	Gasterosteus_aculeatus
ENSMZEG00005003241	rrp12	67	67.128	ENSGAGG00000019169	RRP12	96	66.901	Gopherus_agassizii
ENSMZEG00005003241	rrp12	99	63.385	ENSGGOG00000014850	RRP12	99	75.000	Gorilla_gorilla
ENSMZEG00005003241	rrp12	100	99.301	ENSHBUG00000023527	rrp12	100	99.301	Haplochromis_burtoni
ENSMZEG00005003241	rrp12	99	62.886	ENSHGLG00000016772	RRP12	99	62.626	Heterocephalus_glaber_female
ENSMZEG00005003241	rrp12	99	62.886	ENSHGLG00100015110	RRP12	99	62.626	Heterocephalus_glaber_male
ENSMZEG00005003241	rrp12	100	82.171	ENSHCOG00000019519	rrp12	99	82.081	Hippocampus_comes
ENSMZEG00005003241	rrp12	94	86.441	ENSIPUG00000000311	RRP12	98	94.872	Ictalurus_punctatus
ENSMZEG00005003241	rrp12	99	63.300	ENSSTOG00000006515	RRP12	99	63.947	Ictidomys_tridecemlineatus
ENSMZEG00005003241	rrp12	96	62.380	ENSJJAG00000000110	Rrp12	98	62.701	Jaculus_jaculus
ENSMZEG00005003241	rrp12	99	86.406	ENSKMAG00000020621	rrp12	99	86.406	Kryptolebias_marmoratus
ENSMZEG00005003241	rrp12	99	82.984	ENSLBEG00000015335	rrp12	99	82.670	Labrus_bergylta
ENSMZEG00005003241	rrp12	72	64.419	ENSLACG00000016633	RRP12	82	64.419	Latimeria_chalumnae
ENSMZEG00005003241	rrp12	100	70.413	ENSLOCG00000003846	rrp12	99	69.807	Lepisosteus_oculatus
ENSMZEG00005003241	rrp12	99	63.748	ENSLAFG00000015965	RRP12	99	63.573	Loxodonta_africana
ENSMZEG00005003241	rrp12	92	75.000	ENSMFAG00000041558	RRP12	99	75.000	Macaca_fascicularis
ENSMZEG00005003241	rrp12	92	75.000	ENSMMUG00000019634	RRP12	99	75.000	Macaca_mulatta
ENSMZEG00005003241	rrp12	92	75.000	ENSMNEG00000036759	RRP12	99	75.000	Macaca_nemestrina
ENSMZEG00005003241	rrp12	92	75.658	ENSMLEG00000041317	RRP12	99	75.658	Mandrillus_leucophaeus
ENSMZEG00005003241	rrp12	99	85.781	ENSMAMG00000002964	rrp12	99	88.777	Mastacembelus_armatus
ENSMZEG00005003241	rrp12	99	62.173	ENSMGAG00000009829	RRP12	99	62.587	Meleagris_gallopavo
ENSMZEG00005003241	rrp12	99	60.431	ENSMAUG00000020743	Rrp12	99	60.480	Mesocricetus_auratus
ENSMZEG00005003241	rrp12	92	75.163	ENSMICG00000007624	RRP12	99	75.817	Microcebus_murinus
ENSMZEG00005003241	rrp12	100	63.000	ENSMOCG00000006753	Rrp12	99	63.101	Microtus_ochrogaster
ENSMZEG00005003241	rrp12	100	85.426	ENSMMOG00000010708	rrp12	99	85.625	Mola_mola
ENSMZEG00005003241	rrp12	99	63.601	ENSMODG00000004315	RRP12	99	63.686	Monodelphis_domestica
ENSMZEG00005003241	rrp12	99	80.982	ENSMALG00000016560	rrp12	99	86.599	Monopterus_albus
ENSMZEG00005003241	rrp12	99	63.234	MGP_CAROLIEiJ_G0022957	Rrp12	99	62.980	Mus_caroli
ENSMZEG00005003241	rrp12	99	63.818	ENSMUSG00000035049	Rrp12	99	63.488	Mus_musculus
ENSMZEG00005003241	rrp12	100	63.769	MGP_PahariEiJ_G0014447	Rrp12	99	63.798	Mus_pahari
ENSMZEG00005003241	rrp12	99	63.972	MGP_SPRETEiJ_G0023878	Rrp12	99	63.721	Mus_spretus
ENSMZEG00005003241	rrp12	99	62.385	ENSMPUG00000017046	RRP12	99	62.722	Mustela_putorius_furo
ENSMZEG00005003241	rrp12	99	62.932	ENSMLUG00000017160	RRP12	99	63.138	Myotis_lucifugus
ENSMZEG00005003241	rrp12	99	63.405	ENSNGAG00000024144	Rrp12	99	63.460	Nannospalax_galili
ENSMZEG00005003241	rrp12	100	96.661	ENSNBRG00000009987	rrp12	100	96.661	Neolamprologus_brichardi
ENSMZEG00005003241	rrp12	92	76.316	ENSNLEG00000013762	RRP12	99	76.316	Nomascus_leucogenys
ENSMZEG00005003241	rrp12	100	58.269	ENSMEUG00000003185	RRP12	99	58.645	Notamacropus_eugenii
ENSMZEG00005003241	rrp12	94	66.889	ENSOPRG00000005001	RRP12	93	66.889	Ochotona_princeps
ENSMZEG00005003241	rrp12	100	62.771	ENSODEG00000016439	RRP12	99	62.908	Octodon_degus
ENSMZEG00005003241	rrp12	100	97.904	ENSONIG00000009528	rrp12	100	97.904	Oreochromis_niloticus
ENSMZEG00005003241	rrp12	100	59.171	ENSOANG00000006560	RRP12	99	59.165	Ornithorhynchus_anatinus
ENSMZEG00005003241	rrp12	99	63.117	ENSOCUG00000005662	RRP12	99	63.714	Oryctolagus_cuniculus
ENSMZEG00005003241	rrp12	99	86.016	ENSORLG00000008688	rrp12	99	85.692	Oryzias_latipes
ENSMZEG00005003241	rrp12	97	86.317	ENSORLG00020002355	rrp12	99	86.317	Oryzias_latipes_hni
ENSMZEG00005003241	rrp12	99	86.406	ENSORLG00015006709	rrp12	99	86.406	Oryzias_latipes_hsok
ENSMZEG00005003241	rrp12	97	86.078	ENSOMEG00000002609	rrp12	99	86.078	Oryzias_melastigma
ENSMZEG00005003241	rrp12	99	62.519	ENSOGAG00000001626	RRP12	99	62.568	Otolemur_garnettii
ENSMZEG00005003241	rrp12	99	62.366	ENSOARG00000009681	RRP12	99	62.490	Ovis_aries
ENSMZEG00005003241	rrp12	99	61.538	ENSPPAG00000043885	RRP12	99	75.000	Pan_paniscus
ENSMZEG00005003241	rrp12	97	75.658	ENSPPRG00000002029	RRP12	99	75.658	Panthera_pardus
ENSMZEG00005003241	rrp12	97	75.658	ENSPTIG00000004428	RRP12	99	75.658	Panthera_tigris_altaica
ENSMZEG00005003241	rrp12	99	61.615	ENSPTRG00000002806	RRP12	99	75.000	Pan_troglodytes
ENSMZEG00005003241	rrp12	92	75.658	ENSPANG00000021360	RRP12	99	75.658	Papio_anubis
ENSMZEG00005003241	rrp12	100	74.114	ENSPKIG00000016516	rrp12	99	74.184	Paramormyrops_kingsleyae
ENSMZEG00005003241	rrp12	99	82.578	ENSPMGG00000020217	rrp12	99	82.656	Periophthalmus_magnuspinnatus
ENSMZEG00005003241	rrp12	100	64.028	ENSPEMG00000008437	Rrp12	99	64.346	Peromyscus_maniculatus_bairdii
ENSMZEG00005003241	rrp12	89	52.334	ENSPMAG00000007493	rrp12	88	52.070	Petromyzon_marinus
ENSMZEG00005003241	rrp12	96	72.819	ENSPCIG00000002157	RRP12	99	63.757	Phascolarctos_cinereus
ENSMZEG00005003241	rrp12	99	85.870	ENSPFOG00000014975	rrp12	99	85.870	Poecilia_formosa
ENSMZEG00005003241	rrp12	99	85.714	ENSPLAG00000009840	rrp12	99	85.714	Poecilia_latipinna
ENSMZEG00005003241	rrp12	99	85.870	ENSPMEG00000021871	rrp12	99	85.870	Poecilia_mexicana
ENSMZEG00005003241	rrp12	99	82.380	ENSPREG00000020950	rrp12	99	81.944	Poecilia_reticulata
ENSMZEG00005003241	rrp12	99	62.308	ENSPPYG00000002528	RRP12	99	62.587	Pongo_abelii
ENSMZEG00005003241	rrp12	94	77.401	ENSPCAG00000008967	RRP12	94	77.401	Procavia_capensis
ENSMZEG00005003241	rrp12	92	76.316	ENSPCOG00000014009	RRP12	99	76.316	Propithecus_coquereli
ENSMZEG00005003241	rrp12	99	60.462	ENSPVAG00000003370	RRP12	99	60.388	Pteropus_vampyrus
ENSMZEG00005003241	rrp12	100	99.379	ENSPNYG00000009451	rrp12	100	99.379	Pundamilia_nyererei
ENSMZEG00005003241	rrp12	93	87.755	ENSPNAG00000007658	rrp12	99	75.587	Pygocentrus_nattereri
ENSMZEG00005003241	rrp12	99	63.251	ENSRNOG00000048495	Rrp12	99	63.150	Rattus_norvegicus
ENSMZEG00005003241	rrp12	92	75.658	ENSRBIG00000021296	RRP12	99	75.658	Rhinopithecus_bieti
ENSMZEG00005003241	rrp12	92	75.658	ENSRROG00000032482	RRP12	99	75.658	Rhinopithecus_roxellana
ENSMZEG00005003241	rrp12	92	75.658	ENSSBOG00000030992	RRP12	99	75.658	Saimiri_boliviensis_boliviensis
ENSMZEG00005003241	rrp12	99	63.538	ENSSHAG00000018275	RRP12	99	63.729	Sarcophilus_harrisii
ENSMZEG00005003241	rrp12	99	76.028	ENSSFOG00015016400	rrp12	99	76.112	Scleropages_formosus
ENSMZEG00005003241	rrp12	99	87.969	ENSSMAG00000004047	rrp12	99	87.969	Scophthalmus_maximus
ENSMZEG00005003241	rrp12	99	90.078	ENSSDUG00000022871	rrp12	99	90.078	Seriola_dumerili
ENSMZEG00005003241	rrp12	99	90.000	ENSSLDG00000003038	rrp12	99	90.000	Seriola_lalandi_dorsalis
ENSMZEG00005003241	rrp12	100	61.740	ENSSPUG00000012221	RRP12	99	61.938	Sphenodon_punctatus
ENSMZEG00005003241	rrp12	99	90.078	ENSSPAG00000002261	rrp12	99	90.078	Stegastes_partitus
ENSMZEG00005003241	rrp12	100	62.231	ENSSSCG00000010514	RRP12	99	62.248	Sus_scrofa
ENSMZEG00005003241	rrp12	89	60.384	ENSTGUG00000009711	RRP12	99	60.334	Taeniopygia_guttata
ENSMZEG00005003241	rrp12	100	79.270	ENSTRUG00000012017	rrp12	99	78.795	Takifugu_rubripes
ENSMZEG00005003241	rrp12	100	84.550	ENSTNIG00000016522	rrp12	99	84.898	Tetraodon_nigroviridis
ENSMZEG00005003241	rrp12	78	75.000	ENSTBEG00000004907	RRP12	80	75.000	Tupaia_belangeri
ENSMZEG00005003241	rrp12	100	61.171	ENSTTRG00000009878	RRP12	99	61.025	Tursiops_truncatus
ENSMZEG00005003241	rrp12	99	62.855	ENSUAMG00000009092	RRP12	99	63.060	Ursus_americanus
ENSMZEG00005003241	rrp12	99	61.167	ENSUMAG00000021621	RRP12	99	61.664	Ursus_maritimus
ENSMZEG00005003241	rrp12	99	63.101	ENSVVUG00000023168	RRP12	99	63.178	Vulpes_vulpes
ENSMZEG00005003241	rrp12	99	66.873	ENSXETG00000003430	rrp12	99	66.899	Xenopus_tropicalis
ENSMZEG00005003241	rrp12	90	84.364	ENSXCOG00000012082	rrp12	97	84.351	Xiphophorus_couchianus
ENSMZEG00005003241	rrp12	99	85.480	ENSXMAG00000013498	rrp12	99	85.714	Xiphophorus_maculatus