EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005003336 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 28270 bases
Position: chrAGTA05000164.1:164702-192971
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005005069	zf-C2H2	PF00096.26	1.4e-52	1	8
ENSMZEP00005005069	zf-C2H2	PF00096.26	1.4e-52	2	8
ENSMZEP00005005069	zf-C2H2	PF00096.26	1.4e-52	3	8
ENSMZEP00005005069	zf-C2H2	PF00096.26	1.4e-52	4	8
ENSMZEP00005005069	zf-C2H2	PF00096.26	1.4e-52	5	8
ENSMZEP00005005069	zf-C2H2	PF00096.26	1.4e-52	6	8
ENSMZEP00005005069	zf-C2H2	PF00096.26	1.4e-52	7	8
ENSMZEP00005005069	zf-C2H2	PF00096.26	1.4e-52	8	8
ENSMZEP00005004465	zf-C2H2	PF00096.26	5.3e-46	1	7
ENSMZEP00005004465	zf-C2H2	PF00096.26	5.3e-46	2	7
ENSMZEP00005004465	zf-C2H2	PF00096.26	5.3e-46	3	7
ENSMZEP00005004465	zf-C2H2	PF00096.26	5.3e-46	4	7
ENSMZEP00005004465	zf-C2H2	PF00096.26	5.3e-46	5	7
ENSMZEP00005004465	zf-C2H2	PF00096.26	5.3e-46	6	7
ENSMZEP00005004465	zf-C2H2	PF00096.26	5.3e-46	7	7
ENSMZEP00005005069	zf-met	PF12874.7	2.3e-14	1	2
ENSMZEP00005005069	zf-met	PF12874.7	2.3e-14	2	2
ENSMZEP00005004465	zf-met	PF12874.7	6.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005005293	-	1296	-	ENSMZEP00005005069	431 (aa)	-	-
ENSMZET00005004667	-	1146	-	ENSMZEP00005004465	381 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005003336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005003336's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005003336	-	93	38.158	ENSAPOG00000019960	-	99	40.196	Acanthochromis_polyacanthus
ENSMZEG00005003336	-	98	56.746	ENSAPOG00000006303	-	92	60.079	Acanthochromis_polyacanthus
ENSMZEG00005003336	-	94	48.276	ENSAPOG00000008802	-	100	58.000	Acanthochromis_polyacanthus
ENSMZEG00005003336	-	95	56.977	ENSACIG00000004745	-	91	56.977	Amphilophus_citrinellus
ENSMZEG00005003336	-	84	55.921	ENSACIG00000022658	-	93	54.487	Amphilophus_citrinellus
ENSMZEG00005003336	-	85	51.456	ENSAOCG00000013710	-	98	56.275	Amphiprion_ocellaris
ENSMZEG00005003336	-	94	53.982	ENSAOCG00000014165	-	96	48.023	Amphiprion_ocellaris
ENSMZEG00005003336	-	98	57.371	ENSAOCG00000013130	-	97	57.371	Amphiprion_ocellaris
ENSMZEG00005003336	-	97	57.143	ENSAPEG00000009383	-	96	57.143	Amphiprion_percula
ENSMZEG00005003336	-	97	55.556	ENSAPEG00000006650	-	96	55.556	Amphiprion_percula
ENSMZEG00005003336	-	82	47.605	ENSATEG00000017618	-	99	50.593	Anabas_testudineus
ENSMZEG00005003336	-	82	47.605	ENSATEG00000015695	-	99	50.593	Anabas_testudineus
ENSMZEG00005003336	-	96	58.590	ENSACLG00000023513	-	94	57.674	Astatotilapia_calliptera
ENSMZEG00005003336	-	99	57.430	ENSACLG00000021343	-	98	57.430	Astatotilapia_calliptera
ENSMZEG00005003336	-	98	53.755	ENSACLG00000026703	-	90	53.755	Astatotilapia_calliptera
ENSMZEG00005003336	-	79	39.820	ENSACLG00000019291	-	88	44.400	Astatotilapia_calliptera
ENSMZEG00005003336	-	100	100.000	ENSACLG00000018746	-	100	100.000	Astatotilapia_calliptera
ENSMZEG00005003336	-	81	48.961	ENSAMXG00000042275	-	92	50.439	Astyanax_mexicanus
ENSMZEG00005003336	-	78	47.807	ENSAMXG00000043302	-	73	50.000	Astyanax_mexicanus
ENSMZEG00005003336	-	84	46.739	ENSAMXG00000039408	-	91	46.739	Astyanax_mexicanus
ENSMZEG00005003336	-	79	53.947	ENSAMXG00000035920	-	89	53.947	Astyanax_mexicanus
ENSMZEG00005003336	-	77	53.939	ENSAMXG00000041975	-	81	51.626	Astyanax_mexicanus
ENSMZEG00005003336	-	88	48.521	ENSBTAG00000016191	ZNF32	89	47.205	Bos_taurus
ENSMZEG00005003336	-	88	48.521	ENSCHIG00000021099	ZNF32	89	47.205	Capra_hircus
ENSMZEG00005003336	-	86	45.926	ENSCSAVG00000001808	-	100	49.180	Ciona_savignyi
ENSMZEG00005003336	-	99	45.522	ENSCVAG00000021225	-	92	70.213	Cyprinodon_variegatus
ENSMZEG00005003336	-	83	46.931	ENSDARG00000099986	si:ch211-207i20.2	60	48.214	Danio_rerio
ENSMZEG00005003336	-	86	49.112	ENSDNOG00000035046	ZNF32	88	47.205	Dasypus_novemcinctus
ENSMZEG00005003336	-	77	49.112	ENSEASG00005006910	ZNF32	71	53.886	Equus_asinus_asinus
ENSMZEG00005003336	-	77	49.112	ENSECAG00000023676	ZNF32	71	53.886	Equus_caballus
ENSMZEG00005003336	-	78	47.857	ENSELUG00000021229	-	90	47.857	Esox_lucius
ENSMZEG00005003336	-	77	49.618	ENSFHEG00000018063	-	96	46.334	Fundulus_heteroclitus
ENSMZEG00005003336	-	90	48.020	ENSFHEG00000000678	-	94	47.783	Fundulus_heteroclitus
ENSMZEG00005003336	-	91	48.951	ENSGAFG00000020499	-	98	50.000	Gambusia_affinis
ENSMZEG00005003336	-	77	45.066	ENSGACG00000010352	si:ch211-207i20.2	68	45.066	Gasterosteus_aculeatus
ENSMZEG00005003336	-	78	54.190	ENSHBUG00000021003	-	95	56.828	Haplochromis_burtoni
ENSMZEG00005003336	-	84	83.908	ENSHBUG00000015166	-	97	54.545	Haplochromis_burtoni
ENSMZEG00005003336	-	80	40.520	ENSHBUG00000013296	-	96	39.544	Haplochromis_burtoni
ENSMZEG00005003336	-	84	42.800	ENSIPUG00000005733	-	92	44.803	Ictalurus_punctatus
ENSMZEG00005003336	-	77	47.951	ENSIPUG00000021998	-	91	50.000	Ictalurus_punctatus
ENSMZEG00005003336	-	94	46.602	ENSIPUG00000022741	-	79	50.980	Ictalurus_punctatus
ENSMZEG00005003336	-	78	49.640	ENSIPUG00000023761	-	62	49.640	Ictalurus_punctatus
ENSMZEG00005003336	-	78	48.077	ENSIPUG00000002655	-	98	55.435	Ictalurus_punctatus
ENSMZEG00005003336	-	78	48.182	ENSLBEG00000020128	-	95	50.251	Labrus_bergylta
ENSMZEG00005003336	-	94	67.308	ENSMAMG00000014734	-	74	67.308	Mastacembelus_armatus
ENSMZEG00005003336	-	93	50.575	ENSMZEG00005025343	-	98	50.575	Maylandia_zebra
ENSMZEG00005003336	-	94	47.838	ENSMZEG00005007262	-	98	51.064	Maylandia_zebra
ENSMZEG00005003336	-	93	56.051	ENSMZEG00005019918	-	95	60.870	Maylandia_zebra
ENSMZEG00005003336	-	83	52.258	ENSMZEG00005026082	-	82	49.000	Maylandia_zebra
ENSMZEG00005003336	-	90	35.040	ENSMZEG00005020156	-	85	39.764	Maylandia_zebra
ENSMZEG00005003336	-	81	41.429	ENSMZEG00005020162	-	73	44.643	Maylandia_zebra
ENSMZEG00005003336	-	83	38.315	ENSMZEG00005014592	-	90	43.254	Maylandia_zebra
ENSMZEG00005003336	-	88	50.909	ENSMZEG00005021052	-	90	50.754	Maylandia_zebra
ENSMZEG00005003336	-	79	43.258	ENSMZEG00005012715	-	80	42.553	Maylandia_zebra
ENSMZEG00005003336	-	94	53.333	ENSMMOG00000004460	-	92	52.590	Mola_mola
ENSMZEG00005003336	-	78	48.249	ENSMMOG00000006131	-	90	49.569	Mola_mola
ENSMZEG00005003336	-	94	55.446	ENSMMOG00000010703	-	98	55.446	Mola_mola
ENSMZEG00005003336	-	92	51.629	ENSMALG00000007051	-	97	55.422	Monopterus_albus
ENSMZEG00005003336	-	95	52.414	ENSMALG00000004216	-	91	52.414	Monopterus_albus
ENSMZEG00005003336	-	96	47.809	ENSMALG00000015655	-	99	53.039	Monopterus_albus
ENSMZEG00005003336	-	66	53.886	ENSMUSG00000059689	Zfp637	79	47.826	Mus_musculus
ENSMZEG00005003336	-	86	49.112	MGP_PahariEiJ_G0022533	Zfp637	89	47.826	Mus_pahari
ENSMZEG00005003336	-	85	49.112	MGP_SPRETEiJ_G0029809	Zfp637	79	47.826	Mus_spretus
ENSMZEG00005003336	-	82	53.886	ENSNGAG00000020281	Zfp637	84	53.886	Nannospalax_galili
ENSMZEG00005003336	-	80	42.975	ENSNBRG00000005796	-	93	42.975	Neolamprologus_brichardi
ENSMZEG00005003336	-	82	46.053	ENSNBRG00000003000	-	82	46.053	Neolamprologus_brichardi
ENSMZEG00005003336	-	88	40.810	ENSNBRG00000005805	-	93	44.828	Neolamprologus_brichardi
ENSMZEG00005003336	-	96	54.618	ENSNBRG00000000523	-	99	54.618	Neolamprologus_brichardi
ENSMZEG00005003336	-	83	36.688	ENSNBRG00000016564	-	87	39.130	Neolamprologus_brichardi
ENSMZEG00005003336	-	86	40.796	ENSNBRG00000005849	-	89	43.407	Neolamprologus_brichardi
ENSMZEG00005003336	-	81	39.130	ENSONIG00000015552	-	93	39.130	Oreochromis_niloticus
ENSMZEG00005003336	-	88	41.438	ENSONIG00000015514	-	95	41.438	Oreochromis_niloticus
ENSMZEG00005003336	-	81	42.512	ENSONIG00000005693	-	96	42.512	Oreochromis_niloticus
ENSMZEG00005003336	-	77	48.521	ENSOARG00000002999	ZNF32	71	53.368	Ovis_aries
ENSMZEG00005003336	-	80	45.486	ENSPLAG00000015973	-	99	48.529	Poecilia_latipinna
ENSMZEG00005003336	-	94	51.754	ENSPMEG00000016458	-	99	46.367	Poecilia_mexicana
ENSMZEG00005003336	-	94	45.098	ENSPMEG00000006726	-	98	45.771	Poecilia_mexicana
ENSMZEG00005003336	-	78	45.525	ENSPREG00000010437	-	81	44.880	Poecilia_reticulata
ENSMZEG00005003336	-	85	44.838	ENSPCAG00000005270	-	97	48.221	Procavia_capensis
ENSMZEG00005003336	-	81	47.368	ENSPVAG00000009430	-	79	47.368	Pteropus_vampyrus
ENSMZEG00005003336	-	92	55.603	ENSPNYG00000007597	-	96	50.201	Pundamilia_nyererei
ENSMZEG00005003336	-	93	56.078	ENSPNYG00000002684	-	99	57.303	Pundamilia_nyererei
ENSMZEG00005003336	-	84	49.780	ENSPNAG00000029997	-	86	51.786	Pygocentrus_nattereri
ENSMZEG00005003336	-	79	47.458	ENSSFOG00015015878	-	93	45.783	Scleropages_formosus
ENSMZEG00005003336	-	96	49.510	ENSSDUG00000015182	-	87	52.589	Seriola_dumerili
ENSMZEG00005003336	-	89	50.909	ENSSDUG00000015159	-	95	51.479	Seriola_dumerili
ENSMZEG00005003336	-	98	53.350	ENSSDUG00000008943	-	100	55.882	Seriola_dumerili
ENSMZEG00005003336	-	94	53.782	ENSSDUG00000015254	-	98	53.782	Seriola_dumerili
ENSMZEG00005003336	-	96	45.946	ENSSLDG00000018273	-	92	51.724	Seriola_lalandi_dorsalis
ENSMZEG00005003336	-	96	54.911	ENSSLDG00000020675	-	99	54.911	Seriola_lalandi_dorsalis
ENSMZEG00005003336	-	81	47.977	ENSSLDG00000012036	-	99	51.592	Seriola_lalandi_dorsalis
ENSMZEG00005003336	-	82	45.411	ENSSARG00000000532	-	85	49.004	Sorex_araneus
ENSMZEG00005003336	-	91	52.336	ENSXCOG00000008116	-	98	52.336	Xiphophorus_couchianus