EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005003550 (Gene tree)
Gene ID: 101482700
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 5830 bases
Position: chrLG15:15823711-15829540
Accession: 101482700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005004582	RRM_1	PF00076.22	6.1e-32	1	2
ENSMZEP00005004582	RRM_1	PF00076.22	6.1e-32	2	2
ENSMZEP00005004593	RRM_1	PF00076.22	6.1e-32	1	2
ENSMZEP00005004593	RRM_1	PF00076.22	6.1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005004796	-	1160	XM_004550533	ENSMZEP00005004593	293 (aa)	XP_004550590	UPI00022AF7CB
ENSMZET00005004785	-	1225	XM_012918987	ENSMZEP00005004582	293 (aa)	XP_012774441	UPI00022AF7CB

Gene Model

Click here to download ENSMZEG00005003550's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG
mze05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005003550's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005003550	srsf5b	63	84.324	ENSG00000100650	SRSF5	98	76.562	Homo_sapiens
ENSMZEG00005003550	srsf5b	100	96.246	ENSAPOG00000008642	srsf5b	100	96.246	Acanthochromis_polyacanthus
ENSMZEG00005003550	srsf5b	63	84.324	ENSAMEG00000014574	SRSF5	92	70.943	Ailuropoda_melanoleuca
ENSMZEG00005003550	srsf5b	100	99.320	ENSACIG00000010742	srsf5b	100	99.320	Amphilophus_citrinellus
ENSMZEG00005003550	srsf5b	100	96.246	ENSAOCG00000005719	srsf5b	100	96.246	Amphiprion_ocellaris
ENSMZEG00005003550	srsf5b	100	96.246	ENSAPEG00000007830	srsf5b	100	96.246	Amphiprion_percula
ENSMZEG00005003550	srsf5b	100	96.246	ENSATEG00000019112	srsf5b	100	96.246	Anabas_testudineus
ENSMZEG00005003550	srsf5b	61	82.022	ENSAPLG00000014681	SRSF5	69	78.836	Anas_platyrhynchos
ENSMZEG00005003550	srsf5b	63	84.324	ENSACAG00000005143	SRSF5	93	73.408	Anolis_carolinensis
ENSMZEG00005003550	srsf5b	63	84.324	ENSANAG00000027977	-	76	90.667	Aotus_nancymaae
ENSMZEG00005003550	srsf5b	100	100.000	ENSACLG00000026424	srsf5b	100	100.000	Astatotilapia_calliptera
ENSMZEG00005003550	srsf5b	65	94.180	ENSAMXG00000011932	srsf5b	84	94.531	Astyanax_mexicanus
ENSMZEG00005003550	srsf5b	63	84.324	ENSBTAG00000011596	SRSF5	92	70.943	Bos_taurus
ENSMZEG00005003550	srsf5b	63	84.324	ENSCJAG00000014884	SRSF5	76	90.667	Callithrix_jacchus
ENSMZEG00005003550	srsf5b	63	84.324	ENSCAFG00000016589	SRSF5	92	70.943	Canis_familiaris
ENSMZEG00005003550	srsf5b	63	84.324	ENSCAFG00020005661	SRSF5	92	70.943	Canis_lupus_dingo
ENSMZEG00005003550	srsf5b	63	82.162	ENSCHIG00000016794	SRSF5	92	70.943	Capra_hircus
ENSMZEG00005003550	srsf5b	63	84.324	ENSTSYG00000007786	SRSF5	98	70.076	Carlito_syrichta
ENSMZEG00005003550	srsf5b	63	82.162	ENSCAPG00000008801	SRSF5	92	70.943	Cavia_aperea
ENSMZEG00005003550	srsf5b	63	82.162	ENSCPOG00000039926	SRSF5	92	71.321	Cavia_porcellus
ENSMZEG00005003550	srsf5b	63	84.324	ENSCCAG00000029002	SRSF5	76	90.667	Cebus_capucinus
ENSMZEG00005003550	srsf5b	63	84.324	ENSCATG00000045051	SRSF5	76	90.667	Cercocebus_atys
ENSMZEG00005003550	srsf5b	63	84.324	ENSCLAG00000004755	SRSF5	67	81.481	Chinchilla_lanigera
ENSMZEG00005003550	srsf5b	63	84.324	ENSCSAG00000013041	SRSF5	93	71.910	Chlorocebus_sabaeus
ENSMZEG00005003550	srsf5b	63	82.703	ENSCPBG00000021653	SRSF5	68	82.011	Chrysemys_picta_bellii
ENSMZEG00005003550	srsf5b	63	84.324	ENSCANG00000030560	SRSF5	76	90.667	Colobus_angolensis_palliatus
ENSMZEG00005003550	srsf5b	63	84.324	ENSCGRG00001015339	Srsf5	93	67.188	Cricetulus_griseus_chok1gshd
ENSMZEG00005003550	srsf5b	63	84.324	ENSCGRG00000009833	Srsf5	93	70.566	Cricetulus_griseus_crigri
ENSMZEG00005003550	srsf5b	84	93.522	ENSCSEG00000003801	srsf5b	100	91.525	Cynoglossus_semilaevis
ENSMZEG00005003550	srsf5b	92	86.851	ENSCVAG00000017240	srsf5b	88	87.108	Cyprinodon_variegatus
ENSMZEG00005003550	srsf5b	63	94.054	ENSDARG00000027734	srsf5b	90	93.750	Danio_rerio
ENSMZEG00005003550	srsf5b	63	84.324	ENSDNOG00000006160	SRSF5	93	70.943	Dasypus_novemcinctus
ENSMZEG00005003550	srsf5b	63	84.324	ENSDORG00000003989	Srsf5	93	64.151	Dipodomys_ordii
ENSMZEG00005003550	srsf5b	63	78.804	ENSETEG00000020396	SRSF5	68	78.723	Echinops_telfairi
ENSMZEG00005003550	srsf5b	64	62.755	ENSEBUG00000006229	srsf5b	91	51.429	Eptatretus_burgeri
ENSMZEG00005003550	srsf5b	63	84.324	ENSEASG00005016615	SRSF5	92	70.943	Equus_asinus_asinus
ENSMZEG00005003550	srsf5b	63	84.324	ENSECAG00000026873	SRSF5	88	76.562	Equus_caballus
ENSMZEG00005003550	srsf5b	92	72.368	ENSELUG00000019852	srsf5b	85	85.417	Esox_lucius
ENSMZEG00005003550	srsf5b	63	84.324	ENSFCAG00000008848	SRSF5	75	90.667	Felis_catus
ENSMZEG00005003550	srsf5b	63	81.522	ENSFALG00000004979	SRSF5	87	62.963	Ficedula_albicollis
ENSMZEG00005003550	srsf5b	63	84.324	ENSFDAG00000011562	SRSF5	68	81.481	Fukomys_damarensis
ENSMZEG00005003550	srsf5b	92	92.308	ENSFHEG00000009476	srsf5b	88	92.251	Fundulus_heteroclitus
ENSMZEG00005003550	srsf5b	64	80.088	ENSGMOG00000000595	srsf5b	99	80.088	Gadus_morhua
ENSMZEG00005003550	srsf5b	63	80.978	ENSGALG00000009421	SRSF5	88	75.781	Gallus_gallus
ENSMZEG00005003550	srsf5b	92	94.052	ENSGAFG00000002865	srsf5b	100	91.060	Gambusia_affinis
ENSMZEG00005003550	srsf5b	100	68.839	ENSGACG00000007834	srsf5b	86	87.500	Gasterosteus_aculeatus
ENSMZEG00005003550	srsf5b	63	82.703	ENSGAGG00000004447	SRSF5	68	82.011	Gopherus_agassizii
ENSMZEG00005003550	srsf5b	63	84.324	ENSGGOG00000016462	SRSF5	76	90.667	Gorilla_gorilla
ENSMZEG00005003550	srsf5b	100	99.659	ENSHBUG00000012462	srsf5b	100	99.659	Haplochromis_burtoni
ENSMZEG00005003550	srsf5b	63	83.784	ENSHGLG00000010147	SRSF5	93	70.566	Heterocephalus_glaber_female
ENSMZEG00005003550	srsf5b	63	83.784	ENSHGLG00100015328	SRSF5	93	70.566	Heterocephalus_glaber_male
ENSMZEG00005003550	srsf5b	61	59.218	ENSHGLG00100000095	-	62	58.889	Heterocephalus_glaber_male
ENSMZEG00005003550	srsf5b	64	88.542	ENSHCOG00000005592	srsf5b	100	76.412	Hippocampus_comes
ENSMZEG00005003550	srsf5b	63	84.324	ENSSTOG00000020672	SRSF5	93	70.943	Ictidomys_tridecemlineatus
ENSMZEG00005003550	srsf5b	63	84.324	ENSJJAG00000001688	Srsf5	92	70.943	Jaculus_jaculus
ENSMZEG00005003550	srsf5b	92	93.680	ENSKMAG00000020486	srsf5b	100	90.033	Kryptolebias_marmoratus
ENSMZEG00005003550	srsf5b	100	94.237	ENSLBEG00000013647	srsf5b	100	94.576	Labrus_bergylta
ENSMZEG00005003550	srsf5b	63	84.783	ENSLACG00000005874	SRSF5	91	74.131	Latimeria_chalumnae
ENSMZEG00005003550	srsf5b	63	86.772	ENSLOCG00000012438	srsf5b	70	83.938	Lepisosteus_oculatus
ENSMZEG00005003550	srsf5b	63	83.784	ENSLAFG00000005260	SRSF5	67	80.952	Loxodonta_africana
ENSMZEG00005003550	srsf5b	63	84.324	ENSMFAG00000002393	SRSF5	76	90.667	Macaca_fascicularis
ENSMZEG00005003550	srsf5b	63	84.324	ENSMNEG00000030872	SRSF5	76	90.667	Macaca_nemestrina
ENSMZEG00005003550	srsf5b	63	84.324	ENSMLEG00000030017	SRSF5	76	90.667	Mandrillus_leucophaeus
ENSMZEG00005003550	srsf5b	100	95.222	ENSMAMG00000002673	srsf5b	100	95.222	Mastacembelus_armatus
ENSMZEG00005003550	srsf5b	63	84.324	ENSMAUG00000009544	Srsf5	93	70.566	Mesocricetus_auratus
ENSMZEG00005003550	srsf5b	63	84.324	ENSMICG00000037432	-	76	90.667	Microcebus_murinus
ENSMZEG00005003550	srsf5b	63	84.324	ENSMOCG00000013134	Srsf5	93	70.566	Microtus_ochrogaster
ENSMZEG00005003550	srsf5b	63	96.216	ENSMMOG00000000137	srsf5b	80	96.154	Mola_mola
ENSMZEG00005003550	srsf5b	63	82.703	ENSMODG00000011362	SRSF5	93	72.285	Monodelphis_domestica
ENSMZEG00005003550	srsf5b	100	94.257	ENSMALG00000021875	srsf5b	100	94.932	Monopterus_albus
ENSMZEG00005003550	srsf5b	63	84.324	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSMZEG00005003550	srsf5b	63	84.324	MGP_PahariEiJ_G0029659	Srsf5	93	70.566	Mus_pahari
ENSMZEG00005003550	srsf5b	63	84.324	ENSMPUG00000007458	SRSF5	92	70.943	Mustela_putorius_furo
ENSMZEG00005003550	srsf5b	63	82.162	ENSMLUG00000011939	SRSF5	91	65.543	Myotis_lucifugus
ENSMZEG00005003550	srsf5b	63	84.324	ENSNGAG00000010073	-	93	70.566	Nannospalax_galili
ENSMZEG00005003550	srsf5b	100	98.305	ENSNBRG00000001285	srsf5b	100	98.305	Neolamprologus_brichardi
ENSMZEG00005003550	srsf5b	63	84.324	ENSNLEG00000001615	SRSF5	76	90.667	Nomascus_leucogenys
ENSMZEG00005003550	srsf5b	63	82.162	ENSOPRG00000008286	SRSF5	91	72.015	Ochotona_princeps
ENSMZEG00005003550	srsf5b	63	82.162	ENSODEG00000013469	-	93	71.747	Octodon_degus
ENSMZEG00005003550	srsf5b	63	80.541	ENSODEG00000000700	-	69	79.365	Octodon_degus
ENSMZEG00005003550	srsf5b	100	100.000	ENSONIG00000005759	srsf5b	100	100.000	Oreochromis_niloticus
ENSMZEG00005003550	srsf5b	63	78.378	ENSOANG00000013336	SRSF5	94	67.925	Ornithorhynchus_anatinus
ENSMZEG00005003550	srsf5b	63	82.162	ENSOCUG00000009274	SRSF5	91	70.943	Oryctolagus_cuniculus
ENSMZEG00005003550	srsf5b	100	81.308	ENSORLG00000029854	srsf5b	100	80.062	Oryzias_latipes
ENSMZEG00005003550	srsf5b	92	90.406	ENSORLG00015001720	srsf5b	100	90.169	Oryzias_latipes_hsok
ENSMZEG00005003550	srsf5b	93	89.781	ENSOMEG00000020690	srsf5b	67	89.668	Oryzias_melastigma
ENSMZEG00005003550	srsf5b	63	84.324	ENSOGAG00000015122	SRSF5	93	70.943	Otolemur_garnettii
ENSMZEG00005003550	srsf5b	63	84.324	ENSPPAG00000029921	SRSF5	76	90.667	Pan_paniscus
ENSMZEG00005003550	srsf5b	63	84.324	ENSPPRG00000012903	SRSF5	75	90.667	Panthera_pardus
ENSMZEG00005003550	srsf5b	63	84.324	ENSPTIG00000018589	SRSF5	75	90.667	Panthera_tigris_altaica
ENSMZEG00005003550	srsf5b	63	84.324	ENSPTRG00000006488	SRSF5	76	90.667	Pan_troglodytes
ENSMZEG00005003550	srsf5b	63	84.324	ENSPANG00000021091	SRSF5	76	90.667	Papio_anubis
ENSMZEG00005003550	srsf5b	63	82.703	ENSPSIG00000012522	SRSF5	95	61.616	Pelodiscus_sinensis
ENSMZEG00005003550	srsf5b	63	84.324	ENSPEMG00000020173	Srsf5	93	67.188	Peromyscus_maniculatus_bairdii
ENSMZEG00005003550	srsf5b	65	61.616	ENSPMAG00000007790	srsf5b	86	53.208	Petromyzon_marinus
ENSMZEG00005003550	srsf5b	63	82.703	ENSPCIG00000011877	SRSF5	93	72.285	Phascolarctos_cinereus
ENSMZEG00005003550	srsf5b	92	94.052	ENSPFOG00000017700	srsf5b	100	91.060	Poecilia_formosa
ENSMZEG00005003550	srsf5b	92	93.704	ENSPLAG00000006480	srsf5b	100	90.759	Poecilia_latipinna
ENSMZEG00005003550	srsf5b	92	94.052	ENSPMEG00000012751	srsf5b	100	91.060	Poecilia_mexicana
ENSMZEG00005003550	srsf5b	92	94.052	ENSPREG00000010381	srsf5b	100	91.060	Poecilia_reticulata
ENSMZEG00005003550	srsf5b	63	84.324	ENSPPYG00000005945	SRSF5	93	71.910	Pongo_abelii
ENSMZEG00005003550	srsf5b	52	80.392	ENSPCAG00000004405	SRSF5	100	79.605	Procavia_capensis
ENSMZEG00005003550	srsf5b	63	84.324	ENSPCOG00000014442	SRSF5	88	76.562	Propithecus_coquereli
ENSMZEG00005003550	srsf5b	100	97.270	ENSPNYG00000002669	srsf5b	100	97.270	Pundamilia_nyererei
ENSMZEG00005003550	srsf5b	65	94.180	ENSPNAG00000011262	srsf5b	84	93.750	Pygocentrus_nattereri
ENSMZEG00005003550	srsf5b	63	84.324	ENSRNOG00000005513	Srsf5	93	67.188	Rattus_norvegicus
ENSMZEG00005003550	srsf5b	63	84.324	ENSRBIG00000013003	SRSF5	76	90.667	Rhinopithecus_bieti
ENSMZEG00005003550	srsf5b	63	84.324	ENSRROG00000043407	SRSF5	76	90.667	Rhinopithecus_roxellana
ENSMZEG00005003550	srsf5b	63	84.324	ENSSBOG00000030784	SRSF5	76	90.667	Saimiri_boliviensis_boliviensis
ENSMZEG00005003550	srsf5b	63	82.703	ENSSHAG00000002871	SRSF5	93	72.285	Sarcophilus_harrisii
ENSMZEG00005003550	srsf5b	93	82.724	ENSSMAG00000019728	srsf5b	91	83.221	Scophthalmus_maximus
ENSMZEG00005003550	srsf5b	89	96.169	ENSSDUG00000005766	srsf5b	92	96.169	Seriola_dumerili
ENSMZEG00005003550	srsf5b	100	95.904	ENSSLDG00000023255	srsf5b	100	95.904	Seriola_lalandi_dorsalis
ENSMZEG00005003550	srsf5b	63	81.481	ENSSPUG00000002464	SRSF5	99	69.366	Sphenodon_punctatus
ENSMZEG00005003550	srsf5b	100	97.270	ENSSPAG00000015325	srsf5b	100	97.270	Stegastes_partitus
ENSMZEG00005003550	srsf5b	63	84.324	ENSSSCG00000032583	SRSF5	92	70.566	Sus_scrofa
ENSMZEG00005003550	srsf5b	63	81.522	ENSTGUG00000011425	SRSF5	88	62.500	Taeniopygia_guttata
ENSMZEG00005003550	srsf5b	64	92.021	ENSTRUG00000017811	srsf5b	100	76.471	Takifugu_rubripes
ENSMZEG00005003550	srsf5b	94	81.455	ENSTNIG00000016411	srsf5b	95	84.015	Tetraodon_nigroviridis
ENSMZEG00005003550	srsf5b	63	82.162	ENSTBEG00000001972	SRSF5	93	70.037	Tupaia_belangeri
ENSMZEG00005003550	srsf5b	62	82.065	ENSTTRG00000003318	SRSF5	92	70.833	Tursiops_truncatus
ENSMZEG00005003550	srsf5b	63	84.324	ENSUAMG00000014184	SRSF5	92	70.943	Ursus_americanus
ENSMZEG00005003550	srsf5b	63	87.097	ENSUMAG00000009827	SRSF5	92	64.151	Ursus_maritimus
ENSMZEG00005003550	srsf5b	63	84.324	ENSVPAG00000006448	SRSF5	93	70.943	Vicugna_pacos
ENSMZEG00005003550	srsf5b	63	84.324	ENSVVUG00000003790	SRSF5	92	70.943	Vulpes_vulpes
ENSMZEG00005003550	srsf5b	64	82.979	ENSXETG00000002211	srsf5	93	73.234	Xenopus_tropicalis
ENSMZEG00005003550	srsf5b	92	84.815	ENSXCOG00000001570	srsf5b	100	88.119	Xiphophorus_couchianus
ENSMZEG00005003550	srsf5b	92	93.333	ENSXMAG00000026416	srsf5b	100	90.429	Xiphophorus_maculatus