EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005003469 (Gene tree)
Gene ID: 112430036
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap-binding protein subunit 1-like
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 10767 bases
Position: chrLG2:8530656-8541422
Accession: 112430036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005004505	MIF4G_like	PF09088.11	7.5e-37	1	1
ENSMZEP00005004505	MIF4G_like_2	PF09090.11	2.3e-84	1	1
ENSMZEP00005004505	MIF4G	PF02854.19	5.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005004707	NCBP1-201	3756	XM_024804105	ENSMZEP00005004505	795 (aa)	XP_024659873	UPI000329867B

Gene Model

Click here to download ENSMZEG00005003469's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03013	RNA transport	KEGG
mze03015	mRNA surveillance pathway	KEGG
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005003469's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005003469	NCBP1	99	82.746	ENSG00000136937	NCBP1	99	83.123	Homo_sapiens
ENSMZEG00005003469	NCBP1	100	96.981	ENSAPOG00000008002	NCBP1	100	96.981	Acanthochromis_polyacanthus
ENSMZEG00005003469	NCBP1	99	82.663	ENSAMEG00000004763	NCBP1	99	83.040	Ailuropoda_melanoleuca
ENSMZEG00005003469	NCBP1	100	98.365	ENSACIG00000000274	NCBP1	100	98.365	Amphilophus_citrinellus
ENSMZEG00005003469	NCBP1	100	96.604	ENSAOCG00000021148	NCBP1	100	96.604	Amphiprion_ocellaris
ENSMZEG00005003469	NCBP1	100	96.604	ENSAPEG00000001701	NCBP1	100	96.604	Amphiprion_percula
ENSMZEG00005003469	NCBP1	100	96.730	ENSATEG00000006929	NCBP1	100	96.730	Anabas_testudineus
ENSMZEG00005003469	NCBP1	95	83.553	ENSAPLG00000016318	NCBP1	99	83.684	Anas_platyrhynchos
ENSMZEG00005003469	NCBP1	99	83.396	ENSACAG00000004409	NCBP1	87	83.521	Anolis_carolinensis
ENSMZEG00005003469	NCBP1	99	80.730	ENSANAG00000025744	NCBP1	99	82.483	Aotus_nancymaae
ENSMZEG00005003469	NCBP1	100	100.000	ENSACLG00000014812	NCBP1	100	100.000	Astatotilapia_calliptera
ENSMZEG00005003469	NCBP1	100	90.590	ENSAMXG00000016364	NCBP1	100	90.590	Astyanax_mexicanus
ENSMZEG00005003469	NCBP1	99	82.620	ENSBTAG00000009732	NCBP1	99	87.613	Bos_taurus
ENSMZEG00005003469	NCBP1	100	36.777	WBGene00018156	ncbp-1	100	36.777	Caenorhabditis_elegans
ENSMZEG00005003469	NCBP1	99	82.872	ENSCJAG00000010840	NCBP1	99	86.905	Callithrix_jacchus
ENSMZEG00005003469	NCBP1	99	82.746	ENSCAFG00000002445	NCBP1	99	83.123	Canis_familiaris
ENSMZEG00005003469	NCBP1	98	82.481	ENSCAFG00020017997	NCBP1	96	88.778	Canis_lupus_dingo
ENSMZEG00005003469	NCBP1	99	82.494	ENSCHIG00000020139	NCBP1	99	82.872	Capra_hircus
ENSMZEG00005003469	NCBP1	50	89.000	ENSTSYG00000011914	NCBP1	98	87.461	Carlito_syrichta
ENSMZEG00005003469	NCBP1	81	75.232	ENSCAPG00000014252	NCBP1	90	75.232	Cavia_aperea
ENSMZEG00005003469	NCBP1	95	82.166	ENSCPOG00000012573	NCBP1	98	82.563	Cavia_porcellus
ENSMZEG00005003469	NCBP1	99	82.746	ENSCCAG00000032297	NCBP1	99	83.123	Cebus_capucinus
ENSMZEG00005003469	NCBP1	99	82.746	ENSCATG00000010052	NCBP1	99	83.123	Cercocebus_atys
ENSMZEG00005003469	NCBP1	99	82.746	ENSCLAG00000014339	NCBP1	99	83.123	Chinchilla_lanigera
ENSMZEG00005003469	NCBP1	99	82.746	ENSCSAG00000010929	NCBP1	99	83.123	Chlorocebus_sabaeus
ENSMZEG00005003469	NCBP1	89	81.132	ENSCHOG00000010332	NCBP1	91	77.391	Choloepus_hoffmanni
ENSMZEG00005003469	NCBP1	99	81.360	ENSCPBG00000024344	NCBP1	99	83.747	Chrysemys_picta_bellii
ENSMZEG00005003469	NCBP1	99	53.778	ENSCING00000008990	-	99	53.778	Ciona_intestinalis
ENSMZEG00005003469	NCBP1	99	53.625	ENSCSAVG00000005300	-	99	54.124	Ciona_savignyi
ENSMZEG00005003469	NCBP1	99	82.746	ENSCANG00000036913	NCBP1	99	83.123	Colobus_angolensis_palliatus
ENSMZEG00005003469	NCBP1	99	82.494	ENSCGRG00001015771	Ncbp1	99	82.872	Cricetulus_griseus_chok1gshd
ENSMZEG00005003469	NCBP1	99	82.398	ENSCGRG00000010311	Ncbp1	99	82.781	Cricetulus_griseus_crigri
ENSMZEG00005003469	NCBP1	100	95.472	ENSCSEG00000012377	NCBP1	100	95.472	Cynoglossus_semilaevis
ENSMZEG00005003469	NCBP1	100	94.347	ENSCVAG00000008795	NCBP1	100	94.347	Cyprinodon_variegatus
ENSMZEG00005003469	NCBP1	99	82.116	ENSDNOG00000006885	NCBP1	99	82.494	Dasypus_novemcinctus
ENSMZEG00005003469	NCBP1	99	79.093	ENSDORG00000013652	Ncbp1	99	79.471	Dipodomys_ordii
ENSMZEG00005003469	NCBP1	99	56.807	FBgn0022942	Cbp80	99	57.447	Drosophila_melanogaster
ENSMZEG00005003469	NCBP1	83	33.137	FBgn0038887	CG7907	87	33.137	Drosophila_melanogaster
ENSMZEG00005003469	NCBP1	89	78.571	ENSETEG00000009705	NCBP1	89	78.571	Echinops_telfairi
ENSMZEG00005003469	NCBP1	99	74.088	ENSEBUG00000008386	NCBP1	99	74.088	Eptatretus_burgeri
ENSMZEG00005003469	NCBP1	99	82.242	ENSEASG00005022795	NCBP1	99	82.620	Equus_asinus_asinus
ENSMZEG00005003469	NCBP1	99	82.368	ENSECAG00000013847	NCBP1	99	82.746	Equus_caballus
ENSMZEG00005003469	NCBP1	96	78.449	ENSEEUG00000015973	NCBP1	100	78.975	Erinaceus_europaeus
ENSMZEG00005003469	NCBP1	100	91.206	ENSELUG00000022519	NCBP1	100	91.206	Esox_lucius
ENSMZEG00005003469	NCBP1	99	82.620	ENSFCAG00000001206	NCBP1	99	82.997	Felis_catus
ENSMZEG00005003469	NCBP1	98	83.822	ENSFALG00000001193	NCBP1	99	84.606	Ficedula_albicollis
ENSMZEG00005003469	NCBP1	99	82.494	ENSFDAG00000010864	NCBP1	99	82.872	Fukomys_damarensis
ENSMZEG00005003469	NCBP1	100	94.598	ENSFHEG00000000655	NCBP1	100	94.598	Fundulus_heteroclitus
ENSMZEG00005003469	NCBP1	100	90.075	ENSGMOG00000008653	NCBP1	99	90.075	Gadus_morhua
ENSMZEG00005003469	NCBP1	98	84.399	ENSGALG00000002087	NCBP1	99	84.171	Gallus_gallus
ENSMZEG00005003469	NCBP1	100	95.477	ENSGAFG00000017787	NCBP1	100	95.477	Gambusia_affinis
ENSMZEG00005003469	NCBP1	100	93.233	ENSGACG00000016772	NCBP1	99	93.233	Gasterosteus_aculeatus
ENSMZEG00005003469	NCBP1	99	83.501	ENSGAGG00000019483	NCBP1	99	84.151	Gopherus_agassizii
ENSMZEG00005003469	NCBP1	99	82.746	ENSGGOG00000001376	NCBP1	99	83.123	Gorilla_gorilla
ENSMZEG00005003469	NCBP1	100	100.000	ENSHBUG00000020843	NCBP1	100	100.000	Haplochromis_burtoni
ENSMZEG00005003469	NCBP1	99	82.746	ENSHGLG00000001882	NCBP1	99	83.123	Heterocephalus_glaber_female
ENSMZEG00005003469	NCBP1	99	72.613	ENSHGLG00000018112	-	99	72.613	Heterocephalus_glaber_female
ENSMZEG00005003469	NCBP1	99	72.362	ENSHGLG00100017373	-	99	72.362	Heterocephalus_glaber_male
ENSMZEG00005003469	NCBP1	99	82.746	ENSHGLG00100013014	NCBP1	99	83.123	Heterocephalus_glaber_male
ENSMZEG00005003469	NCBP1	74	87.352	ENSHCOG00000000204	NCBP1	87	87.352	Hippocampus_comes
ENSMZEG00005003469	NCBP1	100	89.573	ENSIPUG00000007275	ncbp1	100	89.573	Ictalurus_punctatus
ENSMZEG00005003469	NCBP1	99	82.872	ENSSTOG00000002695	NCBP1	99	83.249	Ictidomys_tridecemlineatus
ENSMZEG00005003469	NCBP1	100	94.340	ENSKMAG00000003594	NCBP1	100	94.340	Kryptolebias_marmoratus
ENSMZEG00005003469	NCBP1	100	93.424	ENSLBEG00000011661	NCBP1	100	93.424	Labrus_bergylta
ENSMZEG00005003469	NCBP1	99	78.082	ENSLACG00000013955	NCBP1	99	78.483	Latimeria_chalumnae
ENSMZEG00005003469	NCBP1	99	77.210	ENSLOCG00000009579	NCBP1	99	77.709	Lepisosteus_oculatus
ENSMZEG00005003469	NCBP1	99	82.620	ENSLAFG00000005999	NCBP1	99	82.997	Loxodonta_africana
ENSMZEG00005003469	NCBP1	99	82.746	ENSMFAG00000030994	NCBP1	99	83.123	Macaca_fascicularis
ENSMZEG00005003469	NCBP1	98	82.503	ENSMMUG00000012281	NCBP1	99	82.886	Macaca_mulatta
ENSMZEG00005003469	NCBP1	99	82.746	ENSMNEG00000042790	NCBP1	99	83.123	Macaca_nemestrina
ENSMZEG00005003469	NCBP1	99	82.746	ENSMLEG00000030374	NCBP1	99	83.123	Mandrillus_leucophaeus
ENSMZEG00005003469	NCBP1	100	95.849	ENSMAMG00000014806	NCBP1	100	95.849	Mastacembelus_armatus
ENSMZEG00005003469	NCBP1	97	97.416	ENSMZEG00005009290	-	100	97.416	Maylandia_zebra
ENSMZEG00005003469	NCBP1	99	81.899	ENSMAUG00000020583	Ncbp1	99	82.278	Mesocricetus_auratus
ENSMZEG00005003469	NCBP1	99	82.242	ENSMICG00000012682	NCBP1	99	82.620	Microcebus_murinus
ENSMZEG00005003469	NCBP1	99	82.368	ENSMOCG00000015818	Ncbp1	99	82.746	Microtus_ochrogaster
ENSMZEG00005003469	NCBP1	91	93.204	ENSMMOG00000002610	NCBP1	100	93.204	Mola_mola
ENSMZEG00005003469	NCBP1	99	82.494	ENSMODG00000003202	NCBP1	99	82.620	Monodelphis_domestica
ENSMZEG00005003469	NCBP1	100	95.849	ENSMALG00000003547	NCBP1	100	95.849	Monopterus_albus
ENSMZEG00005003469	NCBP1	99	82.620	MGP_CAROLIEiJ_G0025982	Ncbp1	99	82.997	Mus_caroli
ENSMZEG00005003469	NCBP1	99	82.620	ENSMUSG00000028330	Ncbp1	99	82.997	Mus_musculus
ENSMZEG00005003469	NCBP1	99	82.620	MGP_PahariEiJ_G0028318	Ncbp1	99	82.997	Mus_pahari
ENSMZEG00005003469	NCBP1	99	82.620	MGP_SPRETEiJ_G0026945	Ncbp1	99	82.997	Mus_spretus
ENSMZEG00005003469	NCBP1	99	82.872	ENSMPUG00000006399	NCBP1	99	83.249	Mustela_putorius_furo
ENSMZEG00005003469	NCBP1	98	81.609	ENSMLUG00000015201	NCBP1	99	81.992	Myotis_lucifugus
ENSMZEG00005003469	NCBP1	99	83.249	ENSNGAG00000014101	Ncbp1	99	83.249	Nannospalax_galili
ENSMZEG00005003469	NCBP1	76	100.000	ENSNBRG00000014674	NCBP1	97	100.000	Neolamprologus_brichardi
ENSMZEG00005003469	NCBP1	99	82.746	ENSNLEG00000016909	NCBP1	99	83.123	Nomascus_leucogenys
ENSMZEG00005003469	NCBP1	89	82.255	ENSMEUG00000010672	NCBP1	90	82.255	Notamacropus_eugenii
ENSMZEG00005003469	NCBP1	84	74.916	ENSOPRG00000002144	-	88	75.589	Ochotona_princeps
ENSMZEG00005003469	NCBP1	99	82.620	ENSODEG00000003232	NCBP1	99	82.997	Octodon_degus
ENSMZEG00005003469	NCBP1	100	99.119	ENSONIG00000001502	NCBP1	100	99.119	Oreochromis_niloticus
ENSMZEG00005003469	NCBP1	78	85.714	ENSOANG00000001918	NCBP1	100	85.714	Ornithorhynchus_anatinus
ENSMZEG00005003469	NCBP1	98	82.436	ENSOCUG00000013853	NCBP1	97	82.821	Oryctolagus_cuniculus
ENSMZEG00005003469	NCBP1	100	94.243	ENSORLG00000011008	NCBP1	100	94.243	Oryzias_latipes
ENSMZEG00005003469	NCBP1	100	94.493	ENSORLG00020017455	NCBP1	100	94.493	Oryzias_latipes_hni
ENSMZEG00005003469	NCBP1	100	94.368	ENSORLG00015012127	NCBP1	100	94.368	Oryzias_latipes_hsok
ENSMZEG00005003469	NCBP1	100	94.618	ENSOMEG00000020698	NCBP1	100	94.618	Oryzias_melastigma
ENSMZEG00005003469	NCBP1	99	82.663	ENSOGAG00000013888	NCBP1	99	83.040	Otolemur_garnettii
ENSMZEG00005003469	NCBP1	99	82.494	ENSOARG00000011233	NCBP1	99	82.872	Ovis_aries
ENSMZEG00005003469	NCBP1	99	82.746	ENSPPAG00000026462	NCBP1	99	83.123	Pan_paniscus
ENSMZEG00005003469	NCBP1	99	82.746	ENSPPRG00000022574	NCBP1	99	83.123	Panthera_pardus
ENSMZEG00005003469	NCBP1	99	82.746	ENSPTIG00000018507	NCBP1	99	83.123	Panthera_tigris_altaica
ENSMZEG00005003469	NCBP1	99	82.746	ENSPTRG00000021167	NCBP1	99	83.123	Pan_troglodytes
ENSMZEG00005003469	NCBP1	99	82.746	ENSPANG00000025591	NCBP1	99	83.123	Papio_anubis
ENSMZEG00005003469	NCBP1	99	87.909	ENSPKIG00000015861	NCBP1	99	87.909	Paramormyrops_kingsleyae
ENSMZEG00005003469	NCBP1	64	81.800	ENSPSIG00000009558	NCBP1	99	82.812	Pelodiscus_sinensis
ENSMZEG00005003469	NCBP1	100	88.972	ENSPMGG00000020476	NCBP1	100	88.972	Periophthalmus_magnuspinnatus
ENSMZEG00005003469	NCBP1	99	82.116	ENSPEMG00000020105	Ncbp1	99	82.494	Peromyscus_maniculatus_bairdii
ENSMZEG00005003469	NCBP1	99	68.625	ENSPMAG00000005533	NCBP1	99	68.625	Petromyzon_marinus
ENSMZEG00005003469	NCBP1	99	82.368	ENSPCIG00000015800	NCBP1	99	85.463	Phascolarctos_cinereus
ENSMZEG00005003469	NCBP1	100	94.994	ENSPFOG00000004158	NCBP1	100	94.994	Poecilia_formosa
ENSMZEG00005003469	NCBP1	100	95.352	ENSPLAG00000020002	NCBP1	100	95.352	Poecilia_latipinna
ENSMZEG00005003469	NCBP1	100	95.352	ENSPMEG00000019821	NCBP1	100	95.352	Poecilia_mexicana
ENSMZEG00005003469	NCBP1	100	95.107	ENSPREG00000006035	NCBP1	100	95.107	Poecilia_reticulata
ENSMZEG00005003469	NCBP1	99	82.746	ENSPPYG00000019426	NCBP1	99	83.123	Pongo_abelii
ENSMZEG00005003469	NCBP1	90	80.967	ENSPCAG00000009943	NCBP1	90	80.967	Procavia_capensis
ENSMZEG00005003469	NCBP1	82	88.158	ENSPCOG00000020024	NCBP1	98	88.158	Propithecus_coquereli
ENSMZEG00005003469	NCBP1	99	82.368	ENSPVAG00000005924	NCBP1	99	82.746	Pteropus_vampyrus
ENSMZEG00005003469	NCBP1	91	99.028	ENSPNYG00000002140	NCBP1	99	99.028	Pundamilia_nyererei
ENSMZEG00005003469	NCBP1	100	89.962	ENSPNAG00000027753	NCBP1	100	89.962	Pygocentrus_nattereri
ENSMZEG00005003469	NCBP1	99	82.620	ENSRNOG00000023605	Ncbp1	99	82.997	Rattus_norvegicus
ENSMZEG00005003469	NCBP1	99	82.746	ENSRBIG00000043175	NCBP1	99	83.123	Rhinopithecus_bieti
ENSMZEG00005003469	NCBP1	99	82.746	ENSRROG00000029767	NCBP1	99	83.123	Rhinopithecus_roxellana
ENSMZEG00005003469	NCBP1	99	82.746	ENSSBOG00000019378	NCBP1	98	88.049	Saimiri_boliviensis_boliviensis
ENSMZEG00005003469	NCBP1	67	78.626	ENSSHAG00000015882	NCBP1	71	79.008	Sarcophilus_harrisii
ENSMZEG00005003469	NCBP1	98	86.335	ENSSFOG00015001872	NCBP1	99	85.516	Scleropages_formosus
ENSMZEG00005003469	NCBP1	100	94.088	ENSSMAG00000007463	NCBP1	100	94.088	Scophthalmus_maximus
ENSMZEG00005003469	NCBP1	100	95.094	ENSSDUG00000007019	NCBP1	100	95.885	Seriola_dumerili
ENSMZEG00005003469	NCBP1	100	95.849	ENSSLDG00000021924	NCBP1	100	95.849	Seriola_lalandi_dorsalis
ENSMZEG00005003469	NCBP1	85	71.212	ENSSARG00000007274	NCBP1	86	71.861	Sorex_araneus
ENSMZEG00005003469	NCBP1	99	77.960	ENSSPUG00000008609	NCBP1	99	77.960	Sphenodon_punctatus
ENSMZEG00005003469	NCBP1	100	97.107	ENSSPAG00000012550	NCBP1	100	97.107	Stegastes_partitus
ENSMZEG00005003469	NCBP1	99	82.494	ENSSSCG00000005366	NCBP1	99	82.872	Sus_scrofa
ENSMZEG00005003469	NCBP1	99	78.715	ENSTGUG00000001472	NCBP1	99	79.748	Taeniopygia_guttata
ENSMZEG00005003469	NCBP1	100	93.711	ENSTRUG00000005287	NCBP1	100	93.711	Takifugu_rubripes
ENSMZEG00005003469	NCBP1	99	80.353	ENSTBEG00000004035	NCBP1	99	80.730	Tupaia_belangeri
ENSMZEG00005003469	NCBP1	88	85.222	ENSTTRG00000000507	NCBP1	88	85.222	Tursiops_truncatus
ENSMZEG00005003469	NCBP1	99	82.620	ENSUAMG00000005471	NCBP1	99	82.997	Ursus_americanus
ENSMZEG00005003469	NCBP1	97	80.466	ENSUMAG00000011865	NCBP1	99	82.387	Ursus_maritimus
ENSMZEG00005003469	NCBP1	99	78.967	ENSVPAG00000010537	NCBP1	99	79.345	Vicugna_pacos
ENSMZEG00005003469	NCBP1	99	82.746	ENSVVUG00000019725	NCBP1	99	83.123	Vulpes_vulpes
ENSMZEG00005003469	NCBP1	99	78.589	ENSXETG00000010179	ncbp1	99	78.589	Xenopus_tropicalis
ENSMZEG00005003469	NCBP1	100	95.477	ENSXMAG00000018253	NCBP1	100	95.477	Xiphophorus_maculatus