EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMZEG00005003889 (Gene tree)
Gene ID
101484169
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Maylandia_zebra
Status
putative
Strand
Plus strand
Length
15527 bases
Position
chrLG4:6420919-6436445
Accession
101484169
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMZEP00005005138ResIIIPF04851.157.7e-0911
ENSMZEP00005005122ResIIIPF04851.157.8e-0911
ENSMZEP00005005138BRKPF07533.166.7e-1711
ENSMZEP00005005122BRKPF07533.166.8e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMZET00005005363-4854-ENSMZEP000050051381617 (aa)--
ENSMZET00005005346-5915XM_004562962ENSMZEP000050051221629 (aa)XP_004563019UPI00032A2268
Gene Model
Click here to download ENSMZEG00005003889's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005003889's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMZEG00005003889smarca4a10087.401ENSG00000127616SMARCA49995.652Homo_sapiens
ENSMZEG00005003889smarca4a9584.769ENSAPOG00000004542SMARCA49986.132Acanthochromis_polyacanthus
ENSMZEG00005003889smarca4a7793.577ENSAPOG00000003509smarca4a9892.622Acanthochromis_polyacanthus
ENSMZEG00005003889smarca4a10083.460ENSAMEG00000010868SMARCA410083.578Ailuropoda_melanoleuca
ENSMZEG00005003889smarca4a9486.277ENSACIG00000003035-9786.597Amphilophus_citrinellus
ENSMZEG00005003889smarca4a9997.475ENSACIG00000021550smarca4a9997.475Amphilophus_citrinellus
ENSMZEG00005003889smarca4a9092.735ENSAOCG00000019167smarca4a10092.917Amphiprion_ocellaris
ENSMZEG00005003889smarca4a9388.021ENSAOCG00000009450-9788.087Amphiprion_ocellaris
ENSMZEG00005003889smarca4a10084.104ENSAPEG00000023108-9983.483Amphiprion_percula
ENSMZEG00005003889smarca4a9092.803ENSAPEG00000015559smarca4a10092.986Amphiprion_percula
ENSMZEG00005003889smarca4a10094.850ENSATEG00000011524smarca4a10095.402Anabas_testudineus
ENSMZEG00005003889smarca4a9985.262ENSATEG00000001094-9884.836Anabas_testudineus
ENSMZEG00005003889smarca4a9988.104ENSANAG00000036991SMARCA410084.555Aotus_nancymaae
ENSMZEG00005003889smarca4a10099.691ENSACLG00000000163smarca4a10099.691Astatotilapia_calliptera
ENSMZEG00005003889smarca4a9585.320ENSACLG00000008638-9885.200Astatotilapia_calliptera
ENSMZEG00005003889smarca4a9886.298ENSAMXG00000021023smarca4a9887.404Astyanax_mexicanus
ENSMZEG00005003889smarca4a9487.443ENSAMXG00000011238-9685.683Astyanax_mexicanus
ENSMZEG00005003889smarca4a10087.882ENSBTAG00000019220SMARCA49887.907Bos_taurus
ENSMZEG00005003889smarca4a10083.324ENSCJAG00000005936SMARCA410083.792Callithrix_jacchus
ENSMZEG00005003889smarca4a10087.272ENSCAFG00000017584SMARCA410087.637Canis_familiaris
ENSMZEG00005003889smarca4a10087.272ENSCAFG00020024620SMARCA49987.637Canis_lupus_dingo
ENSMZEG00005003889smarca4a10084.046ENSCHIG00000015318SMARCA49883.980Capra_hircus
ENSMZEG00005003889smarca4a10087.638ENSTSYG00000012966SMARCA410088.005Carlito_syrichta
ENSMZEG00005003889smarca4a9382.102ENSCAPG00000015932SMARCA49489.888Cavia_aperea
ENSMZEG00005003889smarca4a10087.211ENSCPOG00000015549SMARCA410087.454Cavia_porcellus
ENSMZEG00005003889smarca4a10084.080ENSCCAG00000031660SMARCA49984.634Cebus_capucinus
ENSMZEG00005003889smarca4a10087.348ENSCATG00000029530SMARCA410087.652Cercocebus_atys
ENSMZEG00005003889smarca4a10087.630ENSCLAG00000011946SMARCA410087.936Chinchilla_lanigera
ENSMZEG00005003889smarca4a10087.317ENSCPBG00000009994SMARCA410087.317Chrysemys_picta_bellii
ENSMZEG00005003889smarca4a10087.287ENSCANG00000036013SMARCA410087.652Colobus_angolensis_palliatus
ENSMZEG00005003889smarca4a10087.272ENSCGRG00001016732Smarca410087.515Cricetulus_griseus_chok1gshd
ENSMZEG00005003889smarca4a10087.272ENSCGRG00000017242Smarca410087.515Cricetulus_griseus_crigri
ENSMZEG00005003889smarca4a9694.289ENSCSEG00000014771smarca4a10094.492Cynoglossus_semilaevis
ENSMZEG00005003889smarca4a9885.966ENSCVAG00000003018-9885.768Cyprinodon_variegatus
ENSMZEG00005003889smarca4a9993.921ENSCVAG00000006979smarca4a9994.107Cyprinodon_variegatus
ENSMZEG00005003889smarca4a10089.890ENSDARG00000077226smarca4a10089.615Danio_rerio
ENSMZEG00005003889smarca4a9284.416ENSDARG00000104339SMARCA49583.752Danio_rerio
ENSMZEG00005003889smarca4a10079.095ENSDNOG00000048847SMARCA49091.323Dasypus_novemcinctus
ENSMZEG00005003889smarca4a8482.140ENSDORG00000002544Smarca49381.429Dipodomys_ordii
ENSMZEG00005003889smarca4a9476.879ENSETEG00000013361SMARCA49477.038Echinops_telfairi
ENSMZEG00005003889smarca4a10087.272ENSEASG00005006167SMARCA410085.569Equus_asinus_asinus
ENSMZEG00005003889smarca4a10087.333ENSECAG00000008334SMARCA410087.454Equus_caballus
ENSMZEG00005003889smarca4a10090.358ENSELUG00000010247smarca4a10089.933Esox_lucius
ENSMZEG00005003889smarca4a9978.849ENSELUG00000023232-9778.728Esox_lucius
ENSMZEG00005003889smarca4a10087.234ENSFCAG00000004894SMARCA410087.538Felis_catus
ENSMZEG00005003889smarca4a7491.359ENSFALG00000004208SMARCA49286.183Ficedula_albicollis
ENSMZEG00005003889smarca4a9287.251ENSFDAG00000012237SMARCA49788.275Fukomys_damarensis
ENSMZEG00005003889smarca4a9692.646ENSFHEG00000010182smarca4a10092.844Fundulus_heteroclitus
ENSMZEG00005003889smarca4a10085.484ENSFHEG00000007902-9885.894Fundulus_heteroclitus
ENSMZEG00005003889smarca4a8992.373ENSGMOG00000002649smarca4a9489.881Gadus_morhua
ENSMZEG00005003889smarca4a9080.961ENSGMOG00000005756-9080.515Gadus_morhua
ENSMZEG00005003889smarca4a7288.146ENSGALG00000047145SMARCA410087.638Gallus_gallus
ENSMZEG00005003889smarca4a9092.473ENSGAFG00000014900smarca4a9993.342Gambusia_affinis
ENSMZEG00005003889smarca4a9883.702ENSGAFG00000008827-9883.239Gambusia_affinis
ENSMZEG00005003889smarca4a9893.742ENSGACG00000006691smarca4a9893.742Gasterosteus_aculeatus
ENSMZEG00005003889smarca4a9980.480ENSGACG00000016033-9980.170Gasterosteus_aculeatus
ENSMZEG00005003889smarca4a10087.538ENSGAGG00000016757SMARCA410087.538Gopherus_agassizii
ENSMZEG00005003889smarca4a10087.348ENSGGOG00000009882SMARCA410087.652Gorilla_gorilla
ENSMZEG00005003889smarca4a10085.225ENSHBUG00000005447-9885.724Haplochromis_burtoni
ENSMZEG00005003889smarca4a10099.877ENSHBUG00000021172smarca4a10099.877Haplochromis_burtoni
ENSMZEG00005003889smarca4a10086.659ENSHGLG00000010519SMARCA410087.022Heterocephalus_glaber_female
ENSMZEG00005003889smarca4a10086.618ENSHGLG00100013774SMARCA410086.505Heterocephalus_glaber_male
ENSMZEG00005003889smarca4a9794.307ENSHCOG00000009510smarca4a9694.842Hippocampus_comes
ENSMZEG00005003889smarca4a9885.750ENSIPUG00000016346-9785.234Ictalurus_punctatus
ENSMZEG00005003889smarca4a10090.189ENSIPUG00000006107smarca4a10089.811Ictalurus_punctatus
ENSMZEG00005003889smarca4a10087.150ENSSTOG00000007939SMARCA410087.454Ictidomys_tridecemlineatus
ENSMZEG00005003889smarca4a10085.612ENSJJAG00000012877Smarca410085.313Jaculus_jaculus
ENSMZEG00005003889smarca4a10094.305ENSKMAG00000011931smarca4a10094.427Kryptolebias_marmoratus
ENSMZEG00005003889smarca4a10085.015ENSKMAG00000019518-9888.409Kryptolebias_marmoratus
ENSMZEG00005003889smarca4a9791.556ENSLBEG00000017383smarca4a9791.205Labrus_bergylta
ENSMZEG00005003889smarca4a9981.970ENSLBEG00000020655-9881.818Labrus_bergylta
ENSMZEG00005003889smarca4a5184.077ENSLACG00000015309SMARCA410083.454Latimeria_chalumnae
ENSMZEG00005003889smarca4a10087.079ENSLOCG00000007820smarca4a9987.170Lepisosteus_oculatus
ENSMZEG00005003889smarca4a10087.173ENSLAFG00000001433SMARCA410087.477Loxodonta_africana
ENSMZEG00005003889smarca4a10087.348ENSMFAG00000032146SMARCA49987.652Macaca_fascicularis
ENSMZEG00005003889smarca4a10087.348ENSMMUG00000012042SMARCA410087.652Macaca_mulatta
ENSMZEG00005003889smarca4a10087.333ENSMNEG00000028512SMARCA410087.637Macaca_nemestrina
ENSMZEG00005003889smarca4a10087.348ENSMLEG00000034976SMARCA410087.432Mandrillus_leucophaeus
ENSMZEG00005003889smarca4a10095.956ENSMAMG00000009256smarca4a10095.956Mastacembelus_armatus
ENSMZEG00005003889smarca4a9984.369ENSMAMG00000002841-9888.386Mastacembelus_armatus
ENSMZEG00005003889smarca4a9388.013ENSMZEG00005023861-9884.640Maylandia_zebra
ENSMZEG00005003889smarca4a10087.052ENSMAUG00000020731Smarca410087.234Mesocricetus_auratus
ENSMZEG00005003889smarca4a10087.173ENSMICG00000009806SMARCA410087.477Microcebus_murinus
ENSMZEG00005003889smarca4a10086.930ENSMOCG00000022209Smarca410087.112Microtus_ochrogaster
ENSMZEG00005003889smarca4a9883.396ENSMMOG00000008466-9882.817Mola_mola
ENSMZEG00005003889smarca4a9593.677ENSMMOG00000007571smarca4a9893.097Mola_mola
ENSMZEG00005003889smarca4a10086.296ENSMODG00000006287SMARCA410085.757Monodelphis_domestica
ENSMZEG00005003889smarca4a9695.486ENSMALG00000003388smarca4a10095.769Monopterus_albus
ENSMZEG00005003889smarca4a9084.236ENSMALG00000021534-9684.615Monopterus_albus
ENSMZEG00005003889smarca4a10087.142MGP_CAROLIEiJ_G0031879Smarca410087.386Mus_caroli
ENSMZEG00005003889smarca4a10087.142ENSMUSG00000032187Smarca410087.386Mus_musculus
ENSMZEG00005003889smarca4a10087.584MGP_PahariEiJ_G0014745Smarca410087.706Mus_pahari
ENSMZEG00005003889smarca4a10087.142MGP_SPRETEiJ_G0033003Smarca410087.386Mus_spretus
ENSMZEG00005003889smarca4a10087.272ENSMPUG00000005711SMARCA410087.576Mustela_putorius_furo
ENSMZEG00005003889smarca4a10087.515ENSMLUG00000004491-10087.203Myotis_lucifugus
ENSMZEG00005003889smarca4a10087.363ENSNGAG00000021852Smarca410087.485Nannospalax_galili
ENSMZEG00005003889smarca4a9084.384ENSNBRG00000018865-9985.585Neolamprologus_brichardi
ENSMZEG00005003889smarca4a9794.981ENSNBRG00000011457smarca4a9895.302Neolamprologus_brichardi
ENSMZEG00005003889smarca4a10081.984ENSNLEG00000012389SMARCA49485.156Nomascus_leucogenys
ENSMZEG00005003889smarca4a80100.000ENSOPRG00000000885-78100.000Ochotona_princeps
ENSMZEG00005003889smarca4a10085.358ENSODEG00000017127SMARCA410084.872Octodon_degus
ENSMZEG00005003889smarca4a10099.263ENSONIG00000008196smarca4a10099.263Oreochromis_niloticus
ENSMZEG00005003889smarca4a10085.405ENSONIG00000018040-9984.358Oreochromis_niloticus
ENSMZEG00005003889smarca4a9881.904ENSOCUG00000001787SMARCA49882.600Oryctolagus_cuniculus
ENSMZEG00005003889smarca4a10093.386ENSORLG00000015452smarca4a10093.386Oryzias_latipes
ENSMZEG00005003889smarca4a9584.950ENSORLG00000003955-9983.470Oryzias_latipes
ENSMZEG00005003889smarca4a10093.019ENSORLG00020004611smarca4a10093.448Oryzias_latipes_hni
ENSMZEG00005003889smarca4a9584.896ENSORLG00020009728-9983.417Oryzias_latipes_hni
ENSMZEG00005003889smarca4a10093.080ENSORLG00015016560smarca4a10093.448Oryzias_latipes_hsok
ENSMZEG00005003889smarca4a9984.498ENSORLG00015007739-9584.154Oryzias_latipes_hsok
ENSMZEG00005003889smarca4a9784.854ENSOMEG00000016626-9584.426Oryzias_melastigma
ENSMZEG00005003889smarca4a10094.301ENSOMEG00000007486smarca4a10094.301Oryzias_melastigma
ENSMZEG00005003889smarca4a9086.073ENSOGAG00000016148SMARCA410086.404Otolemur_garnettii
ENSMZEG00005003889smarca4a10087.339ENSOARG00000017454SMARCA49887.531Ovis_aries
ENSMZEG00005003889smarca4a10087.348ENSPPAG00000043191SMARCA410087.652Pan_paniscus
ENSMZEG00005003889smarca4a10087.234ENSPPRG00000000064SMARCA410087.538Panthera_pardus
ENSMZEG00005003889smarca4a7986.456ENSPTIG00000017447SMARCA410081.395Panthera_tigris_altaica
ENSMZEG00005003889smarca4a10087.348ENSPTRG00000010488SMARCA410087.652Pan_troglodytes
ENSMZEG00005003889smarca4a10087.454ENSPANG00000011042SMARCA49987.759Papio_anubis
ENSMZEG00005003889smarca4a10086.581ENSPKIG00000010087-9887.320Paramormyrops_kingsleyae
ENSMZEG00005003889smarca4a10089.726ENSPKIG00000007770SMARCA410090.453Paramormyrops_kingsleyae
ENSMZEG00005003889smarca4a10082.128ENSPSIG00000005547SMARCA410081.894Pelodiscus_sinensis
ENSMZEG00005003889smarca4a10086.930ENSPEMG00000020389Smarca410087.173Peromyscus_maniculatus_bairdii
ENSMZEG00005003889smarca4a10087.919ENSPCIG00000017138SMARCA410087.919Phascolarctos_cinereus
ENSMZEG00005003889smarca4a10091.626ENSPFOG00000007892smarca4a10092.415Poecilia_formosa
ENSMZEG00005003889smarca4a10084.684ENSPFOG00000012930-9984.399Poecilia_formosa
ENSMZEG00005003889smarca4a9887.823ENSPLAG00000018616-9887.705Poecilia_latipinna
ENSMZEG00005003889smarca4a10091.748ENSPLAG00000014294smarca4a10092.536Poecilia_latipinna
ENSMZEG00005003889smarca4a9592.278ENSPMEG00000003725smarca4a9692.907Poecilia_mexicana
ENSMZEG00005003889smarca4a9586.085ENSPMEG00000008929-9886.094Poecilia_mexicana
ENSMZEG00005003889smarca4a9991.125ENSPREG00000014608smarca4a10091.894Poecilia_reticulata
ENSMZEG00005003889smarca4a9585.472ENSPREG00000014823-9882.828Poecilia_reticulata
ENSMZEG00005003889smarca4a10085.271ENSPPYG00000009568SMARCA410085.391Pongo_abelii
ENSMZEG00005003889smarca4a7986.755ENSPCAG00000014054SMARCA47592.969Procavia_capensis
ENSMZEG00005003889smarca4a10087.393ENSPCOG00000023011SMARCA410087.538Propithecus_coquereli
ENSMZEG00005003889smarca4a9385.150ENSPVAG00000007787SMARCA49681.193Pteropus_vampyrus
ENSMZEG00005003889smarca4a9485.883ENSPNYG00000023995-9886.137Pundamilia_nyererei
ENSMZEG00005003889smarca4a9799.746ENSPNYG00000000717smarca4a9899.746Pundamilia_nyererei
ENSMZEG00005003889smarca4a9884.581ENSPNAG00000024136smarca4a9786.442Pygocentrus_nattereri
ENSMZEG00005003889smarca4a9587.404ENSPNAG00000006636-9387.895Pygocentrus_nattereri
ENSMZEG00005003889smarca4a10087.142ENSRNOG00000009271Smarca410087.386Rattus_norvegicus
ENSMZEG00005003889smarca4a10087.287ENSRBIG00000038696SMARCA49987.591Rhinopithecus_bieti
ENSMZEG00005003889smarca4a10087.287ENSRROG00000045509SMARCA410087.591Rhinopithecus_roxellana
ENSMZEG00005003889smarca4a9988.330ENSSBOG00000026896SMARCA49690.562Saimiri_boliviensis_boliviensis
ENSMZEG00005003889smarca4a10087.858ENSSHAG00000001642SMARCA410087.797Sarcophilus_harrisii
ENSMZEG00005003889smarca4a10090.970ENSSFOG00015013823smarca410090.514Scleropages_formosus
ENSMZEG00005003889smarca4a9685.442ENSSFOG00015009921-9491.159Scleropages_formosus
ENSMZEG00005003889smarca4a10094.171ENSSMAG00000003200smarca4a10094.353Scophthalmus_maximus
ENSMZEG00005003889smarca4a10082.346ENSSMAG00000014082-9982.556Scophthalmus_maximus
ENSMZEG00005003889smarca4a9986.560ENSSDUG00000005388-10084.298Seriola_dumerili
ENSMZEG00005003889smarca4a10091.331ENSSDUG00000017298smarca4a9992.637Seriola_dumerili
ENSMZEG00005003889smarca4a10096.413ENSSLDG00000024486smarca4a10096.413Seriola_lalandi_dorsalis
ENSMZEG00005003889smarca4a9488.721ENSSLDG00000023663-9788.721Seriola_lalandi_dorsalis
ENSMZEG00005003889smarca4a6296.894ENSSARG00000013477SMARCA48296.894Sorex_araneus
ENSMZEG00005003889smarca4a9584.419ENSSPUG00000004558SMARCA49885.029Sphenodon_punctatus
ENSMZEG00005003889smarca4a10084.273ENSSPAG00000012533-9983.774Stegastes_partitus
ENSMZEG00005003889smarca4a10095.805ENSSPAG00000004248smarca4a10095.805Stegastes_partitus
ENSMZEG00005003889smarca4a10087.477ENSSSCG00000013629SMARCA410087.599Sus_scrofa
ENSMZEG00005003889smarca4a9087.962ENSTRUG00000004885smarca4a10087.688Takifugu_rubripes
ENSMZEG00005003889smarca4a9583.281ENSTRUG00000001378SMARCA49884.244Takifugu_rubripes
ENSMZEG00005003889smarca4a10082.757ENSTNIG00000004536SMARCA49983.839Tetraodon_nigroviridis
ENSMZEG00005003889smarca4a7393.594ENSTNIG00000004859-10093.594Tetraodon_nigroviridis
ENSMZEG00005003889smarca4a10084.519ENSTTRG00000009519SMARCA410084.041Tursiops_truncatus
ENSMZEG00005003889smarca4a10087.333ENSUAMG00000014661SMARCA410087.637Ursus_americanus
ENSMZEG00005003889smarca4a9484.671ENSUMAG00000022005SMARCA49891.225Ursus_maritimus
ENSMZEG00005003889smarca4a10087.272ENSVVUG00000017820SMARCA49787.637Vulpes_vulpes
ENSMZEG00005003889smarca4a10082.523ENSXETG00000009355smarca49985.010Xenopus_tropicalis
ENSMZEG00005003889smarca4a9884.596ENSXCOG00000013494-9885.092Xiphophorus_couchianus
ENSMZEG00005003889smarca4a10085.096ENSXMAG00000007030-9885.850Xiphophorus_maculatus
ENSMZEG00005003889smarca4a10092.326ENSXMAG00000006321smarca4a10092.875Xiphophorus_maculatus

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